chore(#1671): migrate the remaining 13 LARGE/XL workflows to the fragment model — Phase 6.3 (#3030)

* chore(#2994): fragmentize progress.md forensic audit onto the fragment model

Extract the --forensic-gated forensic_audit step to
workflows/progress/steps/forensic-audit.md behind a section marker, and
repair progress.md's init line to forward --forensic so the atom is
actually true in production rather than only under direct CLI tests.

progress.md shrinks 32630 -> 27207 bytes.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* chore(#2994): fragmentize the four manifest-wired workflows

new-project, quick, new-milestone and progress each already had a
dedicated cmdInit* entry point but zero marked sections. Extract nine
gated bodies to workflows/<wf>/steps/ behind section markers and repair
each init line to forward its flags.

Fold --full into the discuss/research/validate facts inside cmdInitQuick
so the when= grammar never sees an OR, per the chunked-mode precedent.

Fixes found while working, per the no-defer rule:
- cmdInitProgress passed no phase info to buildSectionManifestField, so
  state:phase-mvp-mode was permanently false — an atom in the vocabulary
  whose fact could never be computed.
- the quick init router folded flag tokens into the free-text
  description, which the new forwarding would have corrupted.
- a #2508 dispatch note was nested inside quick.md's Agent(prompt=)
  fence, leaking orchestrator guidance into the subagent prompt.
- progress.md had a 3-vs-4 backtick outer-fence imbalance.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* chore(#2994): fragmentize verify-work.md and admit state:ui-phase-active

Wire cmdInitVerifyWork to buildSectionManifestField — it was a dedicated
entry point that never emitted a manifest — and mark two sections.

state:ui-phase-active folds (plan:pre hooks include an active ui step) OR
(the phase dir holds a *-UI-SPEC.md) into one boolean in init.cts, so the
grammar still sees a single operator-free atom. The inner Playwright-MCP
check stays as prose inside the fragment: it is live session state and no
init seam can precompute it.

The MVP false-branch note is a real fallback, not redundant prose, so it
sits outside the marker — gating it away would delete the text needed
precisely when MVP mode is off.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* test(#2994): follow moved workflow content in drift guards

Retarget every guard that asserted on content this branch moved into
workflows/<wf>/steps/, mirroring 815b3d897. Each retargeted assertion was
verified to still fail when its step file is blanked, so none was
weakened into vacuity.

Three assertions in verify-mvp-uat were genuinely red. Three more were
worse than red — passing for the wrong reason:
- quick-commit-boundary and worktree-cleanup anchored on indexOf('Step
  5.6'), which matched a later cross-reference and sliced 16069 chars
  that coincidentally held the asserted substrings. Replaced with an
  expandWorkflowSections helper that splices step content back in place.
- phase6-review-capabilities lost its end boundary and widened to EOF.
- playwright-ui-verify matched 'UI' in an unrelated bullet and 'fall
  back' in a subagent-dispatch line after the real content moved.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* chore(#2994): fragmentize code-review and complete-milestone, admit three atoms

Add dedicated cmdInitCodeReview and cmdInitCompleteMilestone entry points
alongside the shared generic ones rather than modifying them — init.phase-op
and init.manager carry a CRITICAL blast radius (179 dependents, 24
processes) and stay byte-identical for their other callers.

Admit flag:--fix, state:fallow-enabled and state:git-create-tag, each with
a consuming section and a fact its own entry point computes.

Both sections had the resolver-in-body hazard: the fallow config-gate and
the git.create_tag check each sat inside the very block being gated, so
gating would have disabled the resolver that decides the gate. Both are
hoisted into init and the bodies now consume the resolved fact.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* test(#2994): retarget code-review and milestone drift guards, fix two red tests

Retarget guards that asserted on content moved into steps/, proving
non-vacuity by blanking each step file and confirming failure.

