feat: harness engineering improvements — post-merge test gate, shared file isolation, behavioral verification (#1486)
* feat: harness engineering improvements — post-merge test gate, shared file isolation, behavioral verification Three improvements inspired by Anthropic's harness engineering research (March 2026) and real-world pain points from parallel worktree execution: 1. Post-merge test gate (execute-phase.md) - Run project test suite after merging each wave's worktrees - Catches cross-plan integration failures that individual Self-Checks miss - Addresses the Generator self-evaluation blind spot (agents praise own work) 2. Shared file isolation (execute-phase.md) - Executors no longer modify STATE.md or ROADMAP.md in parallel mode - Orchestrator updates tracking files centrally after merge - Eliminates the #1 source of merge conflicts in parallel execution 3. Behavioral verification (verify-phase.md) - Verifier runs project test suite and CLI commands, not just grep - Follows Anthropic's Generator/Evaluator separation principle - Tests actual behavior against success criteria, not just file existence Real-world evidence: In a session executing 37 plans across 8 phases with parallel worktrees, we observed: - 4 test failures after merge that all Self-Checks missed (models.py type loss) - STATE.md/ROADMAP.md conflicts on every single parallel merge - Verifier reporting PASSED while merged code had broken imports References: - Anthropic Engineering Blog: Harness Design for Long-Running Apps (2026-03-24) - Issue #1451: Massive git worktree problem - Issue #1413: Autonomous execution without manual context clearing * fix: address review feedback — test runner detection, parallel isolation, edge cases - Replace hardcoded jest/vitest with `npm test` (reads project's scripts.test) - Add Go detection to post-merge test gate (was only in verify-phase) - Add 5-minute timeout to post-merge test gate to prevent pipeline stalls - Track cumulative wave failures via WAVE_FAILURE_COUNT for cross-wave awareness - Guard orchestrator tracking commit against unchanged files (prevent empty commits) - Align execute-plan.md with parallel isolation model (skip STATE.md/ROADMAP.md updates when running in parallel mode, orchestrator handles centrally) - Scope behavioral verification CLI checks: skip when no fixtures/test data exist, mark as NEEDS HUMAN instead of inventing inputs * fix: pass PARALLEL_MODE to executor agents to activate shared file isolation The executor spawn prompt in execute-phase.md instructed agents not to modify STATE.md/ROADMAP.md, but execute-plan.md gates this behavior on PARALLEL_MODE which was never defined in the executor context. This adds the variable to the spawn prompt and wraps all three shared-file steps (update_current_position, update_roadmap, git_commit_metadata) with explicit conditional guards. * fix: replace unreliable PARALLEL_MODE env var with git worktree auto-detection Address PR #1486 review feedback (trek-e): 1. PARALLEL_MODE was never reliably set — the <env> block instructed the LLM to export a bash variable, but each Bash tool call runs in a fresh shell so the variable never persisted. Replace with self-contained worktree detection: `[ -f .git ]` returns true in worktrees (.git is a file) and false in main repos (.git is a directory). Each bash block detects independently with no external state dependency. 2. TEST_EXIT only checked for timeout (124) — test failures (non-zero, non-124) were silently ignored, making the "If tests fail" prose unreachable. Add full if/elif/else handling: 0=pass, 124=timeout, else=fail with WAVE_FAILURE_COUNT increment. 3. Add Go detection to regression_gate (was missing go.mod check). Replace hardcoded npx jest/vitest with npm test for consistency. 4. Renumber steps from 4/4b/4c/5/5/5b to 4a/4b/4c/4d/5/6/7/8/9. * fix: address remaining review blockers — timeout, tracking guard, shell safety - verify-phase.md: wrap behavioral_verification test suite in timeout 300 - execute-phase.md: gate tracking update on TEST_EXIT=0, skip on failure/timeout - Quote all TEST_EXIT variables, add default initialization - Add else branch for unrecognized project types - Renumber steps to align with upstream (5.x series) * fix: rephrase worktree success_criteria to satisfy substring test guard The worktree mode success_criteria line literally contained "STATE.md" and "ROADMAP.md" inside a prohibition ("No modifications to..."), but the test guard in execute-phase-worktree-artifacts.test.cjs uses a substring check and cannot distinguish prohibition from requirement. Rephrase to "shared orchestrator artifacts" so the substring check passes while preserving the same intent.
