Commit Graph

39 Commits

Author SHA1 Message Date
Tom Boucher
9e6c404151 chore: merge release v1.4.0 to main (#884)
* fix(#663): resolve open CodeQL/Dependabot security alerts (ReDoS, prototype pollution, workflow perms, qs DoS) (#665)

* fix(#663): resolve open CodeQL/Dependabot security alerts

- ReDoS: collapse ambiguous nested quantifiers in phase-heading regexes
  (verify/validate/commands) and the plan-filename lookahead (phase) to
  provably-equivalent non-backtracking forms
- prototype pollution: guard __proto__/constructor/prototype in setConfigValue
- remove dead no-op .replace(/-/g,'-') in phase.cts
- escape all regex metachars in bug-2839 test
- add contents:read permissions to security-scan + install-smoke workflows
- pin qs >= 6.15.2 via overrides (DoS GHSA)
- broaden prompt-injection allowlist to translated security-model docs

Closes #663

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* test(#663): regression tests for prototype-pollution guard and roadmap-phase ReDoS

Behavioral test that config-set rejects __proto__/constructor/prototype keys
without polluting Object.prototype, plus a ReDoS guard (timing-bound) and
behavior-preservation assertions for the collapsed phase-heading regexes.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* test(#663): make ReDoS regression assert structured result, not elapsed time

Replace elapsed-time assertions (which tripped local/no-elapsed-assertion
ESLint rule and were unsound for synchronous ReDoS) with structured-result
assertions on adversarial inputs: assert that malformed phase headings/
unchecked-item lines without a terminating colon/space yield an empty Set,
which is both the correct behavior and an exercise of the fixed linear regex
on the catastrophic-backtracking input shape.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* chore(#663): add Security changeset fragment for #665

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* test(#663): fold prototype-pollution regression into config.test.cjs

The standalone bug-663-config-prototype-pollution.test.cjs was a 9th
config-module test file, tripping lint-test-file-count (the allowlist is
ratcheted and must not grow). Consolidated into config.test.cjs instead.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* chore(#660): bump next to 1.3.1-dev.0 (-dev stream per ADR 660) (#672)

After the 1.3.0 release, next moves onto the -dev prerelease stream so the
trunk self-identifies as unreleased (floor = next patch). First manual
exercise of the ADR-660 release model.

Refs #660

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* ci(#660): use scoped GSD_BOT_PR_TOKEN for backmerge & release merge-back PR creation (#673)

The open-gsd org blocks the Actions GITHUB_TOKEN from creating PRs, so
auto-backmerge and the release finalize merge-back PR steps can't open
their PRs (must be done manually). Point those two steps at a scoped
secret (pull-requests:write + contents:write), falling back to
GITHUB_TOKEN so behavior is unchanged until the secret is added.

Refs #660

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* fix: accept published installer migration checksums

* fix(#670): self-healing recovery for installer-migration checksum drift (#675)

Editing the body of an already-released installer migration drifts its computed
checksum (it hashes plan.toString()). The integrity guard then hard-aborted
every prior install on upgrade with "applied migration checksum changed" — a
100% reproducible blocker (v1.3.0, all platforms).

Already-applied migrations are filtered out of `pending` and never re-run, so
a drifted checksum is functionally inert. ADR-0008 anticipates checksum-mismatch
state as something the install-state layer must handle gracefully (plan -> apply
-> recover/report), not abort on.

This supersedes the published-checksum allowlist merged in #674 (per-release
maintenance debt — every historical checksum hand-pinned, still throws for any
unregistered value) with a general, self-healing recovery:

- Replace the throwing guard with non-fatal `collectAppliedChecksumDrift`,
  surfaced on `plan.checksumDrift`.
- Reconcile drifted stored checksums durably on the next state write
  (`reconcileDriftedChecksums`), idempotently (no perpetual writes).
- Relocate the "shipped migration bodies are immutable" rule to a CI baseline
  test that locks every shipped migration's checksum and fails on body drift —
  where #615 should have been caught, instead of blocking users.

Removes #674's legacyChecksums field, per-migration checksum pins,
published-checksums.json fixture, and compat test.

Fixes #670

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#676): consolidate hotfix into release.yml (delete standalone hotfix workflow) (#678)

* fix(#676): consolidate hotfix into release.yml; delete standalone hotfix workflow

npm allows only one trusted publisher per package and it is release.yml, so the
standalone hotfix.yml (token-auth) could never publish via OIDC (ENEEDAUTH on the
v1.3.1 finalize). Fold the patch/hotfix path into release.yml — the sole OIDC
trusted publisher — and delete hotfix.yml.

- validate-version accepts X.Y.Z (Z>0) → hotfix/X.Y.Z + base_tag; rejects rc for
  hotfixes; X.Y.0 still → release/X.Y.0.
- create branches hotfix/X.Y.Z from the base tag with optional auto-cherry-pick
  (default on) of fix:/chore: from next; release path unchanged.
- finalize is branch-agnostic already and publishes @latest via the existing
  OIDC trusted publisher (no NODE_AUTH_TOKEN).
- CONTRIBUTING branching table updated; hotfix.yml removed.

Fixes #676
Supersedes #677.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#676): add hotfix/patch path to release.yml (OIDC trusted publisher)

The companion to the hotfix.yml deletion: release.yml now handles patch
versions (X.Y.Z) via hotfix/X.Y.Z branches and publishes @latest through the
existing OIDC trusted publisher. CONTRIBUTING branching table updated.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#676): update tests/docs referencing deleted hotfix.yml (#680)

hotfix.yml was deleted (folded into release.yml). Remove the now-broken
release-coverage-scope and policy-release-no-npm-self-upgrade assertions that
readFileSync'd hotfix.yml (release.yml equivalents retained), drop the dead
install-smoke.yml path trigger, and update VERSIONING.md / docs/branching.md
prose to describe hotfixes via the Release workflow with a patch version.

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* fix: bump hono to 4.12.23 on next to clear moderate advisory

Same moderate hono advisory (GHSA-3hrh-pfw6-9m5x et al.) that blocked the 1.3.1
hotfix is present on next (was 4.12.19); bump to keep the npm-audit gate green.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#690): promote CHANGELOG 1.3.x + gate release-notes promotion (#694)

* fix(#690): promote CHANGELOG 1.3.x + gate release-notes promotion

/gsd:update showed an empty "What's New" preview after updating to 1.3.1
because CHANGELOG.md's 1.3.x content was never promoted out of [Unreleased]
into dated sections, so `scripts/changeset/cli.cjs extract` returned exit 2
("no releases in range").

- CHANGELOG.md: split [Unreleased] into dated [1.3.0] and [1.3.1] sections
  (1.3.1 = hono advisory bump + installer-migration checksum self-heal, #670;
  1.3.0 = the feature release), restoring an empty [Unreleased].
- scripts/changeset/cli.cjs: new `verify` subcommand that exits non-zero when
  CHANGELOG has no dated `## [x.y.z]` heading for a version; hoist shared
  stripV/resolveChangelogPath helpers used by extract + verify.
- .github/workflows/release.yml: gate the finalize job on `verify` (after the
  build, before tag/publish) so an unpromoted CHANGELOG can never ship again.
- gsd-core/workflows/update.md: move `rm -f $CHANGELOG_TMP` after the
  human-readable extract re-run so the preview no longer degrades to
  "(changelog unavailable)".
- tests: regression guard for the 1.3.x headings + extract range + verify
  command coverage (present/absent/undated/v-prefixed/--json/prerelease).

Closes #690

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* chore(#690): add changeset fragment for #694

Fixed-type fragment for the user-facing /gsd:update preview fix and the
release-notes promotion gate.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#698): make auto-backmerge main→next actually land (admin-merge via PAT) (#699)

The Auto Back-Merge workflow could open a back-merge PR but never landed it,
and silently reported success on failure. Fixes:

- Merge via admin bypass using GSD_BOT_PR_TOKEN (the PAT) instead of auto-merge,
  since back-merge PRs structurally can't satisfy next's required checks
  (Issue-link / PR-template / changeset-lint).
- Stop swallowing create/merge failures with "|| echo ::warning" — real
  failures now fail the job. (That greenwashing hid the whole bug.)
- Resolve the PR number with `--jq '.[0].number // empty'` (a no-match returns
  the string "null", not empty) and capture a freshly-created PR's number from
  the create URL to avoid GitHub API eventual-consistency races.
- Merge the exact PR number (env-bound) rather than by branch name.
- Force-push the disposable SHA-named bot branch, guarded by a
  chore/backmerge-main-to-next-* name check so a mislabeled PR can't redirect
  the force-push.
- Apply labels non-fatally so a missing label can't abort PR creation.
- On a genuine merge conflict, fail loudly (::error + exit 1) instead of
  pushing an empty branch and opening a PR with no diff.

Closes #698

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#637): route 3 more workflows through gsd_run launcher (hardcoded $HOME sweep) (#642)

* fix(#637): route 3 more workflows through gsd_run launcher (hardcoded $HOME sweep)

The hardcoded `node "$HOME/.claude/gsd-core/bin/gsd-tools.cjs"` invocation form
fixed in plan-phase.md (#621) survived in three more workflows. Same bug class:
on a global/shim-only install with no project-local runtime, the hardcoded path
can miss a working install, so the step reports the tool "not found" instead of
resolving it via the launcher. #3668 introduced gsd_run resolution; these sites
were missed.

- plan-review-convergence.md: convert the 3 hardcoded invocations (init,
  roadmap get-phase, state planned-phase) to gsd_run. File already carried the
  canonical preamble (first gsd_run is the earlier convergence-enabled check).
- ingest-docs.md, spec-phase.md: convert their hardcoded invocations to gsd_run
  and inject the canonical launcher preamble via
  `node scripts/sync-runtime-launcher.cjs` (these files previously had no
  gsd_run and no preamble). The injected preamble is byte-equal to
  _runtime-launcher.snippet.sh and precedes the first gsd_run call, per
  runtime-launcher-parity invariant (B).
- Add tests/bug-637-workflow-no-hardcoded-home-tool.test.cjs: repo-wide
  regression guard asserting NO workflow .md invokes gsd-tools via a hardcoded
  $HOME path. Generalizes the plan-phase-only guard from #621 — the parity test
  guards retired $GSD_SDK / bare /gsd-tools tokens but not this form, which is
  how it survived across four files. Fails on the pre-fix files, passes after.

runtime-launcher-parity 7/7; full unit suite green (3477 pass / 0 fail).

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* chore(#637): add changeset fragment for PR #642

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* test(#637): update stale bug-2801 assertion to expect gsd_run

bug-2801 pinned ingest-docs.md to the hardcoded node "$HOME/.../gsd-tools.cjs" init form, which #637 replaces with the gsd_run launcher. Flip the assertion to expect gsd_run init ingest-docs; the bare-gsd-tools rejection and CLI-handler tests are unchanged, and bug-637's repo-wide guard now owns the no-hardcoded-$HOME invariant.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Co-authored-by: Tom Boucher <trekkie@nomorestars.com>

* fix(#705): route hardcoded $HOME gsd-tools invocations in agents/commands through gsd_run (#707)

* fix(#705): route hardcoded $HOME gsd-tools invocations in agents/commands through gsd_run

The hardcoded `node "$HOME/.claude/gsd-core/bin/gsd-tools.cjs" <cmd>` form
(fixed for workflows in #621/#637) survived in agent/command surfaces and
misresolves on global/shim-only installs. Route every agent-executed
invocation through the resolved `gsd_run` launcher in gsd-phase-researcher,
gsd-planner (load_graph_context extracted to a shared reference to stay under
the planner size budget), import, and graphify. Add a regression guard over
agents/ + commands/ + gsd-core/references/ bash blocks. User-facing display
messages and docs are intentionally left untouched.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#705): use repo changeset fragment format (type: Fixed, pr: 707)

The hand-written fragment used the standard changesets package format
(package: bump) which lacks the type:/pr: frontmatter the repo's
docs-required lint consumes (fail_malformed_fragment / missing_type).
Regenerated via scripts/changeset/new.cjs.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#685): set windowsHide on all Windows child-process spawns (#688)

* fix(#685): set windowsHide on all Windows child-process spawns

A visible "gsd-core" console window flashed on Windows whenever a gsd-core
child process spawned without `windowsHide: true`. The most visible offenders
fire on every SessionStart / `/clear` (execNpm's `shell:true` npm view via the
update-check worker) and on every Edit/Write/MultiEdit in a worktree (the
worktree-path guard's git probe).

Add `windowsHide: true` to every external-binary spawn in the runtime source:
- hooks/gsd-context-monitor.js (record-session spawn)
- hooks/gsd-worktree-path-guard.js (SPAWNOPT)
- hooks/gsd-workflow-guard.js (git branch --show-current)
- src/shell-command-projection.cts (execGit / execNpm / execTool)
- src/check-command-router.cts (git log execFileSync)
- src/roadmap-upgrade.cts (git status/rev-parse/reset/clean execSync)

gsd-check-update.js already had it (the precedent). probeTty's tty call is
POSIX-only and intentionally untouched. Adds a regression test that asserts
each site plus a repo-wide completeness guard so a future external-binary
spawn that omits windowsHide fails CI. No behavior change off-Windows.

Closes #685

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* chore(#685): set changeset pr number to 688

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#687): bound agy print mode with its native --print-timeout (#689)

`/gsd-review --agy` hung indefinitely on large prompts. agy's print mode runs the
full tool-enabled agent, and on a big, file-path-rich prompt its agentic Cascade
loops on the code_search/grep tool and never converges; the transcript fallback
only runs after agy exits, so it can't recover a run that never exits.

The agy CLI exposes no per-tool deny (that lives in the Antigravity SDK), but it
does expose --print-timeout — agy's native print-mode cap. Pass it explicitly so a
stalled run self-terminates through the tool's own mechanism; a non-zero exit
discards any partial output so the existing transcript fallback / "review failed"
stub take over. Adds a regression test.

Closes #687

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#669): /gsd-review --cursor actually invokes cursor-agent (#686)

* fix(#669): /gsd-review --cursor actually invokes cursor-agent

The Cursor reviewer branch in review.md never ran the agent:
- detection probed `cursor` (the IDE launcher) instead of the headless
  `cursor-agent` binary
- the invocation used the two-token `cursor agent` (the IDE treats `agent`
  as a file-path argument, so the agent never starts)
- the prompt was piped via stdin, but `cursor-agent -p` reads the prompt
  from a command-line argument, and `2>/dev/null` hid the empty result

Probe `cursor-agent`; invoke `cursor-agent -p --mode ask --trust
--output-format text` with the prompt passed as a file-path-reference
argument (avoids the OS arg-length limit on large prompts); capture stderr
so failures are diagnosable. Invert tests/cursor-reviewer.test.cjs to assert
the corrected contract, with negative guards against the two-token form and
the stdin pipe. The sibling `agy` reviewer already used the argument form.

Closes #669

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* chore(#669): set changeset pr number to 686

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* chore: archive 463 shipped changeset fragments before wiring render (#714)

CHANGELOG promotion was a manual operator step that was never run, so 463
fragments for work already shipped in <=1.3.1 accumulated in .changeset/.
Their notes were already hand-curated into the dated [1.2.0]/[1.3.0]/[1.3.1]
CHANGELOG sections (#690 backfill, PR #694). Rendering them now would
duplicate and mis-attribute shipped work.