Also fixes two genuinely red tests found while working, per the no-defer
rule:
- workflow-fragments' frozen-vocabulary lock was missing
  state:ui-phase-active, so commit 7ef7f8336 shipped red. Lint and build
  both passed over it, which is why neither is sufficient verification.
- code-review's quick.md capability-hook assertion carried a stale
  delimiter after the 18ff35d20 extraction.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* chore(#2994): fragmentize autonomous.md and admit state:plan-strategy-converge

Five sections share one atom, the pattern plan-phase already uses for
flag:--research-phase. The atom folds --converge OR --cross-ai into a
single boolean in cmdInitAutonomous so the grammar stays operator-free.

cmdInitAutonomous is additive; init.milestone-op, init.manager and
init.phase-op are untouched and still consumed. The $PLAN_STRATEGY bash
resolver is deliberately retained — ungated local-planning bullets still
read it, so the init-side fact supplements it rather than replacing it.

converge-fail-fast required splitting one bash fence so the always-run
CONVERGENCE_ARGS construction stays outside the marker. All three
flag-absent fallbacks were left outside their markers.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* chore(#2994): fragmentize review and discuss-phase-assumptions

Admit state:reviewer-instances-configured (two peripheral notes share it;
the core reviewer-lane dispatch stays unmarked — it is the workflow's
primary always-evaluated logic, not an optional branch) and
state:auto-advance-active, which folds --auto OR two config keys into one
boolean so the grammar stays operator-free.

discuss-phase-assumptions was the highest-risk edit in this PR. Its
auto_advance step is a full if/elif/else; gating it whole would have
deleted the flag-absent fallback needed exactly when --auto is off. Split
verified exact: resolvers 636-651 and the 'End here' fallback 668-669 both
stay outside the marker; only 653-667 is gated.

Adds emitted-drift acks for the two files that grew — review.md (+55 B)
and autonomous.md (+737 B from 80799211c, which had none and would have
red-gated the push.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* chore(#2994): fragmentize docs-update, update, transition and new-milestone Part A

Completes the 13-workflow rollout. Three of these had no init call at all
and gained a dedicated entry point plus their first gsd_run query line.

Admits state:is-monorepo and adds state:next-channel, state:workstream-active
and state:flat-mode. Vocabulary 26 -> 30 atoms.

Part A of new-milestone applies when NO workstream is active — the negation
of state:workstream-active. Rather than teach the grammar negation, which is
the Greenspun drift the frozen list exists to prevent, it gets a separate
positively-phrased atom whose fact is the inverse. Part B, which always runs,
stays outside the marker.

flag:--verify-only is deliberately NOT admitted: docs-update has no
contiguous purely-additive region for it, and an atom without a consuming
section is dead vocabulary. Evidence recorded in the slice report.

update.md reuses its existing resolved $GSD_TOOLS rather than prepending the
canonical preamble, which would have clobbered it.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* fix(#2994): stop automated-ui-verification re-resolving its own gate, retire dead vocabulary

Two defects the new tests caught.

The automated-ui-verification step re-ran gsd_run loop render-hooks and
recomputed UI_PHASE_ACTIVE inside a body that is only read when that fact
is already true — the circular self-disabling pattern this design forbids,
introduced by 3c654b168. cmdInitVerifyWork now exposes ui_phase_active and
the step consumes it. Its launcher preamble goes too: no gsd_run remains.
The Playwright-MCP check stays as prose — that is live session state.

Dead vocabulary predating this PR: flag:--full and state:needs-codebase-map
were admitted with a gate-1 claim that never materialized. flag:--full is
removed, redundant once quick folds it into discuss/research/validate.
state:needs-codebase-map gets the real consumer it always lacked, gating
new-project's codebase-map offer. Vocabulary 30 -> 29, and no atom is now
without a consuming section.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* test(#2994): add the atom-admission, inversion and resolver-hoist gates

The two existing parity guards prove vocabulary/predicate symmetry but
never that a fact is computed — an atom no cmdInit* assembles evaluates
false forever. These close that hole:

- per-atom satisfiability for all 29 atoms, plus an anti-vacuity assertion
  so the loop cannot silently cover zero atoms
- dead-vocabulary check against the shipped manifest
- inversion guard: the flag-absent fallbacks in discuss-phase-assumptions
  and verify-work must stay outside their markers
- data-driven resolver-hoist guard over the shipped manifest, so a future
  extraction cannot reintroduce the circular class
- compound-fold coverage (--full, --cross-ai, --rc, config-only --auto)
- null-vs-[] degraded/computed distinction, and flag value shapes