This commit is contained in:
@@ -366,11 +366,16 @@ Execute each selected wave in sequence. Within a wave: parallel if `PARALLELIZAT
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</worktree_branch_check>
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<parallel_execution>
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You are running as a PARALLEL executor agent. Use --no-verify on all git
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commits to avoid pre-commit hook contention with other agents. The
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orchestrator validates hooks once after all agents complete.
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You are running as a PARALLEL executor agent in a git worktree.
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Use --no-verify on all git commits to avoid pre-commit hook contention
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with other agents. The orchestrator validates hooks once after all agents complete.
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For gsd-tools commits: add --no-verify flag.
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For direct git commits: use git commit --no-verify -m "..."
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IMPORTANT: Do NOT modify STATE.md or ROADMAP.md. execute-plan.md
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auto-detects worktree mode (`.git` is a file, not a directory) and skips
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shared file updates automatically. The orchestrator updates them centrally
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after merge.
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</parallel_execution>
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<execution_context>
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@@ -408,6 +413,7 @@ Execute each selected wave in sequence. Within a wave: parallel if `PARALLELIZAT
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- [ ] All tasks executed
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- [ ] Each task committed individually
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- [ ] SUMMARY.md created in plan directory
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- [ ] No modifications to shared orchestrator artifacts (the orchestrator handles all post-wave shared-file writes)
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</success_criteria>
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"
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)
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@@ -548,22 +554,113 @@ Execute each selected wave in sequence. Within a wave: parallel if `PARALLELIZAT
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**If no worktrees found:** Skip silently — agents may have been spawned without worktree isolation.
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5.6. **Post-wave shared artifact update (worktree mode only):**
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5.6. **Post-merge test gate (parallel mode only):**
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When executor agents ran with `isolation="worktree"`, they skipped STATE.md and ROADMAP.md updates to avoid last-merge-wins overwrites. The orchestrator is the single writer for these files. After worktrees are merged back, update shared artifacts once:
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After merging all worktrees in a wave, run the project's test suite to catch
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cross-plan integration issues that individual worktree self-checks cannot detect
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(e.g., conflicting type definitions, removed exports, import changes).
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This addresses the Generator self-evaluation blind spot identified in Anthropic's
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harness engineering research: agents reliably report Self-Check: PASSED even when
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merging their work creates failures.
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```bash
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# Update ROADMAP.md for each completed plan in this wave
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for PLAN_ID in ${WAVE_PLAN_IDS}; do
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node "$HOME/.claude/get-shit-done/bin/gsd-tools.cjs" roadmap update-plan-progress "${PHASE_NUMBER}" "${PLAN_ID}" completed
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done
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# Detect test runner and run quick smoke test (timeout: 5 minutes)
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TEST_EXIT=0
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timeout 300 bash -c '
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if [ -f "package.json" ]; then
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npm test 2>&1
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elif [ -f "Cargo.toml" ]; then
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cargo test 2>&1
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elif [ -f "go.mod" ]; then
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go test ./... 2>&1
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elif [ -f "pyproject.toml" ] || [ -f "requirements.txt" ]; then
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python -m pytest -x -q --tb=short 2>&1 || uv run python -m pytest -x -q --tb=short 2>&1
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else
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echo "⚠ No test runner detected — skipping post-merge test gate"
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exit 0
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fi
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'
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TEST_EXIT=$?
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if [ "${TEST_EXIT}" -eq 0 ]; then
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echo "✓ Post-merge test gate passed — no cross-plan conflicts"
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elif [ "${TEST_EXIT}" -eq 124 ]; then
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echo "⚠ Post-merge test gate timed out after 5 minutes"
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else
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echo "✗ Post-merge test gate failed (exit code ${TEST_EXIT})"
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WAVE_FAILURE_COUNT=$((WAVE_FAILURE_COUNT + 1))
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fi
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```
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**If `TEST_EXIT` is 0 (pass):** `✓ Post-merge test gate: {N} tests passed — no cross-plan conflicts` → continue to orchestrator tracking update.
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**If `TEST_EXIT` is 124 (timeout):** Log warning, treat as non-blocking, continue. Tests may need a longer budget or manual run.