Move them to .changeset/archived/ (read non-recursively by all changeset
tooling, so never rendered), keeping only the 3 genuinely-unreleased
fragments at the top level. Prep for wiring `render` into the release
finalize job (#690 follow-up).

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* chore(release): wire CHANGELOG render into release finalize job (#690 follow-up) (#715)

* feat(#690): wire CHANGELOG render into release finalize job

CHANGELOG promotion has always been a manual operator step, which is why
1.3.0/1.3.1 shipped unpromoted (#690). PR #694 added a `verify` latch that
fails a release lacking a dated heading, but nothing performed the promotion.

Wire `changeset render` into the finalize job, after build/test and before
the verify gate, committing the promoted CHANGELOG so it ships with the
release. Add a `--allow-empty` flag to cmdRender so a zero-fragment release
still emits a dated heading (with a '_No notable changes._' placeholder)
instead of writing nothing and tripping the verify gate.

Note: requires the changeset-archive cleanup (separate PR) to land first, so
the first render consumes only genuinely-unreleased fragments.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* chore(#713): set changeset pr number to 715

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* docs: document --only and --text flags for /gsd-autonomous (#695) (#716)

Adds --only N and --text to the COMMANDS.md reference table and the
run-phases-autonomously how-to guide, revised to fit the Diataxis
framework (reference: factual/parallel rows; how-to: goal-framed sections).

* feat(#656): Research module — content-addressed cache + provider seam + registry-API legitimacy (#664)

* feat(#656): add Research Store module (content-addressed cache, TTL staleness)

Content-addressed research cache behind a clock seam: researchKey (sha256, deterministic), putResearch/getResearch ({hit,stale}, never throws), ttlForSource (curated HIGH 30d / MED 7d / web LOW 1d), two-tier resolveStorePath (curated -> ~/.gsd/research-cache, web/synthesis -> project .planning/research/.cache). 28 behavioral + property tests; boundary coverage at ttl-1/ttl/ttl+1.

Issue #656. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* feat(#656): add Research Provider module (waterfall + confidence + plan)

Single source of truth for the Balanced provider waterfall (docs Context7->Ref->Jina, web Exa+Tavily, fallback Perplexity/Brave, Firecrawl scrape-only). classifyConfidence stamps HIGH|MEDIUM|LOW by provider (never throws). providerAvailability maps config flags to usable providers. planResearch checks the Research Store (injected seam) and returns cache-hits + a per-question fetch plan, falling through the waterfall to the always-available websearch terminal. 22 behavioral + property tests.

Issue #656. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* feat(#656): add Package Legitimacy module (registry-API verdicts, slopcheck optional)

Replaces the pip-install-or-degrade slopcheck prose gate with code: classifyPackage (pure, never throws) computes OK|SUS|SLOP from tunable thresholds (minAgeDays 30, minWeeklyDownloads 1000, requireRepo). checkPackages queries injectable npm/PyPI/crates registry adapters (real https with 5s timeout, degraded-not-thrown on failure); slopcheck is one optional adapter that can only escalate severity, never degrade to [ASSUMED]. 34 behavioral + property tests; boundary coverage on age and downloads (limit-1/limit/limit+1).

Known follow-up: real npm adapter must add api.npmjs.org last-week downloads fetch (currently null -> unknown-downloads). Issue #656. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* feat(#656): detect Tavily/Ref/Perplexity/Jina provider keys; complete npm downloads adapter

config: add tavily_search/ref_search/perplexity/jina availability flags (env var or ~/.gsd/<x>_api_key), mirroring brave_search/exa_search/firecrawl, so the Research Provider waterfall can gate them. package-legitimacy: real npm adapter now fetches api.npmjs.org last-week downloads (bounded, degraded-not-thrown) so weeklyDownloads is populated. +12 config tests; 34 legitimacy tests unchanged.

Issue #656. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* feat(#656): expose Research seam via gsd-tools query (research-plan, research-store, package-legitimacy)

Routes the L2-hybrid surface so agents reach it as CLI: 'query research-store get/put' (cache, HOME-sandboxable), 'query research-plan --input' (cache-hits + fetch plan from planResearch), 'query package-legitimacy check --ecosystem' (async registry verdicts). Commands skip .planning root resolution and appear in top-level usage. 5 behavioral runGsdTools tests; command-contract unchanged (335).

Issue #656. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* docs(#656): document Research module (CONTEXT predicates, ADR-0656, architecture, changeset)

Adds GSD-RESEARCH.* + DEFECT.RESEARCH-PROVIDER-PROSE-DRIFT predicates to CONTEXT.md, ADR-0656 recording the L2-hybrid seam decision, a docs/ARCHITECTURE.md Research Module subsection, and an Added changeset fragment (pr:0, backfill on PR). Notes the #657 deferrals (agent collapse + install.js MCP mapping).

Issue #656. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* chore(#656): sync inventory for research modules

Regenerate INVENTORY-MANIFEST.json and bump docs/INVENTORY.md CLI Modules count 82->85 with rows for research-store/research-provider/package-legitimacy (DEFECT.INVENTORY-DRIFT).

Issue #656. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* chore(#656): eslint-ignore generated research .cjs artifacts (ADR-457)

research-store/research-provider/package-legitimacy .cjs are tsc-generated from src/*.cts, so they belong in the ESLint ignore block (lint the .cts source, not the emitted .cjs). Fixes tests/551-eslint-bin-lib-coverage.

Issue #656. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* chore(#656): backfill changeset pr number to #664

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* chore(#656): satisfy eslint lint-tests gate

Fix 20 eslint errors in the new research files: use helpers.cleanup() instead of raw fs.rmSync() in tests (local/no-raw-rmsync-in-tests, Windows-EBUSY retry budget); drop redundant '| string' union members and unnecessary type assertions; deterministic object normalization in researchKey (no-base-to-string). Logic unchanged; 6180 tests still green.

Issue #656. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(#656): harden package legitimacy per review (W1/W2/I3/I4)

W1: httpsGet now reads statusCode; npm/PyPI/crates map 404 -> exists:false -> SLOP (registry-existence is the #1 slopsquatting defense; previously only npm caught it). Transport made injectable (_setHttpGet) for hermetic 404 tests. W2: suspicious-postinstall is now terminal SLOP independent of the optional slopcheck adapter, and the regex drops the bare https?:// arm (over-fired on esbuild/sharp/node-gyp) for shell-exec/download-exec signatures only. I3: checkPackages now threads version to registry.lookup and adapters verify that specific version exists. I4: moreServerVerdict -> moreSevereVerdict. +11 regression tests (all RED-first); 45 total green.

Addresses review by @davesienkowski on #664. Issue #656. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(#656): research-store tier coherence + freshness + version TTL (W4/I1/I2/I4)

I1: tier now derives from source (curated -> user ~/.gsd, else -> project .planning), not kind, so put-tier and get-tier can't diverge; kind is a key component only. W4: getResearch searches both tiers and returns the freshest (non-stale preferred), never letting a stale curated entry shadow a fresh web one; blank version caps TTL at 1 day (no 30d on version-blind keys). I2: atomic platformWriteSync instead of raw fs.writeFileSync on the shared global path. I4: dropped the dead ttlForSource arm. CLI get now searches both tiers. +5 RED-first regression tests; 38 green.

Addresses review by @davesienkowski on #664. Issue #656. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(#656): expose classifyConfidence as a CLI route, killing dead code (W3)

Adds 'gsd-tools query classify-confidence --provider X [--verified]' so research agents get the confidence tier FROM CODE (provider waterfall + verification lever) instead of asserting it in prose. classifyConfidence previously had no runtime caller. HIGH means 'trusted provider'; --verified raises web results to MEDIUM (verification semantics documented in ADR-0656). +4 behavioral tests.

Addresses review by @davesienkowski on #664 (W3). Issue #656. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(#656): close Codex adversarial-review findings (path-traversal, version-age, malformed-cache)

HIGH: research key must be 64-hex sha256 (isValidResearchKey) + resolved-path containment check in put/get + CLI validation -> blocks '../../x' arbitrary-file-write. HIGH: package legitimacy now derives publishedAt from the REQUESTED version (npm time[version], PyPI releases[version] upload_time, crates versions[].created_at) so a new malicious version of an old package can't inherit old age and evade 'too-new'. MEDIUM: getResearch validates entry shape (finite fetched_at + positive ttl + required fields) -> malformed cache entry is a miss, not fresh-forever. +regression tests (RED-first); 111 green.

Codex adversarial review (required pre-PR gate). Issue #656. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(#656): close code-review correctness findings

(1) package-legitimacy CLI now rejects unknown --flags instead of silently consuming the following package as a flag value; only --ecosystem takes a value. (2) crates recent_downloads (90-day) normalized to a weekly figure before the minWeeklyDownloads threshold (was ~13x too lenient). (3) research-plan --input validates parsed JSON is an object with an Array questions before destructuring -> clean usage error instead of an uncaught TypeError on null/bad input. (4) research-store put rejects a flag value that is itself a --flag (no more storing '--source' as content). (5) planResearch skips questions whose text is not a non-empty string instead of emitting question:undefined. +13 RED-first regression tests; 143 green.

Code-review gate. Issue #656. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* refactor(#657): extract researcher documentation_lookup to shared @-reference

6 researcher agents carried a near-duplicate <documentation_lookup> block; consolidate into gsd-core/references/research-documentation-lookup.md (@-included). Unifies the ctx7 CLI fallback to the safer 'command -v ctx7' guard (drops silent 'npx --yes ctx7@latest' execution in 5 agents). Behavior-preserving dedup; inventory 63->64 references. Phase A of the agent collapse.

Issue #657. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* refactor(#657): extract researcher philosophy + verification-protocol to shared @-references

philosophy and the pitfalls+pre-submission-checklist common-core were near-duplicated in project/phase researchers; consolidate into gsd-core/references/research-{philosophy,verification-protocol}.md (@-included). phase-researcher keeps its 3 extra checklist items inline. Pre-submission domains checklist made agent-agnostic so project-researcher doesn't lose features/architecture coverage. Write-contract intentionally left inline (bug-214 tests assert it verbatim). Inventory 64->66 refs. Behavior-preserving. Phase A.

Issue #657. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* feat(#657): wire gsd-phase-researcher to the Research seam (Phase B / S1)

The phase researcher now CALLS the code seam instead of carrying inline mechanics: provider waterfall -> 'gsd-tools query research-plan' (+ research-store put to cache digests); confidence-tier prose -> 'gsd-tools query classify-confidence'; slopcheck pip-install protocol -> 'gsd-tools query package-legitimacy check'. This makes the Research module a real runtime consumer (validates the seam end-to-end, addresses reviewer S1) and removes the duplicated waterfall/confidence/slopcheck prose. RESEARCH.md output contract, commit step, structured returns, and Phase-A @-includes unchanged. package-legitimacy-gate.test.cjs rewritten prose-grep -> behavioral (asserts the seam invocation).

Issue #657. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* feat(#657): wire gsd-project-researcher to the seam + add tavily/ref/jina MCP tools (Phase C.1)

project-researcher now calls gsd-tools query research-plan / classify-confidence (+ research-store put) instead of the inline provider waterfall + confidence-tier prose (mirrors the phase-researcher rewire; no package-legitimacy — phase-only). Output contract (STACK/FEATURES/ARCHITECTURE/PITFALLS/SUMMARY.md + sections, no-commit, structured returns, Phase-A @-includes) unchanged. Adds mcp__tavily/ref/jina__* to the project/phase/ui researcher tools frontmatter (Balanced provider set) so install.js MCP mapping (C.2) has a consumer.

Issue #657. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* test(#657): cover tavily/ref/jina MCP install handling + frontmatter parity guard (Phase C.2)

Investigation: exa/firecrawl have no explicit per-runtime tool-mapping — every mcp__<server>__* except context7 rides the generic passthrough (Copilot lowercases; OpenCode/Cursor/Windsurf/Augment keep as-is; Gemini auto-discovers). tavily/ref/jina are handled identically, no install path broken. Added 12 copilot-install passthrough tests + a mcp-tool-inheritance parity guard (tavily co-declared with exa, jina with firecrawl, ref present across the 3 web researchers) so the MCP set can't drift. No io.github registry ids invented (none sourceable in-repo); documented as a follow-up. 488 tests green.

Issue #657. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* feat(#657): profiles as source of truth for researcher agents + drift-guard (Phase C.3)

scripts/research-profiles.cjs declares each of the 7 researcher agents' identity + contract (name, description, color, tools, required @-includes, required gsd-tools seam calls, output-contract markers). scripts/gen-research-agents.cjs --check validates every committed agent against its profile; --write regenerates ONLY the frontmatter from profiles (body untouched) and is a verified no-op against the current agents (zero diff = fidelity). tests/research-agent-profiles.test.cjs is the DEFECT.GENERATIVE-FIX drift guard. Design note: profiles govern the generatable/contract surface rather than destructively regenerating the disparate operational prose bodies (those were deduped via @-includes in Phase A). scripts/ is not inventoried (no inventory change).

Issue #657. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(#657): complete agent provider-dispatch + parity guard; align legitimacy field; validate profiles

Adversarial-review findings: (HIGH) the seam-wired agents' Step-C dispatch only mapped 6 providers, so a planResearch result of jina/ref/perplexity/brave (reachable via the waterfall fallbacks) had no handling -> agent stall; completed both agents' dispatch to all 9 PROVIDER_WATERFALL ids + a catch-all, and added a parity test asserting agent dispatch stays in sync with research-provider PROVIDER_WATERFALL (DEFECT.GENERATIVE-FIX). (MEDIUM) phase-researcher package-legitimacy JSON example used 'package' but the module returns 'name' -> aligned. (LOW) gen-research-agents checkAgent now returns a clear failure for a malformed profile instead of throwing. +parity/validation tests (RED-first).

Issue #657. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(#656): make classifyConfidence verification-evidence-driven (W3)

Confidence conflated provider authority with claim verification — context7/ref
stamped HIGH purely by provider identity, and the only verification lever was a
self-set --verified flag. Split into two axes: provider authority (static) +
verification evidence (code-computed). HIGH now requires ground-truth
corroboration (legitimacyVerdict OK), independent of provider; authority alone
caps at MEDIUM; SLOP caps at LOW; the self-reported --verified is demoted to a
MEDIUM-only web lever. HIGH = corroborated-against-authoritative-source, not a
correctness guarantee. Adds --legitimacy-verdict to the classify-confidence CLI;
updates CONTEXT.md predicate + ADR-0656 (tier set unchanged, ADR-consistent).

Addresses davesienkowski's W3 review on #664.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#656): bind classify-confidence verdict to code, closing CLI self-grading

Adversarial review found the new --legitimacy-verdict flag was caller-supplied,
so an agent could self-assert OK->HIGH without any real legitimacy check —
reintroducing the exact self-grading hole W3 closes. Remove the free flag; the
CLI now computes the verdict via checkPackages only when --package/--ecosystem
is given (code-computed, not agent-asserted). Update the stale CLI test
(context7 alone -> MEDIUM) and extend the property test to vary legitimacyVerdict.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* feat(#717): re-base workflow size budget on bytes + document quality rationale (#719)

* feat(#717): re-base workflow size budget on bytes + document quality rationale

Re-base tests/workflow-size-budget.test.cjs from line counts to byte
counts (matches Codex's 32,768-byte project_doc_max_bytes cap; deterministic,
no tokenizer). Tier ceilings: XL=90000, LARGE=54000, DEFAULT=38000, GRACE=3000;
discuss-phase target re-expressed as <30 KB. The #597 tighten-only ratchet and
per-file budget semantics are preserved unchanged — only the unit swaps.

byteCount() uses fs.statSync().size to match `wc -c` (includes trailing
newline), deliberately not lineCount()'s newline-stripping.

