test(#1976): consolidate 17 agent regression tests into agent-contract suites

Fold 17 issue-named agent-markdown regression files into their canonical agent
suites: agent-frontmatter (shared agent-body-contract catch-all: read-loop guards,
retired-slash-ref bans, sycophancy hardening, doc-writer/code-fixer/review-fix/mapper
contracts, write-truncation), planner-language-regression (planner directive/grep/phase
contract), executor-mvp-tdd-section, verifier-behavior-unverified, intel, and
research-agent-profiles. Verbatim block-scoped describe wrappers; 98 subtests conserved
1:1. All unit (markdown-content) tests — no CLI/env surface. No new files.

Regenerates regression-name allowlist (222->207), ratchets file-count allowlist (intel
entry removed, phase 4->3), makes 13 relocated allow-test-rule exemptions issue-ref-
compliant (ADR-456; prunes stale ids). No CONTEXT.md/ADR refs named the moved files.
lint:ci green.

Part of epic #1969. Closes #1976.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

scripts/lint-allow-test-rule-refs.allowlist.json

@@ -17,28 +17,17 @@
   "tests/bug-131-release-tarball-smoke-explicit-home.test.cjs :: integration-test-input",
   "tests/bug-211-launcher-home-fallback.test.cjs :: structural/behavioral regression for the ~/.claude fallback arm in",
   "tests/bug-2136-sh-hook-version.test.cjs :: structural-regression-guard",
-  "tests/bug-214-phase-researcher-write-truncation-contract.test.cjs :: source-text-is-the-product",
-  "tests/bug-214-writer-agents-write-truncation-contract.test.cjs :: source-text-is-the-product",
-  "tests/bug-2346-agent-read-loop-guards.test.cjs :: source-text-is-the-product",
-  "tests/bug-2419-project-researcher-agent.test.cjs :: source-text-is-the-product",
-  "tests/bug-2421-planner-grep-gate-hygiene.test.cjs :: source-text-is-the-product",
   "tests/bug-2543-gsd-slash-namespace.test.cjs :: structural-regression-guard",
   "tests/bug-2559-stale-search-year.test.cjs :: source-text-is-the-product",
-  "tests/bug-2686-review-fix-worktree.test.cjs :: source-text-is-the-product",
   "tests/bug-2772-gitmodules-path-intersection.test.cjs :: source-text-is-the-product",
   "tests/bug-2808-skill-hyphen-name.test.cjs :: source-text-is-the-product",
   "tests/bug-2839-review-fix-transactional-cleanup.test.cjs :: source-text-is-the-product",
-  "tests/bug-2990-code-fixer-worktree-branch.test.cjs :: source-text-is-the-product",
-  "tests/bug-3097-3099-executor-worktree-path-safety.test.cjs :: reads markdown product files (gsd-executor.md, worktree-path-safety.md) to verify structural protocol — not source-grep",
-  "tests/bug-3290-intel-updater-layout-block.test.cjs :: source-text-is-the-product — agents/gsd-intel-updater.md IS",
   "tests/bug-33-settings-model-profile-adaptive.test.cjs :: source-text-is-the-product",
   "tests/bug-3384-secondary-defects.test.cjs :: source-text-is-the-product",
-  "tests/bug-3430-planner-phase-contract.test.cjs :: source-text-is-the-product",
   "tests/bug-3446-resume-continue-here-discovery.test.cjs :: source-text-is-the-product",
   "tests/bug-3491-nested-git-worktree.test.cjs :: source-text-is-the-product",
   "tests/bug-3523-cjs-loadconfig-branching-strategy-warning.test.cjs :: validates runtime CLI stdout/stderr warning behavior, not source grep",
   "tests/bug-3542-executor-git-stash-prohibition.test.cjs :: source-text-is-the-product",
-  "tests/bug-3605-stale-research-insert-phase-agent-refs.test.cjs :: source-text-is-the-product",
   "tests/bug-3677-agent-colon-namespace-leak.test.cjs :: source-text-is-the-product",
   "tests/bug-3678-executor-commit-docs-respect.test.cjs :: source-text-is-the-product",
   "tests/bug-3683-command-colon-namespace-leak.test.cjs :: source-text-is-the-product",
@@ -46,7 +35,6 @@
   "tests/bug-3689-resume-glob-nomatch.test.cjs :: source-text-is-the-product",
   "tests/bug-3810-no-gsd-sdk-runtime-refs.test.cjs :: source-text-is-the-product",
   "tests/bug-444-resolver-local-claude-install.test.cjs :: structural/behavioral regression for the repo-local .claude/ install",
-  "tests/bug-571-doc-writer-fix-mode-edit-only.test.cjs :: source-text-is-the-product",
   "tests/bug-619-codebase-drift-gate-shim.test.cjs :: source-text-is-the-product",
   "tests/bug-622-graphify-optional-graph-html.test.cjs :: source-text-is-the-product",
   "tests/bug-630-wave-cleanup-orchestrator-root.test.cjs :: source-text-is-the-product",
@@ -91,7 +79,6 @@
   "tests/edge-probe-spec-phase-contract.test.cjs :: runtime-contract-is-the-product — spec-phase.md Step 5.5 is the deployed workflow runtime contract under assertion",
   "tests/edit-phase.test.cjs :: source-text-is-the-product",
   "tests/enh-2380-sync-skills.test.cjs :: source-text-is-the-product",
-  "tests/enh-2500-codebase-mapper-arch-rich-format.test.cjs :: source-text-is-the-product",
   "tests/enh-2789-description-budget.test.cjs :: source-text-is-the-product",
   "tests/enh-2790-skill-consolidation.test.cjs :: source-text-is-the-product",
   "tests/enh-48-cwd-drift-guard-e2e.test.cjs :: integration-test-input",