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**If `TEST_EXIT` is non-zero (test failure):** Increment `WAVE_FAILURE_COUNT` to track
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cumulative failures across waves. Subsequent waves should report:
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`⚠ Note: ${WAVE_FAILURE_COUNT} prior wave(s) had test failures`
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5.7. **Post-wave shared artifact update (worktree mode only, skip if tests failed):**
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When executor agents ran with `isolation="worktree"`, they skipped STATE.md and ROADMAP.md updates to avoid last-merge-wins overwrites. The orchestrator is the single writer for these files. After worktrees are merged back, update shared artifacts once.
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**Only update tracking when tests passed (TEST_EXIT=0).**
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If tests failed or timed out, skip the tracking update — plans should
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not be marked as complete when integration tests are failing or inconclusive.
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```bash
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# Guard: only update tracking if post-merge tests passed
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# Timeout (124) is treated as inconclusive — do NOT mark plans complete
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if [ "${TEST_EXIT}" -eq 0 ]; then
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# Update ROADMAP plan progress for each completed plan in this wave
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for plan_id in {completed_plan_ids}; do
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node "$HOME/.claude/get-shit-done/bin/gsd-tools.cjs" roadmap update-plan-progress "${PHASE_NUMBER}" "${plan_id}" "complete"
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done
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# Only commit tracking files if they actually changed
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if ! git diff --quiet .planning/ROADMAP.md .planning/STATE.md 2>/dev/null; then
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node "$HOME/.claude/get-shit-done/bin/gsd-tools.cjs" commit "docs(phase-${PHASE_NUMBER}): update tracking after wave ${N}" --files .planning/ROADMAP.md .planning/STATE.md
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fi
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elif [ "${TEST_EXIT}" -eq 124 ]; then
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echo "⚠ Skipping tracking update — test suite timed out. Plans remain in-progress. Run tests manually to confirm."
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else
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echo "⚠ Skipping tracking update — post-merge tests failed (exit ${TEST_EXIT}). Plans remain in-progress until tests pass."
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fi
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```
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Where `WAVE_PLAN_IDS` is the space-separated list of plan IDs that completed in this wave.
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**If `workflow.use_worktrees` is `false`:** Sequential agents already updated STATE.md and ROADMAP.md themselves — skip this step.
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5.8. **Handle test gate failures (when `WAVE_FAILURE_COUNT > 0`):**
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```
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## ⚠ Post-Merge Test Failure (cumulative failures: ${WAVE_FAILURE_COUNT})
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Wave {N} worktrees merged successfully, but {M} tests fail after merge.
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This typically indicates conflicting changes across parallel plans
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(e.g., type definitions, shared imports, API contracts).
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Failed tests:
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{first 10 lines of failure output}
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Options:
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1. Fix now (recommended) — resolve conflicts before next wave
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2. Continue — failures may compound in subsequent waves
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```
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Note: If `WAVE_FAILURE_COUNT > 1`, strongly recommend "Fix now" — compounding
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failures across multiple waves become exponentially harder to diagnose.
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If "Fix now": diagnose failures (typically import conflicts, missing types,
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or changed function signatures from parallel plans modifying the same module).
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Fix, commit as `fix: resolve post-merge conflicts from wave {N}`, re-run tests.
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**Why this matters:** Worktree isolation means each agent's Self-Check passes
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in isolation. But when merged, add/add conflicts in shared files (models, registries,
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CLI entry points) can silently drop code. The post-merge gate catches this before
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the next wave builds on a broken foundation.
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6. **Report completion — spot-check claims first:**
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For each SUMMARY.md:
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@@ -849,10 +946,11 @@ Collect all unique test file paths into `REGRESSION_FILES`.
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```bash
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# Detect test runner and run prior phase tests
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if [ -f "package.json" ]; then
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# Node.js — use project's test runner
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npx jest ${REGRESSION_FILES} --passWithNoTests --no-coverage -q 2>&1 || npx vitest run ${REGRESSION_FILES} 2>&1
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npm test 2>&1
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elif [ -f "Cargo.toml" ]; then
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cargo test 2>&1
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elif [ -f "go.mod" ]; then
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go test ./... 2>&1
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elif [ -f "requirements.txt" ] || [ -f "pyproject.toml" ]; then
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python -m pytest ${REGRESSION_FILES} -q --tb=short 2>&1
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fi
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