Document the context-rot / attention-budget QUALITY rationale (independent of
prompt caching) in the test JSDoc and docs/ARCHITECTURE.md, plus the
Goodhart caveat: the byte budget measures one file, so the real goal is
bounded *loaded* context — eager @-imports game the proxy; legitimate
extraction is lazy. Update CONTEXT.md RULESET.WORKFLOW_SIZE_BUDGET to bytes and
remove a stale duplicate ruleset entry that still said "1800 lines".

Defers the #3182 MVP-mode split (tracked separately): MVP is a cross-cutting
concern woven through plan-phase/execute-phase, not a discrete extractable mode.

Closes #717

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* docs(#717): add changeset fragment for byte-budget re-base

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* feat(#159): auto-use existing RESEARCH.md in /gsd:plan-phase --research-phase (#718)

* feat(#159): auto-use existing RESEARCH.md in /gsd:plan-phase --research-phase

When RESEARCH.md already exists in research-only mode and neither --research
nor --view is passed, emit a one-line notice and exit cleanly instead of
prompting update/view/skip. This matches the promptless auto-use of standard
/gsd:plan-phase <N> (§5.1) and removes the §5.0/§5.1 inconsistency, making
AI-agent and CLI invocations non-interactive in the common case. The two
explicit-flag escape hatches (--research to refresh, --view to print) cover
any deviation.

Closes #159

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* chore(#159): point changeset fragment at PR #718

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* docs(#159): tighten research-phase reference register (Diataxis)

Make the 'no modifier' research-phase entries descriptive rather than
imperative and drop the trailing 'pass --research/--view' clauses, which
duplicated the adjacent --research/--view documentation. Reference docs
describe; the recovery flags are documented in their own entries. The
emitted runtime notice in the workflow keeps naming the flags (in-band
recovery), unchanged.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* chore: clean up clear-cut ESLint warnings (#732) (#734)

Pay down pre-existing error→warn lint debt. Removes dead imports/vars, unused functions, redundant regex/string escapes, and stale eslint-disable directives; converts unused `catch (_e)` to optional catch binding (src/*.cts).

No behavior change. Lint 345→125 warnings (0 errors); deferred categories (n/no-process-exit, test-sleeps, control-regex) tracked in #732 for follow-up. Full test suite green (0 failures); code-review verified all removals unused and all escape fixes semantics-preserving.

Closes #732

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* chore(lint): justify intentional no-control-regex (ANSI strip) + ratchet to error (#737)

The 5 no-control-regex warnings are all the same intentional ANSI-color-strip
pattern /\x1b\[[0-9;]*m/g across 5 test files. The \x1b (ESC) control char is
the required leading byte of an ANSI SGR sequence, so matching it is the whole
point of stripping color codes from captured CLI/console output. Add an inline
eslint-disable-next-line with justification at each site (not a refactor — the
control char is essential, not accidental), then flip no-control-regex from
warn to error so the debt can't regrow.

Refs #736

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* chore(lint): refactor magic-sleep tests to async waits + ratchet rules to error (#735)

Replace raw setTimeout/Atomics.wait synchronization sleeps in 4 test files
with a shared async delay()/waitFor() poll-for-condition helper in
tests/helpers.cjs, then flip local/no-magic-sleep-in-tests and
no-restricted-syntax from warn to error so the debt can't regrow.

- tests/helpers.cjs: add delay(ms) + waitFor(predicate, opts), exported
- bug-1974: setTimeout backoff -> await delay()
- config.test: drop Atomics.wait sleep(); async retry via await delay()
- graphify: waitForBuildStatus/cleanupHookRepo async via await delay()
- locking-bugs: 3 Atomics.wait poll loops -> await waitFor()
- eslint.config.mjs: ratchet both rules warn -> error

Refs #733

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#704): exclude } and ) from Codex path-rewrite lookbehind (no literal $gsd-core in installs) (#710)

* fix(#704): exclude } and ) from Codex path-rewrite lookbehind

Shell variable expressions like \${VAR}/gsd-core/ and command-substitution
paths like \$(cmd)/gsd-local-patches were being rewritten to \$gsd-core and
\$gsd-local-patches respectively because the negative lookbehind in
convertSlashCommandsToCodexSkillMentions did not include } or ).

Add both characters to the lookbehind set:
  (?<![a-zA-Z0-9./})])

Also adds regression test:
  tests/bug-704-codex-launcher-path-corruption.test.cjs

Closes #704

* chore: add changeset for #704

* test: use RUNTIME_ROOT_PATH in assertion to eliminate dead-code lint warning

Replace the partial hard-coded fragment '}/gsd-core/bin/' with the
existing RUNTIME_ROOT_PATH const so the assertion both compiles clean
(no unused variable) and self-documents which canonical launcher path
must survive Codex conversion intact (#704).

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* chore: link changeset to PR #710

---------

Co-authored-by: Claude Sonnet 4.6 <noreply@anthropic.com>

* fix(#706): skip rescue of already-committed SUMMARY to avoid worktree cleanup merge_failed (#709)

* fix(#706): skip rescueSummaryArtifacts when SUMMARY is already committed

rescueSummaryArtifacts now probes `git cat-file -e HEAD:<path>` before
copying a SUMMARY.md into the main checkout.  When the file is already
committed on the worktree branch, copying it as an untracked file causes
`git merge --no-ff` to abort with "untracked working tree files would be
overwritten by merge" — a permanent merge_failed cleanup-wave failure.

Fail-closed on timeout: if cat-file is unreliable we skip rescue (the
merge will surface the collision as it did before, which is recoverable).

Adds 4 new test cases in worktree-safety.test.cjs covering:
- committed SUMMARY skipped, merge succeeds (#706 regression case)
- committed SUMMARY skipped even when timeout (fail-closed)
- uncommitted SUMMARY still rescued (existing contract preserved)
- rescue failure on ENOSPC still propagates (unchanged)

Closes #706

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* chore: add changeset for #706

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* fix(#706): treat cat-file exit 128 as uncertain — skip rescue (fail-closed)

The previous guard skipped rescue only when `exitCode === 0` (committed) or
`timedOut`. Any other non-zero exit, including `128` (fatal git error: corrupt
object store, unborn HEAD, missing repo), fell through and PROCEEDED with
rescue — potentially re-creating the #706 untracked-file merge collision.

Fix: rescue ONLY when `exitCode === 1` (cat-file definitively reports the
object absent). All other outcomes — 0 (committed), 128 (fatal), null/SIGTERM
(timeout), or any other code — are treated as "uncertain → skip rescue".

Also corrects the JSDoc bullet that still referenced `git ls-files
--error-unmatch` (the old mechanism); updated to `git cat-file -e HEAD:<relPath>`.

Regression test added: asserts rescue is SKIPPED when cat-file returns exit 128,
leaving the merge to surface the issue safely rather than silently copying an
already-committed file.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* chore: link changeset to PR #709

---------

Co-authored-by: Claude Sonnet 4.6 <noreply@anthropic.com>

* refactor(scripts): replace process.exit() with ExitError + runMain handler (#739) (#740)

Part 1 of 2 of the n/no-process-exit cleanup (umbrella #738): convert every
process.exit() call in standalone scripts/** CLIs to the rule-compliant pattern.

- New shared helper scripts/lib/cli-exit.cjs: ExitError(code,message) + runMain()
  which translates a thrown ExitError / returned number into process.exitCode
  (never process.exit()), flushing output and still firing process.on('exit').
- main()-based entrypoints: throw new ExitError(code) for errors, return <code>
  for verdicts; invoked via runMain(main). Child exit codes preserved via return.
- top-level-only scripts: imperative body extracted into main() so mid-flow
  aborts (throw ExitError) actually halt; pure consts/helpers stay at module scope.
- diff-touches-shipped-paths.cjs: stdin event handling restructured to an async
  read so the whole flow runs under runMain; uncaughtException/unhandledRejection
  nets replaced by an in-band catch that preserves EXIT_ERROR=2.

Exit codes verified unchanged for every converted script (success/error/help and
the 0/1/2 semantic codes in diff-touches). Rule stays warn here; flipped to error
in part 2 (#738) once gsd-core/bin/** is also clean.

Refs #739

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* refactor(bin): replace process.exit() in CLI entrypoints + ratchet rule to error (#738) (#741)

Part 2 of 2 of the n/no-process-exit cleanup (completes umbrella #738; part 1
was #739/scripts). Converts the 20 flagged process.exit() calls in the three
hand-written gsd-core/bin CLI entrypoints and flips n/no-process-exit to error.

- New src/cli-exit.cts -> gsd-core/bin/lib/cli-exit.cjs (ExitError + runMain),
  the gsd-core-side equivalent of scripts/lib/cli-exit.cjs; registered in
  .gitignore, eslint ignores, and the inventory manifest like its siblings.
- gsd-tools.cjs: 13 apply-prompt-budget exits -> throw ExitError; main()->runMain.
- verify-reapply-patches.cjs: 6 exits -> throw ExitError / return verdict; runMain.
- check-latest-version.cjs: 1 exit -> return verdict; runMain.
- eslint.config.mjs: n/no-process-exit warn -> error.

Scope note: the gsd-core/bin/lib/*.cjs modules (core, state, profile-pipeline,
roadmap-command-router, adr-parser, ui-safety-gate) are tsc-generated and
eslint-ignored (ADR-457), so their process.exit calls were never flagged and are
intentionally left untouched. Only the linted hand-written entrypoints are in scope.

Exit codes verified unchanged for all three entrypoints.

Closes #738

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* refactor(#720): lazy-load MVP-only reference bodies on non-MVP runs (#746)

* refactor(#720): lazy-load MVP-only reference bodies (eager @-import → gated Read)

Convert eager @-imports of MVP-only reference bodies into lazy "Read" instructions
gated on MVP_MODE / WALKING_SKELETON / MVP+TDD, so non-MVP planning/execution runs
no longer pull MVP guidance into context. Covers both the workflow files and the
planner/executor agent definitions (the dominant context-cost path):

- workflows/plan-phase.md: planner-mvp-mode.md + skeleton-template.md (L146/936/937/941)
- workflows/execute-phase.md: execute-mvp-tdd.md halt-report ref, now gated on gate-trip (L191)
- agents/gsd-planner.md: planner-mvp-mode.md, user-story-template.md, skeleton-template.md
- agents/gsd-executor.md: execute-mvp-tdd.md

The dedicated always-MVP mvp-phase workflow keeps its eager imports (intentional).
Behaviour is unchanged; non-MVP runs simply carry less loaded context. Adds a
regression guard mirroring the discuss-phase lazy-load test, and documents the
conformance in docs/ARCHITECTURE.md.

Refs #720

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* docs(#720): add changeset fragment (pr #746)

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* refactor(#712): replace Codex slash-command denylist lookbehind with positive-boundary match (#747)

* refactor(#712): replace Codex slash-command denylist lookbehind with positive-boundary match

The hyphen-style /gsd-<cmd> -> $gsd-<cmd> conversion in
convertSlashCommandsToCodexSkillMentions used a negative-lookbehind DENYLIST
enumerating characters that must NOT precede a real mention. #637 -> #704 showed
this is an unbounded treadmill: each new unanticipated preceding char (/, ., word
chars, then }, )) leaked the same path-corruption bug class, and a backtick-wrapped
path (`/gsd-core/workflows/update.md`) still leaked through.

Replace it with a POSITIVE two-boundary definition of a mention:
  1. Left: opens at start-of-string, whitespace, or an inline-prose delimiter
     (backtick/quote/paren/bracket).
  2. Right: the command token is not followed by a path separator `/` (a path
     continues, a command does not). The (?![a-z0-9/-]) lookahead also blocks
     regex backtracking to a shorter command.

This closes the whole class by construction (no preceding-char denylist to
maintain) and fixes the backtick-wrapped-path corruption the #704 test
documented as a pre-existing gap, while preserving conversion of legitimate
backtick-wrapped mentions (e.g. CONTEXT.md's `/gsd-execute-phase` lists).

The colon-style /gsd: replace is intentionally left unguarded (it never appears
as a filesystem path segment) and is annotated as such.

Tests assert the regex directly (function now exported) across a convert/
don't-convert matrix plus one end-to-end pipeline assertion for the headline
backtick-path case.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* chore(#712): add changeset fragment for PR #747

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#730): scope current-milestone Phase Details section in roadmap parser (#748)

`extractCurrentMilestone()` scoped the current-milestone window to its
`## Phases` checklist subsection and terminated at the milestone's own
`## Milestone … (Phase Details)` heading, so the `### Phase N:` detail
headers fell outside scope. Every parser-backed command — `init.phase-op`
(and thus `/gsd:discuss-phase`, `/gsd:plan-phase`), `state`, `roadmap list`,
and `validate health` (W006) — therefore could not resolve phases of any
milestone after the first until a `.planning/phases/` directory already
existed, blocking discuss/plan.

The parser now additionally includes the current milestone's `(Phase Details)`
section in scope, located via the already-computed version matches and anchored
(boundary-aware) to the selected milestone's version token so sibling
sub-milestones sharing a version prefix do not cross-pollinate. The existing
heading selection and primary window are unchanged.

Adds tests/bug-730-milestone-phase-details-scope.test.cjs covering the
two-milestone reproduction, first-milestone non-regression, direct
getRoadmapPhaseInternal resolution, validate-health W006 visibility, a
three-milestone roadmap, and the closed-sibling sub-milestone case.

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#683): auto-degrade phase execution to sequential on worktree base mismatch (#749)

* fix(#683): auto-degrade phase execution to sequential on worktree base mismatch

Claude Code forks worktree-isolated executors off the repository default
branch (origin/HEAD), not the orchestrator's HEAD. Running /gsd-execute-phase
on a branch diverged from the default (unmerged milestone/feature branch) left
every executor without the phase's plan files and tripped the
worktree-branch-check guard with `exit 42` — 100% reproducible, all OSes.

- New module src/worktree-base-ref.cts: HEAD-vs-fork-base drift detection
  (origin/HEAD with symbolic-ref fallback) and no-clobber worktree.baseRef
  management, exposed as `worktree base-check` / `worktree set-baseref`.
- execute-phase.md: pre-dispatch, for Claude Code with worktrees enabled,
  auto-degrades the run to sequential on the main tree when a base mismatch
  is detected, recommending worktree.baseRef:"head". The exit-42 guard stays
  as a backstop.
- Installer: fresh local Claude installs set worktree.baseRef:"head" in
  .claude/settings.local.json (no-clobber, respecting an explicit shared
  settings.json value); upgrades print an opt-in notice pointing at
  `gsd-tools worktree set-baseref`.
- Docs: how-to guide, CLI/config reference, planning-config cross-ref.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#683): auto-apply worktree.baseRef on upgrade; gate fresh+upgrade on use_worktrees

Per maintainer direction: on a local Claude Code UPGRADE, set
worktree.baseRef:"head" automatically (no opt-in notice) when the project's
workflow.use_worktrees is enabled, instead of merely printing a remediation
notice. For consistency the FRESH path is now gated the same way: both paths
compute worktrees-enabled once (bounded walk-up read of .planning/config.json,
default enabled unless workflow.use_worktrees === false) and apply the
no-clobber baseRef only when enabled — never overwriting an explicit value in
settings.local.json or a shared settings.json. gsd-tools worktree set-baseref
remains for manual use. Docs + changeset updated; tests hardened (file-exists
assertions, fresh+disabled case, upgrade idempotency).