Also repairs the frozen-vocabulary lock, which was stale and red for the
seven atoms earlier commits on this branch shipped.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* docs(#2994): add changeset for the fragment-model rollout

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* test(#2994): cite the issue on the two new allow-test-rule exemptions

ADR-456 requires an issue ref on the same line as the annotation.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* docs(#2994): correct the atom-count claims after retiring flag:--full

The vocabulary doc comments still said 30 entries; it is 29 since
flag:--full was removed as dead vocabulary.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* fix(#2994): dedupe the phase-fallback block and harden --ws parsing

Review findings.

MAJOR: the three new init entry points each pasted a verbatim copy of the
guardedFindPhase/guardedGetRoadmapPhase fallback, taking the repo from four
copies to seven — DEFECT.GENERATIVE-FIX. Extracted applyRoadmapFallback and
folded six of the seven; each call site keeps its own field-set via a
closure. Duplication removed rather than papered over with a parity test.
cmdInitPhaseOp stays out: its fallback omits has_reviews, so it is not a
byte-identical copy, and it is CRITICAL-radius.

LOW, pre-existing: GSD_WS captured [^[:space:]]+ and expands unquoted, so a
workstream name holding glob metacharacters would expand against the
filesystem. Narrowed to [A-Za-z0-9._-]+. The unquoted expansion is kept —
it must word-split into two args and vanish when empty.

Also restores the vocabulary ordering convention, and fixes a masked test
bug the mandated run surfaced: the flag-forwarding guard checked only the
first init line per workflow, but new-milestone has two, so a real failure
was reporting exit 0.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* fix(#2994): drop the stale new-milestone emitted-drift ack

new-milestone.md was acked for a +406 B growth measured against an
intermediate commit. Net against origin/next it SHRANK by 8 bytes, so
nothing needed the ack and it explained nothing — which the differential
attribution check reports as a stale acknowledgment, not a pass.

update.md's entry stays: it genuinely grew +703 B.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* fix(#2994): resolve the 15 failures from the full matrix run

All 15 were real and identical on both lanes.

REAL REGRESSION: autonomous.md hit 41479 chars against the #2196 guard's
40960 cap — a CHARS cap distinct from the LARGE tier byte cap, which the
five section stubs pushed it over. Extracted the 3a.5 UI Design Contract
body to references/; now 39968 chars, and the file nets -795 B vs base, so
its growth ack is deleted rather than left stale.

REAL DEFECT: docs referenced /gsd-transition, which is not a live
registered command. Reworded.

STALE FIXTURE: the emission byte-identity test hardcoded two marked
workflows; this branch legitimately marks fifteen. Fixture corrected — the
source was right.

The rest were drift guards over the eight workflows the earlier sweep did
not cover, retargeted at where the content now lives with non-vacuity
proven by blanking each step file and confirming failure. The GSD_WS
forwarding guard was checked as a possible real break and is not one: the
charclass narrowing is intact and forwarding works end to end.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* fix(#2994): drop the ack for a newly-added reference file

A new file's emitted ripple is attributable to the diff that adds it, so
the acknowledgment explained nothing and the differential check reports it
as stale. Removing the last entry removes the fragment — an empty one
signals nothing.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* fix(#2994): retarget the UI-contract guards and clear two transitive advisories

The §3a.5 extraction that brought autonomous.md under the #2196 char cap
moved its body to references/autonomous-ui-design-contract.md, so ten
guards in autonomous-ui-steps and check-ui-safety-gate were asserting it
against the host. Retargeted via a combined read, each proven non-vacuous
by blanking the reference file and confirming failure.

This class had already bitten twice on this branch because each sweep was
scoped to the workflows touched at that moment, so this one was
exhaustive: ~70 test files across all 13 workflows, zero further broken or
vacuous assertions found.