scripts/lint-regression-test-names.allowlist.json

@@ -6,37 +6,24 @@
   "bug-21-state-md-template-frontmatter.test.cjs",
   "bug-211-launcher-home-fallback.test.cjs",
   "bug-2136-sh-hook-version.test.cjs",
-  "bug-214-phase-researcher-write-truncation-contract.test.cjs",
-  "bug-214-writer-agents-write-truncation-contract.test.cjs",
   "bug-2344-read-guard-claudecode-env.test.cjs",
-  "bug-2346-agent-read-loop-guards.test.cjs",
-  "bug-2351-intel-kilo-layout.test.cjs",
-  "bug-2419-project-researcher-agent.test.cjs",
-  "bug-2421-planner-grep-gate-hygiene.test.cjs",
   "bug-2451-context-monitor-over-report.test.cjs",
   "bug-2520-read-guard-hook-subprocess-env.test.cjs",
   "bug-2543-gsd-slash-namespace.test.cjs",
   "bug-2559-stale-search-year.test.cjs",
   "bug-260-worktree-path-guard.test.cjs",
   "bug-261-worktree-force-add-guard.test.cjs",
-  "bug-2686-review-fix-worktree.test.cjs",
   "bug-2772-gitmodules-path-intersection.test.cjs",
   "bug-2808-skill-hyphen-name.test.cjs",
   "bug-2839-review-fix-transactional-cleanup.test.cjs",
   "bug-2866-codex-strip-no-trailing-newline.test.cjs",
   "bug-2876-skill-frontmatter-quote.test.cjs",
   "bug-2916-handle-branching-default-base.test.cjs",
-  "bug-2990-code-fixer-worktree-branch.test.cjs",
   "bug-2995-post-install-script-paths.test.cjs",
   "bug-3019-help-passthrough.test.cjs",
   "bug-3054-stale-gsd-next-references.test.cjs",
-  "bug-3087-planner-directive-language.test.cjs",
-  "bug-3097-3099-executor-worktree-path-safety.test.cjs",
-  "bug-3290-intel-updater-layout-block.test.cjs",
   "bug-33-settings-model-profile-adaptive.test.cjs",
-  "bug-3321-verifier-runs-probes.test.cjs",
   "bug-3384-secondary-defects.test.cjs",
-  "bug-3430-planner-phase-contract.test.cjs",
   "bug-3442-shim-projection-drift-guard.test.cjs",
   "bug-3446-resume-continue-here-discovery.test.cjs",
   "bug-3491-nested-git-worktree.test.cjs",
@@ -44,7 +31,6 @@
   "bug-3523-cjs-loadconfig-branching-strategy-warning.test.cjs",
   "bug-3542-executor-git-stash-prohibition.test.cjs",
   "bug-3588-npm-audit-clean.test.cjs",
-  "bug-3605-stale-research-insert-phase-agent-refs.test.cjs",
   "bug-3668-workflow-runtime-resolution.test.cjs",
   "bug-3677-agent-colon-namespace-leak.test.cjs",
   "bug-3678-executor-commit-docs-respect.test.cjs",
@@ -53,7 +39,6 @@
   "bug-3689-resume-glob-nomatch.test.cjs",
   "bug-3810-no-gsd-sdk-runtime-refs.test.cjs",
   "bug-444-resolver-local-claude-install.test.cjs",
-  "bug-571-doc-writer-fix-mode-edit-only.test.cjs",
   "bug-619-codebase-drift-gate-shim.test.cjs",
   "bug-622-graphify-optional-graph-html.test.cjs",
   "bug-630-wave-cleanup-orchestrator-root.test.cjs",

scripts/lint-test-file-count.allowlist.json

@@ -21,15 +21,6 @@
       ],
       "issue": "622"
     },
-    "intel": {
-      "files": [
-        "bug-2351-intel-kilo-layout.test.cjs",
-        "bug-3290-intel-updater-layout-block.test.cjs",
-        "intel-command-cutover.test.cjs",
-        "intel.test.cjs"
-      ],
-      "issue": "TBD"
-    },
     "milestone": {
       "files": [
         "milestone-archive.test.cjs",
@@ -40,14 +31,6 @@
       ],
       "issue": "TBD"
     },
-    "phase": {
-      "files": [
-        "bug-214-phase-researcher-write-truncation-contract.test.cjs",
-        "phase-dependency-levels.test.cjs",
-        "phase.test.cjs"
-      ],
-      "issue": "597"
-    },
     "roadmap": {
       "files": [
         "roadmap-mode-field.test.cjs",