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#683): measure workflow byte-budget on LF, fixing Windows-only CI failure

The workflow-size-budget test failed only on Windows: git checks out the .md
files as CRLF (no eol=lf in .gitattributes) and byteCount used
fs.statSync().size (raw on-disk bytes), counting an extra \r per line. That
inflated execute-phase.md — the XL high-water-mark file pinned near its ceiling
by the tighten-only ratchet — from 88492 LF bytes to ~90245 on Windows, over
the 90000 XL ceiling, while passing on the LF-checkout Mac/Linux runners.

The ceilings are explicitly "calibrated against raw `wc -c`" on an LF checkout,
so the measurement should be LF-based on every platform. byteCount now reads the
file and counts Buffer.byteLength after stripping CR, making the budget
platform-independent (a no-op on LF checkouts; verified statSync === normalized
for all 88 workflow files). No ceilings changed. Added a regression test
asserting CRLF and LF content of the same file count identically.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#683): make worktree-base-ref test path mocks Windows-safe (path.join)

tests/worktree-base-ref.test.cjs keyed its injected readFile/writeFile mocks
(and a few expected `file` values) with forward-slash template literals like
`${claudeDir}/settings.local.json`. The module composes those paths with
path.join(), which emits backslashes on Windows, so the mock keys never matched
the module's lookup → readFile returned null → resolveEffectiveBaseRef /
cmdWorktreeBaseCheck / cmdWorktreeSetBaseRef (and the JSONC variants) failed on
the Windows full-test runner only (they passed on Mac/Linux, and the install
tests passed because they use the real filesystem). The module is correct;
only the test fixtures hardcoded '/'.

All mock keys and path assertions now use path.join(base, ...) mirroring the
module, so they match on every platform (no-op on POSIX). 19 path references
across 16 lines.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* feat(#703): add --granularity override flag to /gsd:plan-phase (#750)

* feat(#703): add --granularity override flag to /gsd:plan-phase

Add a `--granularity <coarse|standard|fine>` flag to /gsd:plan-phase that
overrides the configured planning granularity for a single invocation.

The override is a new highest-priority tier above the existing precedence
chain (granularities[phaseType] -> granularity -> planning.granularity ->
'standard') in resolveGranularityInternal; when the flag is absent, resolution
is byte-for-byte unchanged. cmdInitPlanPhase now resolves with phaseType
'planning' so granularities.planning participates, and emits the resolved
value in the init JSON, which the plan-phase workflow forwards to the planner
prompt. Invalid values are rejected at the CLI boundary via a shared
assertValidGranularityOverride helper.

Closes #703

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* chore(#703): set changeset pr to 750

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#751): recognise config-set prototype-pollution guard in CodeQL + test dynamic-key vectors (#752)

CodeQL alert #26 (js/prototype-pollution-utility) kept firing on setConfigValue
because its dataflow does not trace the #663 Set-based, pre-loop keys.some(...)
forbidden-key check as a sanitising barrier on the write site.

- src/config.cts: replace the Set + pre-loop check with inline literal
  comparisons (key === '__proto__' || 'prototype' || 'constructor') on the exact
  key used to index `current`, immediately before each write (intermediate keys
  in the descent loop, plus the final key). Same forbidden set, same error
  message and ERROR_REASON.CONFIG_PARSE_FAILED — behaviour unchanged from #663,
  but the barrier is now CodeQL-recognised.
- tests/config.test.cjs: add regression tests for schema-valid dynamic-prefix
  keys (agent_skills.__proto__, agent_skills.constructor, agent_skills.prototype,
  features.__proto__, review.models.constructor) that pass the isValidConfigKey
  schema gate and reach the guard. Each asserts the guard's own message fires
  (not the schema gate's "Unknown config key") and Object.prototype is not
  polluted. The prior #663 tests never reached the guard — their keys are
  rejected by the schema gate first — so the guard's real attack surface was
  untested.

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* feat(#25): scope gsd-verifier Step 7b to enumerate-or-single-test; forbid full-suite re-runs (#753)

* feat(#25): scope gsd-verifier Step 7b to enumerate-or-single-test; forbid full-suite re-runs

Step 7b's lone test example (`npm test -- --grep "$PHASE_TEST_PATTERN"`) is
mocha/vitest/jest-specific, where `--grep` filters which tests *execute*. Models
generalized it to `cargo test --workspace 2>&1 | grep X` (runs the whole suite,
filters only *output*) and repeated it once per must-have, adding minutes per
verification with no new evidence after the first run.

Replace the example with language-agnostic guidance: prove a test EXISTS via
enumeration (`cargo test -- --list` / `pytest --collect-only` / `npx vitest
list` / `go test -list`), and prove it PASSES via a single named test
(`cargo test <name> -- --exact` / `pytest -k` / `npx vitest run -t`). Add a
Spot-check constraint forbidding more than one full-suite run per verification
or piping a full run through grep per must-have, while still permitting one
saved run + grep when a full run is genuinely required. docs/AGENTS.md gains a
one-line Key-behaviors note, and a new test asserts the Step 7b content.

Scoped per the maintainer decision on the issue: folded into Step 7b (no new
top-level Step 7a) with no VERIFICATION.md label changes.

Closes #25

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* chore(#25): add Changed changeset fragment for PR #753

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* feat(#52): add agent_skills_security.trusted_global_roots allowlist for global skills (#754)

* feat(#52): add agent_skills_security.trusted_global_roots allowlist

Opt-in allowlist so a global: agent skill whose SKILL.md realpath resolves
outside the default global skills base (e.g. ~/.claude/skills) is accepted
when its real target lies under a user-declared trusted root. Default [] is
byte-identical to prior behavior; the symlink-escape guard is preserved and
simply re-applied against each declared root.

- src/security.cts: loadTrustedGlobalRoots — tilde-expand (~ and ~/), reject
  project-relative and dangerously broad roots (filesystem/UNC root, homedir),
  realpath-canonicalize each root every run and drop non-existent ones.
- src/init.cts: on base-check failure the guard consults the trusted roots
  (hoisted out of the loop); emits a stderr NOTE when a skill is accepted via
  a trusted root so the widened boundary is visible.
- src/core.cts: thread agent_skills_security through loadConfig.
- config-schema.manifest.json: allow the new key path.
- docs/CONFIGURATION.md: document the option and its security model.
- tests/agent-skills.test.cjs: unit + end-to-end CLI coverage (regression,
  feature, negative, broad-root hardening, stderr NOTE).

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* docs(#52): add changeset fragment for trusted_global_roots (#754)

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* refactor(#651): consolidate verification-status routing into one queryable seam (#755)

* refactor(#651): consolidate verification-status routing into one queryable seam

The passed/gaps_found/human_needed verification status was re-encoded as
bare strings across three prose surfaces (gsd-verifier emits, execute-phase
routes, ship gates), each independently deciding the per-status next action
with no parity coupling — the DEFECT.GENERATIVE-FIX class.

Give the enum one home: src/verification.cts (-> bin/lib/verification.cjs)
exposing `gsd_run query verification.status <phaseDir>` returning a typed
{status, next_action, next_command}. ship.md and execute-phase.md now consume
the query instead of re-deriving the routing in prose; gsd-verifier.md points
at the shared vocabulary as the single emitter (values unchanged).

Also fixes the latent broad-grep status misread (DEFECT.FRONTMATTER-SCALAR-
BROAD-GREP): execute-phase.md read `grep "^status:"` over the whole report, so
a body `status:` line could misroute a valid phase. Extraction is now
frontmatter-scoped in one place. A parity test fails if a verifier status
gains no route. Lands the two CONTEXT.md DEFECT entries captured on the issue.

Closes #651

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* chore(#651): set changeset pr to 755

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#758): trigger draft-PR auto-close on pull_request_target (#760)

Bare `pull_request` hands fork PRs a read-only GITHUB_TOKEN, so the
close/comment API calls 403 and a first-time/external contributor's draft
PR survives — bypassing the auto-close for exactly the population the job
targets. Switch to `pull_request_target`, which runs in the base-repo
context with a write-capable token even for fork PRs. Safe because the job
never checks out or executes PR-supplied code; it only reads event metadata
and calls the GitHub API. The minimal `permissions: pull-requests: write`
block still constrains the token.

Add a regression guard in tests/workflow-maintainer-skip.test.cjs asserting
the workflow triggers on pull_request_target and not bare pull_request.

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* docs(#58): add ADR for Runtime Install Policy Module boundary (#762)

Record the Runtime Install Policy Module decision and ownership
boundary: install policy projects a pure, typed install plan by
composing artifact placements (ADR-3660) and command text (ADR-0009)
plus per-runtime config intentions, with no filesystem IO; runtime
adapters consume the plan and execute concrete file mutations and
format-specific config rendering. Explicitly records what stays
outside the policy module (TOML/JSON/Markdown serialization, merge
semantics, filesystem effects).

Adds the ADR index row in docs/adr/README.md and a glossary entry in
CONTEXT.md. Leads the installer-refactor chain (#58 -> #60 -> #56).

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* feat(#759): non-destructive CHANGELOG preview in the rc release job (#763)

The rc action publishes a release candidate to @next for testing but
never surfaces the curated CHANGELOG section for the version under test —
render only runs destructively at finalize (#715), so there was no safe
way to preview the upcoming notes during the RC window.

Add a --preview mode to scripts/changeset/cli.cjs cmdRender: it renders
the dated release section to stdout via the existing renderChangelog/
serializeChangelog path (with priorChangelog: null, so only the new
section is emitted), reuses the shared injectEmptyPlaceholder helper for
zero-fragment releases, and returns WITHOUT writing CHANGELOG.md or
deleting any .changeset fragment. Wire a "Preview CHANGELOG" step into
the rc job that renders to a file (standalone command, so a malformed
fragment fails the step) and cats it to the job summary and log.

Closes #759

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* feat(#761): add scheduled base-context sweep to close SHA-branch-evading draft PRs (#765)

close-draft-prs.yml (on pull_request_target after #760) cannot close fork draft
PRs whose head branch name looks like a Git SHA — GitHub never dispatches
pull_request_target for such branches, and a pull_request run from a fork gets a
read-only token. So a draft PR on a SHA-named fork branch evades the auto-close.

Add close-draft-prs-sweep.yml: a schedule (every 6h) + workflow_dispatch sweep
running in base-repo context with pull-requests: write that paginates open PRs,
filters to non-OWNER/MEMBER/COLLABORATOR drafts, and closes + comments them with
the identical policy/message as the event-driven workflow. Re-fetches each
candidate before mutating (TOCTOU guard), closes before commenting so
enforcement is never gated on the explanatory comment, and core.setFailed on
partial failures. The per-PR workflow remains the fast path; this is the
safety net for the documented residual bypass.

Extends tests/workflow-maintainer-skip.test.cjs with structural guards locking
the triggers, write permission, maintainer carve-out, pagination, and message.

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* fix discord release changelog announcements

* test(#339): regression guard for gsd-sdk refs in runtime surfaces (#691)

* test(#339): add regression guard for gsd-sdk refs in runtime surfaces

Lock in the already-clean runtime surface so a retired `gsd-sdk`/`GSD_SDK`
reference cannot creep back into a shipped prompt or hook. Scans
gsd-core/workflows, gsd-core/references, commands/gsd, agents, and hooks
(excluding the gitignored dist/ build artifact).

Complements gsd-tools-path-refs.test.cjs, which only catches the
`gsd-sdk query` binary form; this catches any runtime reference. A second
test guards against an empty sweep so a future dir rename can't silently
turn the guard into a no-op.

Intentionally does NOT touch bin/install.js (live stale-package-detection
mechanics per #339 triage) or CI/lint scripts (legitimate stale detection).

Refs #339

* test(#339): split file content on /\r?\n/ for Windows CRLF parity

The windows-test-parity-guard lint requires test files that readFileSync +
split to use /\r?\n/, not '\n', so CRLF files don't leave a trailing \r.
New test files are not in the PR #3649 allowlist.

* test(#339): cover .sh/.json runtime files in workflows surface

Address #691 review: the gsd-core/workflows surface scanned only .md,
silently skipping two deployed runtime files — _runtime-launcher.snippet.sh
(synced into every hook) and discuss-phase/templates/checkpoint.json. Add
.sh/.json so the guard covers all 290 deployed runtime files (was 288/290),
not just the .md subset.

* test(#339): cover templates/contexts surfaces + per-ext empty-sweep guard

Address PR #691 review (trek-e):
- Add gsd-core/templates and gsd-core/contexts to RUNTIME_SURFACES —
  both are deep-copied by the installer and runtime-loaded via
  @~/.claude/gsd-core/templates/*.md anchors, so a reintroduced gsd-sdk
  ref there would have slipped past the guard. (major)
- Reword the bin/install.js exclusion rationale: it has zero gsd-sdk refs
  today (subsystem removed in #515, shim retired in #522); the real reason
  it is excluded is that it is installer code, not a deployed prompt/hook
  surface. (minor)
- Make the empty-sweep guard assert coverage per configured extension, not
  per surface — .md files alone kept gsd-core/workflows green even if
  .sh/.json were dropped, silently un-covering _runtime-launcher.snippet.sh
  and discuss-phase/templates/*.json. (low)

---------

Co-authored-by: Tom Boucher <trekkie@nomorestars.com>

* refactor(#60): make runtime config adapter registry explicit (#795)

* refactor(#60): make runtime config adapter registry explicit

Replace scattered inline `runtime === '...'` config-mutation branching in
bin/install.js with an explicit, typed adapter registry. The new
src/runtime-config-adapter-registry.cts maps each of the 15 supported
runtimes to a config intent { installSurface, writesSharedSettings,
finishPermissionWriter }; install()/finishInstall() dispatch by resolved
intent instead of runtime-name checks (cursor/windsurf/trae collapse to one
profile-marker-only branch).

Behavior-preserving: the same config files are written for the same runtimes
(opencode still writes both settings.json and its permissions; kilo writes
only its permissions; codex minimal-mode and opencode GSD_TEST_MODE guards
unchanged). Unknown runtimes fail loudly via TypeError, with an Object.hasOwn
barrier so prototype-chain keys (__proto__/constructor) also throw rather than
returning a bogus intent. Leads the installer-refactor chain (#58 -> #60 ->
#56), building on ADR-58.

Closes #60

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* chore(#60): add changeset for runtime config adapter registry

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* docs(#60): register Runtime Config Adapter Registry in CONTEXT.md glossary

Per docs/contributor-standards.md, every new Module/seam must get a
`### <Name>` entry under the domain glossary. Adds the entry for the
runtime-config-adapter-registry seam introduced in this PR (interface,
policy boundary, source file, ADR-58 / #60 cross-references).

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* feat(#764): skip cross-platform test matrix for docs-only and inert-CI PRs (#798)

test.yml had no paths filter and the ci-test-scope classifier treated docs/
and every .github/workflows/* as code_changed, so documentation edits and
product-irrelevant automation tweaks still spun up the full Linux/Windows/macOS
matrix. Narrow the heavy matrix to changes that can actually affect the product
or the test pipeline.