Also clears two high transitive advisories the matrix flagged on one lane
— fast-uri GHSA-7p8r-x3mc-p8w7 and three ip-address SSRF/trust-boundary
issues. Both pre-date this branch: package-lock.json was untouched until
now, so the production tree was byte-identical to the base. Lockfile-only,
package.json unchanged, verified against a real npm ci install.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>

* chore(#2994): backfill changeset pr number to 3030

---------

Co-authored-by: sim <sim@local>
Co-authored-by: Claude Opus 5 (1M context) <noreply@anthropic.com>
This commit is contained in:
Tom Boucher
2026-08-03 19:59:58 -04:00
committed by GitHub
parent c6ce4d1d9a
commit ff4a57b78c
106 changed files with 4971 additions and 1474 deletions

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<step name="forensic_audit">
**Forensic Integrity Audit** — only runs when `--forensic` is present in ARGUMENTS.
If `--forensic` is NOT present in ARGUMENTS: skip this step entirely. Default progress behavior (standard report + routing) is unchanged.
If `--forensic` IS present: after the standard report and routing suggestion have been displayed, append the following audit section.
---
## Forensic Integrity Audit
Running 7 deep checks against project state...
Run each check in order. For each check, emit ✓ (pass) or ⚠ (warning) with concrete evidence when a problem is found.
**Check 1 — STATE vs artifact consistency**
Read STATE.md `status` / `stopped_at` fields (from the STATE snapshot already loaded). Compare against the artifact count from the roadmap analysis. If STATE.md claims the current phase is pending/mid-flight but the artifact count shows it as complete (all PLAN.md files have matching SUMMARY.md files), flag inconsistency. Emit:
- ✓ `STATE.md consistent with artifact count` — if both agree
- ⚠ `STATE.md claims [status] but artifact count shows phase complete` — with the specific values
**Check 2 — Orphaned handoff files**
Check for existence of:
```bash
ls .planning/HANDOFF.json .planning/phases/*/.continue-here.md .planning/phases/*/*HANDOFF*.md 2>/dev/null || true
```
Also check `.planning/continue-here.md`.
Emit:
- ✓ `No orphaned handoff files` — if none found
- ⚠ `Orphaned handoff files found` — list each file path, add: `→ Work was paused mid-flight. Read the handoff before continuing.`
**Check 3 — Deferred scope drift**
Search phase artifacts (CONTEXT.md, DISCUSSION-LOG.md, BUG-BRIEF.md, VERIFICATION.md, SUMMARY.md, HANDOFF.md files under `.planning/phases/`) for patterns:
```bash
grep -rl "defer to Phase\|future phase\|out of scope Phase\|deferred to Phase" .planning/phases/ 2>/dev/null || true
```
For each match, extract the referenced phase number. Cross-reference against ROADMAP.md phase list. If the referenced phase number is NOT in ROADMAP.md, flag as deferred scope not captured.
Emit:
- ✓ `All deferred scope captured in ROADMAP` — if no mismatches
- ⚠ `Deferred scope references phase(s) not in ROADMAP` — list: file, reference text, missing phase number
**Check 4 — Memory-flagged pending work**
Check if `.planning/MEMORY.md` or `.planning/memory/` exists:
```bash
ls .planning/MEMORY.md .planning/memory/*.md 2>/dev/null || true
```
If found, grep for entries containing: `pending`, `status`, `deferred`, `not yet run`, `backfill`, `blocking`.
Emit:
- ✓ `No memory entries flagging pending work` — if none found or no MEMORY.md
- ⚠ `Memory entries flag pending/deferred work` — list the matching lines (max 5, truncated at 80 chars)
**Check 5 — Blocking operational todos**
Check for pending todos:
```bash
ls .planning/todos/pending/*.md 2>/dev/null || true
```
For files found, scan for keywords indicating operational blockers: `script`, `credential`, `API key`, `manual`, `verification`, `setup`, `configure`, `run `.
Emit:
- ✓ `No blocking operational todos` — if no pending todos or none match operational keywords
- ⚠ `Blocking operational todos found` — list the file names and matching keywords (max 5)
**Check 6 — Uncommitted code**
```bash
git status --porcelain 2>/dev/null | grep -v "^??" | grep -v "^.planning\/" | grep -v "^\.\." | head -10
```
If output is non-empty (modified/staged files outside `.planning/`), flag as uncommitted code.
Emit:
- ✓ `Working tree clean` — if no modified files outside `.planning/`
- ⚠ `Uncommitted changes in source files` — list up to 10 file paths
**Check 7 — Unresolved deferred items**
Glob every phase directory's SCOPE BOUNDARY log (executor writes out-of-scope discoveries here per `agents/gsd-executor.md`):
```bash
ls .planning/phases/*/deferred-items.md 2>/dev/null || true
```
For each `deferred-items.md` found, read its entries (bullet list, one entry per top-level `- ` line, continuation lines indented beneath it). An entry is RESOLVED only if it carries an explicit `status: resolved` field (case-insensitive) on one of its lines; every other entry — including one with no `status:` field at all — is UNRESOLVED and must be surfaced (fail-safe: never silently drop a possibly-open item).
Emit:
- ✓ `No unresolved deferred items` — if no `deferred-items.md` files exist, or every entry in every file is `status: resolved`
- ⚠ `Unresolved deferred items found` — list each file's phase directory and its unresolved entry text (max 5 per file, truncated at 80 chars)
---
After all 7 checks, display the verdict:
**If all 7 checks passed:**
```
### Verdict: CLEAN
The standard progress report is trustworthy — proceed with the routing suggestion above.
```
**If 1 or more checks failed:**
```
### Verdict: N INTEGRITY ISSUE(S) FOUND
The standard progress report may not reflect true project state.
Review the flagged items above before acting on the routing suggestion.
```
Then for each failed check, add a concrete next action:
- Check 2 (orphaned handoff): `Read the handoff file(s) and resume from where work was paused: /gsd:resume-work ${GSD_WS}`
- Check 3 (deferred scope): `Add the missing phases to ROADMAP.md or update the deferred references`
- Check 4 (memory pending): `Review the flagged memory entries and resolve or clear them`
- Check 5 (blocking todos): `Complete the operational steps in .planning/todos/pending/ before continuing`
- Check 6 (uncommitted code): `Commit or stash the uncommitted changes before advancing`
- Check 7 (unresolved deferred items): `Address each deferred item and mark it status: resolved in its deferred-items.md, or fold it into the roadmap`
- Check 1 (STATE inconsistency): `Run /gsd:verify-work ${PHASE} ${GSD_WS} to reconcile state`
</step>