- ci-test-scope.cjs: drop docs/ from code_changed (docs-only -> full skip; the
  required-tests fan-in still reports green). Add src/ to code_changed (it was
  missing -> a source-only PR previously skipped all tests). Add INERT_WORKFLOWS
  allowlist + isInertCi() + an "inert CI" rule, and a product_changed output that
  gates the heavy test/coverage jobs. Fail-safe: any workflow not on the inert
  allowlist defaults to the full matrix. A module-load assertion throws if a
  PROTECTED_WORKFLOWS entry (test/install-smoke/mutation/security-scan/release)
  is ever added to the inert set, so a weakening edit fails CI loudly.
- test.yml: keep the static 3-lane matrix (so the H1 shell-policy linter can
  still statically verify the Windows lane), gate test/coverage on
  product_changed, add a lightweight ubuntu-only test-inert job, and branch the
  required-tests fan-in on product_changed.
- docs-required.yml: run docs-parity-live-registry (gated on docs/ changes) so
  pure-docs PRs still catch live-registry drift without the matrix.
- tests: cover docs-only, inert-only, src/, pipeline, unknown-workflow fail-safe,
  mixed escalation, the code_changed=false -> no-lanes invariant, and protected-
  workflow tamper-evidence.

Closes #764

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* feat(#766): distribute gsd-core as a native Claude Code plugin (#797)

* feat(#766): distribute gsd-core as a native Claude Code plugin

Add an additive .claude-plugin/plugin.json manifest plus hooks/hooks.json so gsd-core can be installed as a first-class Claude Code plugin (marketplace or zero-friction @skills-dir), with /gsd-core: namespaced commands and lifecycle management — alongside the unchanged npm/file-copy installer.

- .claude-plugin/plugin.json: validated with 'claude plugin validate --strict'
- hooks/hooks.json: mirrors the installer's always-on Claude hook wiring via ${CLAUDE_PLUGIN_ROOT}
- package.json: ship .claude-plugin in the npm tarball
- tests/issue-766-plugin-manifest.test.cjs: manifest + always-on-hook-contract drift guards
- docs: install-on-your-runtime.md + FEATURES.md

Closes #766

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* docs(#766): add ADR-766 + glossary entry for Claude Code Plugin Manifest Module

Record the plugin manifest as the Seam projecting gsd-core's artifact surfaces onto the Claude Code plugin contract (sibling of the Runtime Artifact Layout Module, ADR-3660), with the defined kind->field mapping and the always-on hook projection rule.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* refactor(#56): retire legacy runtime directory helpers into runtime-homes projection (#802)

* refactor(#56): retire legacy runtime directory helpers into runtime-homes projection

Consolidate per-runtime global config-dir resolution onto the single
canonical projection runtime-homes:getGlobalConfigDir. Extend it with the
explicitDir override (CLI --config-dir) and the opencode/kilo
OPENCODE_CONFIG/KILO_CONFIG file-path precedence the installer helpers had,
making it byte-for-behavior equivalent to the old getGlobalDir across all
15 install runtimes.

Delete bin/install.js's getGlobalDir/getOpencodeGlobalDir/getKiloGlobalDir
(and the orphaned local expandTilde), repoint all 9 call-sites, and remove
getGlobalDir from module.exports (net -242 lines in the installer). Migrate
the 5 test importers to the canonical projection; harden default/XDG
assertions against ambient *_CONFIG env vars. getAgentsDir now respects
OPENCODE_CONFIG/KILO_CONFIG consistently with the installer (intentional
convergence). Update CONTEXT.md Installer Module entry.

Completes the installer-refactor chain #58 -> #60 -> #56.

Closes #56

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* chore(#56): add changeset for runtime directory helper retirement

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* feat(#786): elevate GitHub Copilot installer — lifecycle hook + AGENTS.md (#804)

* feat(#786): elevate Copilot installer with lifecycle hook + AGENTS.md

Emit a self-contained sessionStart hook config (.github/hooks/gsd-session.json
local, ~/.copilot/hooks/gsd-session.json global) and write AGENTS.md at the repo
root (Copilot CLI reads it as primary instructions) alongside
copilot-instructions.md. The hook is an inline `command` hook (no separate hook
script), so it cannot dangle. Uninstall removes both and preserves user content.

Verified against GitHub Copilot CLI primary docs: hooks-configuration (camelCase
events, version+hooks shape, inline bash/powershell command hooks) and
add-custom-instructions (AGENTS.md read at repo root as primary instructions).

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* chore(#786): set changeset pr number to 804

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#783): resolve Kilo global skills base to ~/.kilo/skills (#806)

* fix(#783): resolve Kilo global skills base to ~/.kilo/skills

getGlobalSkillsBase('kilo') returned ~/.config/kilo/skills (the XDG config
dir), but Kilo Code discovers global skills from ~/.kilo/skills/ (the .kilo
dir in HOME), independent of the kilo.jsonc config dir. Add a HOME-relative
special case so the resolver matches Kilo's actual discovery path.

The config dir (~/.config/kilo) and the installer's command/ path are
correct and unchanged. This corrects the path used by doctor/status and
agent-skills-block resolution; the installer writes commands (not skills)
for Kilo, so no files were being written to the wrong location.

Closes #783

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* chore(#783): set changeset pr to 806

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* feat(#785): write .cursor/commands/ Cursor 1.6 slash-command surface (#805)

* feat(#785): write .cursor/commands/ as Cursor 1.6 slash-command surface

Cursor 1.6 (released 2025-09-12) introduced plain-markdown slash commands
in `.cursor/commands/<name>.md` — no frontmatter, invocable via `/` in the
Agent input. GSD previously emitted only `~/.cursor/skills/` for Cursor.

This PR wires a second artifact kind for `cursor` in
`runtime-artifact-layout.cts`: `convertedCommandsKind('commands', 'gsd-',
'convertClaudeCommandToCursorCommand', configDir)`. The new kind applies the
same `convertClaudeToCursorMarkdown` transforms (tool renames, brand
substitution, slash-command normalisation) and then strips YAML frontmatter
so the output is plain prose. Skills output is unchanged.

`stageCommandsForRuntimeFlat` in `install-profiles.cts` stages each source
`.md` as a flat `<stem>.md` in a temp dir; the existing `_copyStaged` commands
path then prefixes and copies to `<configDir>/commands/`.

`.cursor/mcp.json` is explicitly OUT OF SCOPE: GSD ships no MCP server; the
`mcpServers` schema cannot be usefully populated by the installer.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* refactor(#785): address review nit

---------

Co-authored-by: Claude Sonnet 4.6 <noreply@anthropic.com>

* feat(#787): elevate Cline — .clinerules/ dir form, PreToolUse hook, AGENTS.md (#803)

* feat(#787): elevate Cline — .clinerules/ dir form, PreToolUse hook, AGENTS.md

Migrate the installer's Cline output from a single-file .clinerules to the
.clinerules/ directory form (.clinerules/gsd.md), which is the prerequisite for
Cline's v3.36 hooks (a path cannot be both a file and a directory). Add a
.clinerules/hooks/PreToolUse lifecycle hook implementing Cline's JSON stdin ->
{cancel,errorMessage,contextModification} protocol; it guards .planning/
artifacts and fails open. On global installs, merge GSD instructions into the
cross-tool ~/.agents/AGENTS.md target (marker-delimited, merge-safe). A legacy
single-file .clinerules is migrated in place; --uninstall removes the new
artifacts and strips the AGENTS.md GSD block.

Also fixes the uninstall targetDir for Cline local installs (it pointed at
./.cline instead of the project root) and re-runs writeManifest after the
Cline artifacts are written so they are hash-tracked.

Self-contained: implemented independently of the #782 Cline skills work.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#787): address review findings

- Scope PreToolUse hook path-walk to PATH_KEY fields only (eliminates false
  positive when doc body content mentions .planning/)
- Use lstatSync + isSymbolicLink() for migration guard so GSD never writes
  through a user's symlinked .clinerules into an external directory
- Add regression tests for both cases

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* chore(#787): set changeset pr: 803

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#812): honor COPILOT_HOME in Copilot global config-dir resolution (#814)

* fix(#812): honor COPILOT_HOME in Copilot global config-dir resolution

getGlobalConfigDir('copilot') resolved the global config directory using
only --config-dir > COPILOT_CONFIG_DIR > ~/.copilot, ignoring the
COPILOT_HOME env var. Per GitHub's Copilot CLI docs, COPILOT_HOME
overrides the default ~/.copilot location (and user-level hooks are read
from $COPILOT_HOME/hooks/), so a global --copilot install wrote all
artifacts (skills, agents, copilot-instructions.md, the gsd-session.json
hook) to ~/.copilot even when the user relocated their Copilot home,
making them undiscoverable by Copilot CLI.

Mirror the codex/CODEX_HOME branch: precedence is now
--config-dir > COPILOT_CONFIG_DIR > COPILOT_HOME > ~/.copilot. Uninstall
uses the same resolver, so it stays symmetric.

Also: document COPILOT_HOME in the installer --help notes, the
USER-GUIDE env-var table, and the installer-migrations Copilot row; and
clear COPILOT_HOME in the two default-path test suites so they stay
hermetic now that the resolver honors it.

Closes #812

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* chore(#812): add changeset for PR #814

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* feat(#788): expand Qwen Code hook-event coverage (#807)

* feat(#788): expand Qwen Code hook-event coverage to 4 new events

Register SubagentStop, Stop, PreCompact (gsd-context-monitor.js) and
UserPromptSubmit (gsd-prompt-guard.js) in the Qwen Code installer.
Guard is isQwen-only — Claude Code and all other runtimes are unchanged.
Uninstall loop extended to include the 4 new event names.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* fix(#788): reconcile to 3 Qwen-only events — defer UserPromptSubmit

gsd-prompt-guard exits unless tool_name is Write|Edit (PreToolUse
payload shape); UserPromptSubmit carries raw user-prompt text with no
tool_name field, so wiring it would be a silent no-op.  Deferred to a
follow-on issue.

Artifacts made consistent:
- bin/install.js: drop UserPromptSubmit registration block; uninstall
  loop drops UPS from event list
- .changeset/788-qwen-hook-events.md: corrected to 3 events + rationale
- docs/how-to/install-on-your-runtime.md: remove UPS row from hook table
- tests/enh-788-qwen-hook-events.test.cjs: assert UPS NOT registered;
  fix idempotency suite to persist settings between installs; drop
  UPS-specific assertions

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* chore(#788): update changeset PR number to #807

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* test(#788): prune stale install-bucket allowlist entry for enh-788 test

---------

Co-authored-by: Claude Sonnet 4.6 <noreply@anthropic.com>

* enhancement(#782): emit gsd skills to ~/.cline/skills for Cline >= v3.48 (#809)

Cline added a global skills system (~/.cline/skills/<name>/SKILL.md) in
v3.48.0, but gsd treated Cline as rules-only and emitted zero skills
(getGlobalSkillsBase('cline')=null, empty artifact kinds). This makes gsd
emit skills for Cline at global scope, alongside the existing .clinerules.

- runtime-homes: getGlobalSkillsBase('cline') -> ~/.cline/skills (was null)
- runtime-artifact-layout: cline emits a skills kind for GLOBAL scope only
  (local stays .clinerules-only), mirroring claude's scope dispatch
- install.js: convertClaudeCommandToClineSkill emits name+description-only
  SKILL.md frontmatter (Cline/agentskills.io spec; no Claude-specific
  allowed-tools/argument-hint/agent), hyphen-normalized + .cline/-rewritten
  body; global cline routed through the skills path while .clinerules is
  still written; _applyRuntimeRewrites cline case handles custom
  CLINE_CONFIG_DIR; convertClaudeToCliineMarkdown also rewrites bare
  ~/.claude and CLAUDE_CONFIG_DIR
- docs: install-on-your-runtime.md documents Cline global skills vs local rules
- tests: converter (name+description-only), global emission, skills+.clinerules
  coexistence, scope-aware layout, custom-dir paths, idempotency

Closes #782

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* feat(#790): emit Augment slash commands (~/.augment/commands/) (#808)

Co-authored-by: Claude Sonnet 4.6 <noreply@anthropic.com>

* enh(#784): emit native skills for OpenCode + Kilo runtimes (#810)

* feat(#784): emit native skills for OpenCode + Kilo runtimes

OpenCode and Kilo share a config schema and both discover on-demand
skills from skills/<name>/SKILL.md. The installer previously emitted
only flat commands (command/) and file-based agents (agents/) for these
runtimes. Add a shared OpenCode-family skill writer that stages each GSD
command as a spec-compliant SKILL.md (name matching the directory,
description 1-1024 chars), wired through the runtime artifact layout so
uninstall cleans skills/ automatically. Skills respect the active
install profile.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#784): correct skill body paths + preserve user dev-preferences

Address adversarial-review findings:
- Add opencode/kilo cases to _applyRuntimeRewrites so staged SKILL.md
  bodies are re-pointed from the converter's hardcoded default config dir
  to the actual install target (fixes --local / --config-dir installs;
  commands/agents already did this by applying pathPrefix pre-conversion).
- Preserve user-owned skills/gsd-dev-preferences across reinstall in
  installOpencodeFamilySkills (snapshot+restore around the gsd-* prune),
  matching installRuntimeArtifacts.
- Export installOpencodeFamilySkills and add regression tests.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#784): guarantee command/skill body parity, fix kilo-alt double-rewrite

Follow-up adversarial-review found the post-conversion path rewrite could
double-rewrite custom Kilo dirs (kilo -> kilo-alt -> kilo-alt-alt) because
the kilo pathPrefix is a $HOME (non-absolute) superset of the hardcoded
default base. Restructure so OpenCode/Kilo skills mirror copyFlattenedCommands
exactly: stage raw commands, apply pathPrefix BEFORE conversion via a new
shared applyOpencodeFamilyPathPrefix() helper (now used by both the command
and skill writers), then convert. This guarantees byte-for-byte command/
skill body parity for global, --local, and --config-dir installs and removes
the prefix-overlap hazard. Drop the fragile _applyRuntimeRewrites opencode/
kilo case. Strengthen the path regression test.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* refactor(#784): derive opencode/kilo skills from the same staged command set

Pass the installer's _stageSkills() output directly to
installOpencodeFamilySkills instead of re-staging via the layout, so the
command/ and skills/ surfaces always cover the identical profile-resolved
set — including the --minimal/--core-only alias path, which stages
differently from a plain --profile=core. Verified: minimal install now
emits 8 commands and 8 skills.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* chore(#784): set changeset PR number to 810

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* test(#784): fully escape backslashes in test helper (CodeQL js/incomplete-string-escaping)

Replace the dot-only escape `replace(/[.]/g, '\\.')` with a complete
regex-escape pattern `replace(/[\\.*+?^${}()|[\]]/g, '\\$&')` so all
regex metacharacters (including backslash itself) in `defaultBase` are
safely escaped before interpolation into `new RegExp(...)`.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#813): apply per-runtime skill path rewrites in applySurface (#817)

* fix(#813): apply per-runtime skill path rewrites in applySurface

applySurface() re-staged skill artifacts but, unlike installRuntimeArtifacts(),
never applied the per-runtime path rewrites. So /gsd:surface
(profile/enable/disable/reset) overwrote installed SKILL.md bodies with the
converter's default ~/.claude paths instead of the install target (pathPrefix),
silently regressing skill path references for every skillsKind runtime until
the next reinstall.

applySurface now mirrors installRuntimeArtifacts: for kind.kind === 'skills' it
derives pathPrefix the same way and applies applyRuntimeContentRewritesInPlace
on the staged dir before syncing.

- bin/install.js: export applyRuntimeContentRewritesInPlace
- runtime-artifact-layout.cts: carry resolved scope on Layout; export
  getInstallExports; type computePathPrefix/applyRuntimeContentRewritesInPlace
  on InstallExports
- surface.cts: lazily derive pathPrefix (only when a skills kind exists) and
  apply the rewrite via the shared getInstallExports accessor — single source of
  truth with install, only skills kinds rewritten (matches install)
- tests: regression test parameterized over cursor + codex asserting
  post-applySurface bodies carry the install pathPrefix, not ~/.claude
- CONTEXT.md: glossary updated for the applySurface rewrite parity + scope seam

Closes #813

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* chore(#813): add changeset fragment for PR #817

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* test(#813): normalize configDir prefix to forward slashes for Windows CI

The #813 regression assertion compared skill bodies against a raw
${configDir}/ prefix, but production derives pathPrefix via
path.resolve(configDir).replace(/\\/g, '/'). On Windows, mkdtempSync
returns backslash paths while the rewritten body uses forward slashes,
so the assertion would fail Windows-only (not covered by local gsd-test).
Normalize the expected prefix the same way production does.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#816): mirror install command-prefix handling in _syncGsdDir (#822)

* fix(#816): mirror install command-prefix handling in _syncGsdDir

applySurface() via _syncGsdDir handled command artifacts differently from a
fresh install. For flat command dirs (cursor/augment/opencode/kilo) install's
_copyStaged adds kind.prefix (gsd-<stem>.md) and _removeGsdEntries prunes
prefix-scoped, but _syncGsdDir copied staged files verbatim (unprefixed) and
pruned by exact name. So every /gsd:surface toggle wrote wrong filenames,
orphaned the installed gsd-*.md, and deleted user-authored command files.

_syncGsdDir's commands/agents branch now mirrors install:
- flat command dirs get the gsd- prefix on copy; namespaced dirs (commands/gsd)
  and agents keep staged names, using install's namespacedByDir rule
- prune is prefix-scoped so user files in shared flat dirs are preserved;
  namespaced commands/gsd stays membership-pruned so superseded commands are
  still removed on profile shrink

The naming rule is intentionally re-implemented (not via require('bin/install.js')
to avoid its module-load banner side-effect); a strict parity test asserts
applySurface and installRuntimeArtifacts produce identical command filenames for
opencode/kilo/cursor/augment/gemini, guarding against drift.

Closes #816

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* chore(#816): add changeset fragment for PR #822

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* chore(#771): convert agent color: hex/magenta values to documented named colors (#823)

* chore(#771): convert agent color: hex/magenta values to documented named colors

Claude Code's sub-agent `color:` field documents only 8 named colors
(red, blue, green, yellow, purple, orange, pink, cyan). Twelve agent
files used hex values and two used the undocumented `magenta`; convert
each to the nearest documented named color so the intended per-agent
TUI color differentiation is spec-compliant.

- agents/*.md: 14 color values hex/magenta -> nearest named color
- scripts/research-profiles.cjs: update the 3 generated research-agent
  profiles (source of truth) so gen-research-agents stays in sync
- docs/AGENTS.md: update documented colors; add missing Color rows for
  gsd-nyquist-auditor, gsd-project-researcher, gsd-phase-researcher
- tests/agent-frontmatter.test.cjs: add regression guard asserting every
  agent color: is in the documented named-color set

Closes #771

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* chore(#771): add changeset

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* feat(#773): add --ephemeral and --dangerously-bypass-hook-trust to automated codex exec wrappers (#824)

* feat(#773): add --ephemeral and --dangerously-bypass-hook-trust to automated codex exec invocations

Automated codex exec calls in the review workflow now carry --ephemeral
(no session-state accumulation across CI runs) and
--dangerously-bypass-hook-trust (skip hook-trust prompts for hooks
whose provenance gsd-core already controls). Both flags were verified
present in the installed codex CLI (codex exec --help).

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#773): correct changeset pr: reference to #824

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* feat(#775): ship a gemini-extension.json extension package (#818)

Add a Gemini CLI extension package so users can install, update, and
remove GSD through Gemini's own extension lifecycle and have it appear in
`gemini extensions list`:

  gemini extensions install https://github.com/open-gsd/gsd-core
  gemini extensions update gsd-core
  gemini extensions uninstall gsd-core
  gemini extensions link /path/to/gsd-core   # dev

This mirrors the additive Claude Code plugin manifest (#766): a thin,
version-stamped manifest enforced by an in-repo drift test. The extension
ships the context-file payload (GEMINI.md), loaded into every Gemini
session; slash-command/agent/hook TOML projection into the extension is a
documented follow-up. The manual `npx gsd-core --gemini` installer (which
provides the /gsd:* commands) is unchanged — purely additive, no breaking
change.

- gemini-extension.json: name=binName, version tracks package.json,
  description, contextFileName=GEMINI.md (minimal; no mcpServers — gsd
  ships no MCP server)
- GEMINI.md: Gemini-session context payload
- package.json: add both artifacts to files[] so they publish
- CONTEXT.md: add "Gemini Extension Package" glossary entry
- docs: USER-GUIDE + install-on-your-runtime how-to
- tests/issue-775-gemini-extension.test.cjs: manifest validity, version
  parity with package.json, contextFileName existence, files[] publication

Closes #775

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* feat(#768): pre-populate settings.json permissions.allow/deny for Claude Code (#819)

* feat(#768): pre-populate settings.json permissions.allow/deny for Claude Code

Adds mergeClaudePermissions() to bin/install.js which non-destructively
appends GSD's known-safe tool-call patterns to permissions.allow and
defense-in-depth credential-file patterns to permissions.deny during
Claude Code installs. Merge is idempotent (no duplicates on reinstall)
and additive (existing user entries preserved). Uninstall removes only
the exact GSD-owned entries.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* chore: update changeset pr number to 819

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* feat(#774): emit service_tier/model_verbosity in Codex agent TOML + agents/openai.yaml skill chip (#828)

* feat(#774): emit service_tier/model_verbosity in Codex agent TOML + agents/openai.yaml skill chip

- Add service_tier = "flex" and model_verbosity = "low" to the Codex
  ConfigProfile TOML for light-tier agents (gsd-research-synthesizer,
  gsd-codebase-mapper, gsd-plan-checker, and 8 others identified via
  AGENT_DEFAULT_TIERS). Field names/values verified against Codex schema
  (profile_toml.rs / config_types.rs Verbosity enum). Non-light agents
  are unaffected.

- Add generateCodexSkillMetadataYaml() and writeCodexSkillMetadataFiles():
  after installRuntimeArtifacts, iterate every gsd-* skill directory,
  read the short-description already emitted in the SKILL.md frontmatter
  by convertClaudeCommandToCodexSkill, and write agents/openai.yaml with
  interface.display_name and interface.short_description for the Codex
  TUI skill picker chip.
  - yamlQuote (JSON.stringify) handles all YAML-unsafe chars.
  - User-owned gsd-dev-preferences dir is never overwritten.
  - Errors per-skill are swallowed so a bad SKILL.md can't abort install.
  - agents/openai.yaml is covered by the snapshot/rollback system and
    manifest hash (writeManifest hashes skill dirs recursively).
  - Uninstall symmetry: _removeGsdEntries removes whole gsd-* dirs.

- 21 new tests in codex-config.test.cjs covering service_tier/verbosity
  TOML emission, YAML generation (round-trip via js-yaml), and
  writeCodexSkillMetadataFiles including an e2e integration test.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#774): correct docs-lint coverage — proper changeset format + USER-GUIDE entry

Rewrite the changeset fragment from old @opengsd/gsd-core:patch format to the
required type:/pr: schema so the docs-lint parser can consume it.  Add a new
"Codex skill picker and agent scheduling (#774)" section to docs/USER-GUIDE.md
describing the flex-tier scheduling and /skills TUI chip enrichments — both are
user-visible and belong in docs rather than behind a docs-exempt marker.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* feat(#769): adopt context:fork + effort on heavy workflow skills (#820)

* feat(#769): emit context:fork + effort: frontmatter on heavy workflow skills

Add `context: fork` and `effort: xhigh` to the three heaviest workflow
commands (plan-phase, execute-phase, autonomous) and `effort: low` to the
two quick-status commands (progress, stats).

On Claude Code, `context: fork` runs the skill in an isolated subagent
context window so the main session's context budget is protected.
`effort: xhigh` / `effort: low` signal the appropriate token-budget tier to
the runtime. Both fields are silently ignored by runtimes that do not
recognise them (Gemini, Codex, Cursor, etc.) — no behaviour change outside
Claude Code.

Update convertClaudeCommandToClaudeSkill in bin/install.js to preserve
`context:` and `effort:` when rewriting source command files to SKILL.md for
a Claude global install. Add install-suite tests to assert the fields are
present in both source commands and the installed SKILL.md output.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* test(#769): tighten regex assertions + add execute/plan-phase effort coverage

Fix low-severity adversarial finding: tighten test regex patterns from
`\s*` to `[ \t]*` so they cannot match across newlines (CRLF parity).
Add missing effort: xhigh assertions for gsd-execute-phase and gsd-plan-phase
SKILL.md install output to complete the black-box coverage gap.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* feat(#772): adopt stable Codex hook events + commandWindows for Windows parity (#827)

* feat(#772): adopt stable Codex hook events + commandWindows for Windows parity

Register three new stable Codex hook events (SubagentStart, Stop,
PostToolUse) wired to gsd-context-monitor.js so Codex installs get
the same context-headroom tracking at subagent and session boundaries
that Claude/Qwen already have.

Add commandWindows field to the SessionStart hook entry on Windows so
Codex uses the .cmd shim directly (Git Bash/MSYS cannot POSIX-exec
node.exe). commandWindows is only emitted on win32; POSIX is unchanged.

Refactor reconcileCodexHooksJsonSessionStart into a generic
reconcileCodexHooksJsonEvent so any event name can be reconciled with
the same dedup/preserve-user-entries logic.

Add gsd-context-monitor.js and .cmd to MANAGED_HOOK_COMMAND_BASENAMES
_BY_SURFACE so idempotent re-runs de-duplicate entries correctly.

30 new tests covering: export surface, event registration for each of
the three events, commandWindows parity (POSIX vs win32), idempotency,
uninstall, and user-entry preservation.

Closes #772

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#772): windows path normalization + docs-lint

- Normalize scriptPath backslashes to forward slashes in
  ensureCodexHooksJsonEvent and ensureCodexHooksJsonSessionStart so that
  isManagedHookCommand can match stored commands against configDir on
  Windows CI runners. path.resolve returns backslash paths on Windows,
  but when platform is not 'win32' (e.g. platform:'linux' in tests),
  projectManagedHookCommand skips normalization — producing a mismatch
  that breaks idempotency deduplication (the same hook entry appended
  twice on re-register). Forward-slash paths are always valid in both
  Node.js and Codex, so the normalization is safe for all platforms.
- Fix changeset pr: 0 → 827 to resolve fail_malformed_fragment.
- Add Codex hook coverage table to docs/how-to/install-on-your-runtime.md
  documenting the SubagentStart/Stop/PostToolUse events + commandWindows
  Windows-parity field added by this enhancement.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* feat(#778): cross-runtime command enrichment (Gemini {{args}}/!{}, Qwen priority) (#825)

* feat(#778): cross-runtime command enrichment (Gemini {{args}}/!{}, Qwen priority)

Enrich the installer's per-runtime command/skill generators with native,
verified, additive fields:

- Gemini CLI: map Claude's $ARGUMENTS -> Gemini's {{args}} in generated TOML
  commands so typed arguments interpolate; inject live .planning/STATE.md into
  /gsd:progress via a fixed, injection-safe !{cat .planning/STATE.md 2>/dev/null}
  shell block (no interpolated input).
- Qwen Code: emit the optional numeric `priority` field on main-loop skills so
  the most-used workflows sort first in the /skills list (higher = earlier per
  the Qwen skills spec; the issue's inverse numbering was corrected).

OpenCode per-command model/agent/subtask/variant enrichment was evaluated and
intentionally not implemented: `model` reintroduces the #1156
ProviderModelNotFoundError regression for non-Anthropic providers (the converter
deliberately strips model:), `subtask`/`agent` change execution semantics for
GSD's interactive commands, and `variant` is not in the OpenCode command schema.

Schemas verified against primary docs (Gemini custom-commands, Qwen skills,
OpenCode commands/skills). Adds tests/enh-778-* and how-to + USER-GUIDE docs.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* chore(#778): set changeset PR number to 825

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* feat(#789): elevate CodeBuddy — slash commands (#830)

* feat(#789): elevate CodeBuddy — emit slash commands (+ document subagent/MCP scope)

Emit a CodeBuddy slash-command surface so GSD workflows appear in the
'/' menu, reaching parity with other elevated runtimes.

- Add convertClaudeCommandToCodebuddyCommand and register a commands/
  artifact kind for the codebuddy runtime (commands/gsd-<name>.md),
  consistent with the Cursor (#785) and Augment (#790) commands surfaces.
- Mark emitted skills user-invocable:false so the commands surface is the
  sole '/' entry point (no duplicate /gsd-* entries); skills stay
  model-invocable. CodeBuddy's SKILL.md supports this field.
- Normalize $HOME/.codebuddy (bare + slash) path forms in runtime
  rewrites so --config-dir/local installs don't leak the default home.
- Report installed commands/ count on install; uninstall prunes gsd-*
  commands while preserving user-owned commands.

Scope: subagents (~/.codebuddy/agents/) are already emitted by the
generic agents block (unchanged); no mcp.json is written (gsd ships no
MCP server, and CodeBuddy's mcp.json registers only external servers).

Closes #789

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* chore(#789): set changeset pr number to 830

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* feat(#776): Gemini hook events (BeforeAgent/AfterAgent/BeforeModel) + hooksConfig.enabled check (#829)

* feat(#776): Gemini hook events (BeforeAgent/AfterAgent/BeforeModel) + hooksConfig.enabled check

Register three new Gemini-CLI hook events on install:
  - BeforeAgent: fires before agent planning; wired to gsd-context-monitor
  - AfterAgent: fires after final response generation; wired to gsd-context-monitor
  - BeforeModel: fires before each LLM call (per-turn); wired to gsd-context-monitor

All three reuse gsd-context-monitor.js (no new hook files). Uninstall cleanup
loop extended to remove the new events. Non-array guard added for robustness
against malformed settings.