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<step name="mvp_display">
**MVP-mode display (when phase has `**Mode:** mvp` in ROADMAP.md).**
`init.progress` already resolved `phase_mvp_mode` for the current phase (progress has no `--mvp` CLI flag — mode is inherited from the planned phase), and this step is only read at all when that same fact is `true` (`section_manifest`'s `mvp-display` inclusion gates on it) — so there is no need to re-resolve `MVP_MODE` here via a fresh `gsd_run query phase.mvp-mode` call; that would gate this section on a fact its own body recomputes, which is circular and self-disabling. Simply consume `$phase_mvp_mode` (already extracted from init JSON in `init_context`) as `true` for the remainder of this step.
The per-phase progress block adds a **user-flow status** sub-block sourced from the phase's PLAN.md task names. Each task whose name reads like a user-visible capability (e.g., "Register flow", "Login flow", "Password reset") is rendered as a status line:
```
Phase 1 — User Auth MVP
✅ Walking Skeleton complete ← from SKELETON.md existence
✅ Register flow working ← from PLAN.md task with summary
✅ Login flow working ← from PLAN.md task with summary
🔄 Password reset (in progress) ← from PLAN.md task without summary
⬜ Email verification ← from PLAN.md task not yet started
```
**User-flow filter:** Tasks whose names are technical-sounding ("Wire DB schema", "Create migration", "Bump deps") are NOT rendered as user-flow status lines. Heuristic: a task name is user-flow-shaped if it ends in "flow", "page", "screen", or starts with a verb the user would recognize ("Register", "Login", "Upload", "View"). Tasks that fail the heuristic still count toward the standard task progress total but don't appear in the user-flow sub-block.
</step>