Also detect hooksConfig.enabled:false in Gemini settings and emit a clear
warning — without this check, all registered hooks silently do nothing.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* chore: update changeset pr: 829

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* docs(#776): document Gemini hook events

Add hook coverage table to the Gemini CLI section of install-on-your-runtime.md,
covering the three new events (BeforeAgent/AfterAgent/BeforeModel wired to
gsd-context-monitor) plus a callout for the hooksConfig.enabled:false silent
failure mode detected by the installer.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* feat(#777): register Cursor-native hooks (.cursor/hooks.json) for session-start/post-tool parity (#831)

* feat(#777): register Cursor-native hooks (.cursor/hooks.json) for session-start/post-tool parity

- Add gsd-cursor-session-start.js: injects STATE.md presence reminder (or
  new-project nudge) into Cursor sessions via the sessionStart hook event
- Add gsd-cursor-post-tool.js: emits an additional_context nudge when
  write-class tool calls touch .planning/ files (postToolUse hook event)
- Add 'cursor-hooks-json' installSurface to runtime-config-adapter-registry;
  writeCursorHooksJson/reconcileCursorHooksJson write the canonical
  { version: 1, hooks: { sessionStart, postToolUse } } JSON shape with
  idempotent reconciliation that preserves user-owned hook entries
- Hook scripts are copied with /gsd:→gsd- rewrite so installed files
  contain no colon-form slash-command refs (bug-376 invariant)
- 20 new tests in tests/cursor-hooks.test.cjs cover all reconciler paths,
  entry helpers, removal, runtime adapter surface, and hook script behavior
- Update CONTEXT.md, ARCHITECTURE.md, installer-migrations.md, and
  000-first-time-baseline.cts to include Cursor hooks.json surface

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#777): build hooks/dist on demand in bug-376 test for scoped/windows CI

hooks/dist is gitignored and only produced by `npm run build:hooks`.
The CI scoped (ubuntu-latest/node-22) and windows (windows-latest/node-24)
test jobs do NOT run build:hooks before executing tests, so bug-376's
prerequisite suite was failing with "hooks/dist not found" on both legs.

Add ensureHooksDist() helper (mirrors bug-3357 pattern) that builds
hooks/dist on demand in the before() hooks of prerequisite and Suite 3.
Also add ensureHooksDist() call to Suite 3's before() so the snapshot
step is also hermetic.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* docs(#832): add how-to guide for minimal install / skill profiles (#835)

Add docs/how-to/install-minimal-and-add-skills.md covering the --minimal
/ --core-only / --profile=core install, the core/standard/full profiles,
and growing the surface live via /gsd:surface or on reinstall. Register
it in the docs/README.md How-to guides index.

Closes #832

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* feat(#815): add /gsd-update --next to install the @next RC channel (#839)

Adds an opt-in --next (alias --rc) flag to /gsd-update targeting the @next RC dist-tag (ADR #660), with a {latest,next} allowlist enforced at three layers, channel-aware version check + banner, and byte-for-byte unchanged default @latest behavior.

Closes #815

* fix(#837): three-dot diff in ci-test-scope so docs-only PRs skip the heavy matrix (#841)

CI test-scope detection diffed changed files with a two-dot
`git diff --name-only base head`, where base is the moving tip of `next`.
A PR branch cut from a slightly older `next` surfaced every product file
`next` had gained since the merge-base, flipping product_changed/full_matrix
and running the full Windows/macOS matrix + coverage on docs-only PRs.

Switch to a three-dot `git diff --name-only base...head` (vs the merge-base),
matching GitHub's PR "Files changed" semantics. Add a regression test that
builds a stale-base topology, plus a guard test pinning `fetch-depth: 0` on
the `changes` job (required for the merge-base to be locally available).

Closes #837

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* feat(#836): no-LLM duplicate-issue detection + challenge + 1-day auto-close (#843)

* feat(#836): no-LLM duplicate-issue detection + challenge + 1-day auto-close

Adds a deterministic (no-LLM) duplicate-issue governance lifecycle:

- scripts/issue-dedupe.cjs: pure, unit-tested module (tokenize, Sørensen–Dice
  title similarity, scoreCandidates, renderChallengeComment, shouldClose) with
  fail-safe destructive-action guards.
- duplicate-check.yml (issues:opened): scores new-issue title against open
  issues, posts a challenge comment + applies the pending `possible-duplicate`
  label on a clear match.
- duplicate-sweep.yml (daily cron): closes possible-duplicate issues whose
  challenge comment is >24h old with no human reply and no 👎 veto; honors
  exempt labels; re-checks the label immediately before close (TOCTOU guard);
  strips the label on close to avoid reopen loops.
- remove-duplicate-label.yml (issue_comment:created): clears the label and
  applies needs-maintainer-review when any human responds.
- bug_report.yml / docs_issue.yml: add the required "I searched existing
  issues" preflight checkbox so all five forms force a pre-search attestation.
- docs/agents/triage-labels.md: document the label + lifecycle.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* chore(#836): add changeset fragment for duplicate-issue detection

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* feat(#770): register Claude Code lifecycle hooks (SubagentStop/Stop/PreCompact/FileChanged) (#821)

* feat(#770): register Claude Code lifecycle hooks (SubagentStop/Stop/PreCompact/FileChanged)

Wire three new context-tracking events (SubagentStop, Stop, PreCompact) to
gsd-context-monitor so context-headroom warnings surface at model-stop and
subagent-finalisation moments — not just on PostToolUse.  Add a new
FileChanged hook (gsd-config-reload.js) that hot-reloads .planning/config.json
context mid-session when the user edits it, injecting a config summary as
hookSpecificOutput.additionalContext.  Updates plugin manifest hooks.json,
managed-hooks-registry, installer-migration-report allowlist, and
shell-command-projection cleanup tables.  Tests: 21 new assertions in
enh-770-claude-hook-events.test.cjs; enh-788 and issue-766 test suites updated.

Closes #770

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* docs(#770): document newly-registered Claude Code lifecycle hooks

Add a Hook coverage table to the Claude Code npm installer section of
docs/how-to/install-on-your-runtime.md describing SubagentStop, Stop,
PreCompact, and the new FileChanged (gsd-config-reload.js) hook that
hot-reloads .planning/config.json mid-session. Also fixes the changeset
frontmatter (adds type: Added + pr: 821) so docs-lint can consume the
fragment.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#770): add gsd-config-reload.js to INVENTORY.md and regenerate manifest

The feat commit added hooks/gsd-config-reload.js but did not bump the
Hooks count in docs/INVENTORY.md (14→15) or add the new row, and did not
regenerate docs/INVENTORY-MANIFEST.json. Both inventory-counts and
inventory-manifest-sync tests failed across the full CI matrix.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#770): make lifecycle-hook tests deterministic on scoped runner

Replace the shared hooks/dist/ ensemble setup (ensureHooksDist /
teardownHooksDist) in the Claude hook tests with per-test isolation:
pre-populate each test's own tmpDir/.claude/hooks/ with stub files and
pass installerMigrations:[] to install() so the first-time-baseline
migration does not remove the stubs before the copy step can run.

Root cause: hooks/dist/ is gitignored and absent on a fresh npm ci.
ensureHooksDist() created it and teardownHooksDist() deleted it, but
with --test-concurrency=4 both test files ran concurrently as separate
Node.js worker processes sharing the same filesystem.  One file's
afterEach teardown deleted hooks/dist/ while the other file's install()
was copying from it, producing an ENOENT (reproduced 2/10 runs locally).

The additional issue: even with pre-placed stubs surviving the copy race,
the 000-first-time-baseline migration classified hooks/gsd-*.js as
bundled-gsd-hook artifacts, auto-removed them, and the copy step never
re-ran (hooks/dist/ absent) — leaving contextMonitorFile missing and all
hook registrations silently skipped (the 'got: []' symptom).

Fix: pre-populate targetDir/hooks/ per-test (isolated temp dir) AND pass
installerMigrations:[] so the baseline scan is skipped.  The Qwen suites
already used this pattern correctly; the Claude suites are aligned to it.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#770): ship gsd-config-reload.js by adding it to build-hooks HOOKS_TO_COPY

The #770 feature added hooks/gsd-config-reload.js and registered it in
MANAGED_HOOKS, the installer, INVENTORY, and the test EXPECTED_ALL_HOOKS
list — but never added it to scripts/build-hooks.js HOOKS_TO_COPY. As a
result the hook was never copied into hooks/dist/ during the build, so:

  - the hook would never ship to users (real production bug — the
    FileChanged config-reload feature was dead-on-arrival), and
  - install-minimal-hooks.test.cjs #1755 ("all expected hooks are copied
    from hooks/dist/ to target", ".js hooks are executable after copy",
    "manifest contains .js hook entries") failed on any environment with
    a clean checkout (no pre-existing hooks/dist/): coverage, full test
    macos-22/macos-24, test ubuntu-24.

The failures were masked locally only by a stale hooks/dist/ left from a
prior build (build-hooks copies into dist without clearing it). On CI's
fresh `npm ci` there is no dist, so the omission surfaced.

Fix: add 'gsd-config-reload.js' to HOOKS_TO_COPY so build-hooks stages it
into hooks/dist/ alongside the other JS hooks. Verified by removing
hooks/dist/ and rerunning the full suite green (0 fail).

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#770): make config prototype-pollution beforeEach deterministic on scoped runner

Root cause: the #663 and alert-#26 prototype-pollution describe blocks
seeded .planning/config.json in beforeEach via a bare
runGsdTools('config-ensure-section') whose result was discarded. That
command runs in a spawned gsd-tools child; on the scoped CI lane
(--test-concurrency=4, config.test.cjs scheduled alongside the heavy
install/tarball suites that #770 pulled into the targeted set) the child
can be transiently killed under resource pressure (non-zero exit, empty
stderr — an OS-level kill, not an app error). The swallowed failure left
config.json absent, so the first subtest's readConfig() threw ENOENT
opening <tmp>/.planning/config.json. Only 1 of 4 subtests failed,
confirming a per-invocation transient, not a deterministic miss; the full
suite schedules files differently so config.test.cjs did not collide with
those heavy neighbors → passed there.

Fix: add ensureConfigReady(tmpDir) which retries config-ensure-section on
ANY failure or missing file and throws a clear diagnostic if it still
cannot create config.json, then use it in both prototype-pollution
beforeEach blocks. Setup is now deterministic under load; the #663/alert-#26
security assertions are unchanged.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#844): sync runtime manifest versions on npm version bump (#845)

* fix(#844): sync runtime manifest versions on npm version bump

The release workflow bumps package.json via `npm version` but never
stamped the runtime-integration manifests that must track it
(.claude-plugin/plugin.json #766, gemini-extension.json #775), so the
first RC/finalize whose version diverged from the -dev stream failed the
test suite before tagging/publishing.

Add scripts/sync-manifest-versions.cjs (single VERSIONED_MANIFESTS
registry) wired to a `version` npm lifecycle hook that stamps + stages
the manifests on every `npm version` — covering all four release bump
sites and local bumps with no workflow edits. A regression guard test
fails if any repo JSON whose version matches package.json is not
registered, forcing future version-bearing manifests into the sync.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* docs(#844): add changeset for manifest version sync fix

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>

* chore: bump to 1.4.0-rc.2

* chore: finalize v1.4.0

* chore: promote CHANGELOG for v1.4.0

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>
Co-authored-by: Colin <colin@solvely.net>
Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
Co-authored-by: Joe <44273333+jslitzkerttcu@users.noreply.github.com>
Co-authored-by: Solvely-Colin <211764741+Solvely-Colin@users.noreply.github.com>
2026-06-08 14:37:33 -04:00
Tom Boucher
463cffd894 chore(#604): rename get-shit-done/ runtime directory to gsd-core/ (#615)
* chore(#604): rename get-shit-done/ runtime directory to gsd-core/

Renames the installed runtime directory `get-shit-done/` to `gsd-core/` so the
on-disk name matches the package (`@opengsd/gsd-core`), repo, and binary
(`gsd-tools`). The npm package name and binary are unchanged; npx/npm consumers
are unaffected.

Mechanical (bulk, ~90% of the diff):
- `git mv get-shit-done gsd-core`
- Swept path/identifier references across the repo via
  `perl -pe 's/get-shit-done(?!-\w)/gsd-core/g'`. The negative lookahead
  preserves the five legitimate slug variants that are NOT the directory:
  get-shit-done-{OLD,cc,classic,cli,redux} (old package/repo names).
- Build/manifest wiring: package.json (bin, files, coverage globs),
  tsconfig.build.json (outDir), ~86 .gitignore build-output entries,
  stryker.config.mjs, scan-ignore files, install.js path strings.
- Frozen (not rewritten): CHANGELOG.md history; translated docs
  (README.<locale>.md and docs/{ja-JP,ko-KR,pt-BR,zh-CN}/).

New logic (review here):
- src/installer-migrations/003-rename-get-shit-done-to-gsd-core.cts: a proper
  ADR-0008 installer migration. On upgrade it walks the legacy
  `~/.claude/get-shit-done/` tree, classifies each file via the prior install
  manifest, and emits remove-managed / backup-and-remove for managed files
  while PRESERVING unknown user-added files. Symlink-safe (skips a symlinked
  root and symlinked entries; bounds-checks every path under configDir). The
  framework rolls back on install failure. Emptied dirs may remain (framework
  has no recursive dir-removal primitive) — documented.
- scripts/lint-legacy-dir-name.cjs: CI regression guard forbidding the bare
  `get-shit-done` directory token (split token to avoid self-match; case-
  insensitive; `(?!-\w)` lookahead allows the slug variants; allowlists
  CHANGELOG, translated docs, and `gsd-allow-legacy-name` marker lines).
  Wired into the lint-tests CI job.
- Restored scripts/lint-package-identity-drift.cjs detection regexes (the
  mechanical sweep had wrongly rewritten the old-name patterns it exists to
  detect) and marked them as intentional legacy references.
- TDD tests for the migration and the guard; do.md slash-command guard regex
  tightened so a `/gsd-core/bin` path segment is not mistaken for a command;
  changeset + docs/installer-migrations.md row added.

Breaking: the installed runtime path moves `~/.claude/get-shit-done/` ->
`~/.claude/gsd-core/`. Migration 003 removes the stale legacy dir's managed
files (preserving user files) on upgrade. Users with custom hooks/configs
hardcoding the old path must update them.

Closes #604

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#604): unsweep pending changesets + allowlist injection-example docs

CI fixes for the rename PR:
- Do not sweep pending .changeset/*.md (ephemeral release-note fragments,
  like CHANGELOG); reverted those body edits so 5 pre-existing malformed
  fragments (missing type/pr) no longer enter the PR diff and trip docs-lint.
  Allowlisted .changeset/ in the legacy-name guard accordingly.
- Allowlisted TEST-EXAMPLES.md and docs/explanation/security-model.md in
  prompt-injection-scan.sh: they contain intentional injection examples /
  security-model prose; the path-reference rewrites are kept.

CodeQL alerts on this PR are pre-existing (alert lines unchanged by this PR;
none in the new migration/guard) and are out of scope for the rename.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#604): resolve CodeQL alerts surfaced on this PR

The rename diff touched files carrying pre-existing CodeQL findings; per the
no-pre-existing-dismissal rule, fixing every surfaced alert rather than waving
them off. All behavior-preserving:

- scripts/ci-test-scope.cjs: build the config-path match from string
  .includes() instead of a RegExp over an arg-derived value (js/regex-injection).
- src/profile-output.cts: escape backslashes before pipe-escaping desc/safeName
  so the table-cell escape is complete (js/incomplete-sanitization).
- tests/{bug-2643,bug-2808,docs-parity-live-registry}: two-pass HTML-comment
  strip so a bare/unclosed `<!--` cannot survive (js/incomplete-multi-character-sanitization).
- tests/inline-plan-threshold: drop the no-op `\s`->`\s` identity replace,
  keep the meaningful POSIX-class conversion (js/identity-replacement).

Verified: build:lib green; the touched test files + ci-test-scope + profile-output
suites pass; lint:legacy-name clean.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#604): correctly resolve remaining CodeQL alerts (regex-injection + sanitization)

The prior commit's fixes for two alerts were ineffective:
- ci-test-scope.cjs js/regex-injection: the alert is the CLI-arg-derived `file`
  reaching static regex `.test(file)` calls (not the config rule). Removed ALL
  regex over file/t — startsWith/includes/=== string checks + an isWindowsHint
  helper — so there is no regex sink for the tainted value.
- js/incomplete-multi-character-sanitization (3 test files): a single
  `.replace(/<!--...-->/g,'')` can let `<!--` re-form. Replaced with a fixpoint
  loop (replace until stable) plus a final bare-opener strip.

Verified: no regex over file/t remains; ci-test-scope + the 3 test suites pass;
lint:legacy-name clean.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#604): make ci-test-scope + comment-strippers regex-free to clear CodeQL

CodeQL flags the regex PATTERNS syntactically (regex-injection on the
--files arg split; incomplete-multi-character-sanitization on the <!--...-->
replace), so loop fixes do not satisfy it. Made these paths regex-free:
- ci-test-scope.cjs splitFiles: char-by-char separator tokenizer (no /[,\\s]+/).
- 3 test files: indexOf/slice HTML-comment stripper (no .replace(/<!--/)).
Behavior preserved; ci-test-scope + the 3 suites pass; guard clean.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#604): unblock security base64 scan on the large rename diff

The security job hit its 10m timeout: base64-scan.sh choked on the binary
test fixture tests/feat-3594-parser-property-style.test.cjs (embedded NUL/
non-UTF8 bytes -> thousands of bogus blobs + "ignored null byte" warnings),
and the ~800-file rename diff is slow to scan regardless.

- scripts/base64-scan.sh: skip binary-by-content files (grep -Iq .) — they
  can't carry base64-obfuscated *text* and feeding NUL bytes through the
  per-line scanner is pathologically slow. collect_files already filtered
  binary *extensions*; this catches binary *content* in text extensions.
- .github/workflows/security-scan.yml: raise the security job timeout 10m->30m
  to accommodate very large diffs (the scan itself is unchanged).

Verified locally: scan skips the fixture, 0 "ignored null byte" warnings,
0 findings, exit 0.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#604): sweep get-shit-done refs introduced by merging next

The branch was updated with next (#614/#384/#618 etc.), which reference the
get-shit-done/ dir (still named that on next). Swept the stale references in
the merged files to gsd-core so the rename stays consistent and lint:legacy-name
passes:
- commands/gsd/discuss-phase.md (runtime-launcher shim paths)
- src/core.cts (getAgentsDir layout comments)
- tests/bug-384-agents-runtime-aware.test.cjs (require path to runtime lib)

Verified: guard 0 violations; build green.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#604): exclude gsd-core/ path segments from bug-3683 command cross-ref invariant

The #614 runtime-launcher shim added to discuss-phase.md references
`${_GSD_RUNTIME_ROOT}/gsd-core/bin/...`. bug-3683's REF_PATTERN excluded path-y
refs only via lookbehind, but `}` precedes `/gsd-core/` in the shim, so it
mis-read the directory path as a dangling `/gsd-core` command ref (same class as
the #604 bug-2954 fix). Added a trailing `(?![\w-]*\/)` so `/gsd-<x>/...` path
segments are not treated as slash-command references.

Verified locally on BOTH platforms before pushing:
- mac (node 26) full suite: 0 failures
- gsd-test-runner (linux, node22 image) full suite: 0 failures
- bug-3683 + bug-2954 pass.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#604): lazily resolve findProjectRoot in gsd-tools (harden flaky CI)

CI intermittently failed state.test's gsd-tools subprocess with
"findProjectRoot is not a function" (flip-flopping across legs; not reproducible
on mac full suite, gsd-test linux full suite, test:unit, or state.test x8).
findProjectRoot is a re-export from core.cjs (sourced from project-root.cjs);
binding it via destructure at module-load can be undefined under a load-ordering
edge. Resolve it lazily at call time via a small wrapper so the lookup happens
after core.cjs is fully initialized.

Verified green on BOTH platforms before pushing:
- mac (node 26) full suite: 0 failures
- gsd-test-runner (linux, node22) full suite: 0 failures
- state.test.cjs: 106/106; gsd-tools loads cleanly.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#604): allowlist verification-patterns.md placeholder examples in secret scan

The rename git-mv'd references/verification-patterns.md into gsd-core/, pulling
it into the secret-scan diff. It documents stub/placeholder RED-FLAG env-var
examples (illustrative Stripe test-key / database-URL / API-key placeholders) —
not real credentials. Added it to .secretscanignore with the strict annotation,
mirroring the existing gsd-core/workflows/plan-phase.md exception.

Verified locally: secret-scan-lint --strict OK; secret-scan --diff origin/next
exits 0 with 0 findings.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>
2026-06-02 18:35:29 -04:00
Tom Boucher
a28dcec981 chore(#597): replace count-based ratchet guards with AST lint + named-set allowlists (#603)
The windows-test-parity ratchet greps test source for fs.rmSync-without-
maxRetries (and six other Windows-portability anti-patterns), failing when an
integer offender COUNT exceeds a frozen baseline (rmSync: 95). A count ratchet
is a Goodhart metric: fixing one offender and adding another keeps the count
constant, so a new defect slips through green. Replace it — and every other
count ratchet in the repo — with a layered, masking-proof design.

Behavioral seam test
- tests/helpers-cleanup.test.cjs proves helpers.cleanup() carries the Windows
  EBUSY retry budget. cleanup() delegates retries to Node's fs.rmSync via
  maxRetries (it owns no loop), so the test asserts the option contract
  (recursive/force/maxRetries>0/retryDelay>0) + real-FS removal + the cwd-guard,
  rather than a loop that does not exist. The EBUSY risk is now tested ONCE at
  the helper, not approximated textually at every call site.

Write-time ESLint rule (AST-accurate, replaces the grep)
- eslint-rules/no-raw-rmsync-in-tests.cjs (error in tests/**/*.test.cjs) bans
  raw fs.rmSync, steering to cleanup(). Catches member, computed (fs['rmSync']),
  destructured and aliased forms; escape hatch is inline
  `// eslint-disable-next-line local/no-raw-rmsync-in-tests -- <reason>` only.
- Migrated 336 raw fs.rmSync teardown calls across ~116 test files to cleanup().
  ~18 genuinely load-bearing sites (mid-test SUT/fault-injection removals,
  error-swallowing or name-colliding local teardown helpers) keep the raw call
  with an inline eslint-disable + reason.

Shared anti-ratchet primitive
- scripts/lib/allowlist-ratchet.cjs:
  - assertWithinAllowlist: fails on NOVEL ids (new offender introduced) AND on
    STALE ids (a known offender was fixed but not pruned) — identity, not count,
    and a ratchet DOWN toward zero.
  - assertTightCeiling: a size/length budget whose ceiling must stay within a
    grace band of the high-water mark, so budgets may only tighten, never creep.

Ratchets converted onto the primitive
- windows-test-parity-guard.test.cjs: rmSync rule deleted (now ESLint-enforced);
  the remaining six patterns moved from integer baselines to named-set
  allowlists with ratchet-down.
- scripts/lint-test-file-count.{cjs,allowlist.json}: per-module integer counts →
  named filename sets (closes the swap-a-file-keep-the-count blind spot); a
  module dropping under cap now FAILS to force pruning its allowlist entry.
- enh-2790 skill-count `<= 63` → named skill allowlist (ratchets toward ~58).

Size budgets hardened (tighten-only)
- agent-size / workflow-size / feat-3039 help-tiered: ceilings lowered to the
  current high-water mark and an assertTightCeiling anti-creep check added per
  tier. Fixed external-contract limits (description ≤100 chars, agent ≤100 KB)
  are intentionally left as-is — they are not grandfathered creeping budgets.

No user-facing behavior change (tests + tooling only); no USER_FACING_PREFIXES
touched, so no changeset fragment is required.

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>
2026-06-01 22:43:49 -04:00
Tom Boucher
b735f270c5 chore(#469): clear residual warn-level lint in effort test files (#470)
Remove unused `os` import left by #463's effort-API conversion and fix
two no-useless-escape chars in codex-config test description string.
Part of ESLint harness cleanup effort (#452).

Co-authored-by: CI Rebase Check <ci@gsd-redux>
Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-05-29 12:25:27 -04:00
Tom Boucher
b8c33647d8 refactor(tests): retire output-grep & source-grep via typed surfaces (finish #2974) (#462)
* refactor(#455): implement typed surfaces to retire grep tests

Production surfaces added:
- hooks/managed-hooks-registry.cjs: new CJS module exporting MANAGED_HOOKS
  as a typed array; gsd-check-update-worker.js now requires it instead of
  declaring an inline array
- bin/install.js: elevate inline gsdHooks to module-level GSD_UNINSTALL_HOOKS,
  export it alongside runtimeMap/allRuntimes (already exported)
- scripts/build-hooks.js: export HOOKS_TO_COPY; guard build() behind
  require.main===module so tests can require the file without triggering a build
- get-shit-done/bin/lib/init.cjs: add --json mode to agent-skills command,
  emitting typed IR { agent_type, block, skills_count } for test assertions
- get-shit-done/bin/gsd-tools.cjs: wire --json flag for agent-skills dispatch

Category-B source-grep migrations:
- tests/managed-hooks.test.cjs: require MANAGED_HOOKS from registry, drop fs.readFileSync+regex
- tests/orphaned-hooks.test.cjs: require MANAGED_HOOKS+HOOKS_TO_COPY as typed exports
- tests/hooks-opt-in.test.cjs: replace gsdHooks regex-parse with GSD_UNINSTALL_HOOKS import
- tests/install-minimal-hooks.test.cjs: replace gsdHooks regex-parse with GSD_UNINSTALL_HOOKS
- tests/copilot-install.test.cjs: replace src.includes() checks with typed
  assertions on runtimeMap, allRuntimes, parseRuntimeInput, buildRuntimePromptText
- tests/agent-skills.test.cjs: migrate to --json typed IR assertions

pending-migration-to-typed-ir token cleared (87 of 87 files):
- 78 files already had source-text-is-the-product; removed duplicate token
- 5 files already used typed assertions; reclassified or annotated
- 4 files required individual reclassification to source-text-is-the-product
  or architectural-invariant

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(#455): update workflow-guard test to typed GSD_UNINSTALL_HOOKS import; isolate HOME in runtime-launcher (D) test

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(#455): guard install.js main() behind require.main===module so the typed export is require-safe

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* docs(#455): document --json typed surfaces for agent-skills, progress, validate context

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* docs(#455): add changeset fragment for new --json surfaces

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(#455): complete grep migration for files flagged by lint-tests

The branch commit 4e630d99 stripped `allow-test-rule: pending-migration-to-typed-ir`
from ~80 test files without replacing their assertions or adding the correct
exemption annotation. The files were NOT source-grep tests — they read .md
workflow/agent/command/reference files (source-text-is-the-product) or hook
source files for structural invariants (structural-regression-guard). No
assertion logic was changed; only the correct allow-test-rule annotation was
added to each file per CONTRIBUTING.md exception matrix.

73 files: `source-text-is-the-product` — workflow/agent/command/reference .md
7 files:  `structural-regression-guard` — hook .js / bin/install.js structural checks

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: CI Rebase Check <ci@gsd-redux>
Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-05-29 11:39:52 -04:00
Tom Boucher
2d3027767b fix(3426): Codex Windows hooks use .cmd shim to avoid POSIX exec fail (#3768)
* test(#3426): add RED test for Codex Windows hooks .cmd shim requirement

Drive buildCodexHookWindowsShimIR (typed IR) + ensureCodexHooksJsonSessionStart
integration against mocked win32 platform. Counter-tests confirm darwin/linux
paths remain unchanged.

NOTE: Windows wall-clock verification depends on Docker matrix Windows
runners. Local test exercises the generator IR shape only.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* fix(#3426): Codex Windows hooks use .cmd shim to avoid bash.exe POSIX-exec failure

Root cause: Codex on Windows runs hook commands from PowerShell/cmd. The previous
hooks.json command format was `"node.exe" "script.js"`. Codex's hook-dispatch shell
(Git Bash / MSYS) tried to POSIX-exec node.exe (a Windows PE binary) via execvp(),
which fails with ENOEXEC — reported as `bash.exe: cannot execute binary file`.

Fix: `ensureCodexHooksJsonSessionStart` now calls `buildCodexHookWindowsShimIR` on
win32 to write a .cmd shim alongside the .js hook file. cmd.exe executes .cmd files
natively via CreateProcess, bypassing the POSIX exec layer entirely. Non-Windows
paths (darwin, linux) are unchanged: they continue to use the node-runner command.

Also adds `gsd-check-update.cmd` to the codex-hooks-json managed-basename set so
reconcileCodexHooksJsonSessionStart correctly replaces stale node-runner entries on
reinstall.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* chore(3426): update changeset to reference PR #3768

* fix(3426): fail-loud on Codex Windows shim-write failure instead of silently restoring broken command

Replace the silent fallback to `projectManagedHookCommand` (the old
`node.exe script.js` form) with an explicit warn-and-skip path.

When `atomicWriteFileSync` fails to write the `.cmd` shim, the previous
code silently called `reconcileCodexHooksJsonSessionStart` with the
legacy node-runner command. That command triggers the exact
`bash.exe: cannot execute binary file` POSIX-exec failure that #3426
exists to fix — so a successful-looking install was secretly restoring
the original bug.

New behaviour:
- Emit `console.warn` with the failure reason and a remediation hint,
  matching the `${yellow}⚠${reset}  Skipped …` idiom used at line 9098.
- Return `{ changed: false, wrote: false }` to skip registration for
  this runtime entirely, so the outer caller can surface "NOT installed"
  instead of "installed (but broken)".

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* test(3426): typed-IR assertions on .cmd shim eol/quoting/passthrough + IR extension

Extend `buildCodexHookWindowsShimIR` to expose two new typed fields on
the returned IR object (CONTRIBUTING.md L558-L565 IR-first discipline):

  eol: { cmd: '\r\n' }   — CRLF is canonical for cmd.exe .cmd files
  passthroughArgs: true  — shim forwards all args via %*

Add a new describe block (Step 2b) with three IR-level assertions:

1. `eol.cmd === '\r\n'` — prevents silent EOL regression that could
   break parsing on Windows versions that require CRLF.
2. `invocation.target` is the raw unquoted path (no shell-metachar
   leakage) — quoting happens only at render time.
3. `passthroughArgs === true` — the %* forwarding contract is
   explicitly typed so regressions fail before the text is rendered.

All assertions operate on the typed IR returned by the generator, NOT
on the rendered `.cmd` file content — text-matching is the anti-pattern
CONTRIBUTING.md L522-582 prohibits.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* test(3426): fix Windows CI failures — update hook-command filter patterns

Four test files filtered for managed hooks in hooks.json using the
literal string `gsd-check-update.js`.  On Windows the PR-introduced
.cmd shim changes the hooks.json command to
`"path/gsd-check-update.cmd"` (no node prefix, .cmd extension), so
those filters matched 0 entries and 24 Windows subtests failed.

Fixes:
- bug-2760-codex-install-defensive.test.cjs (7 filters): change
  `/gsd-check-update\.js/` → `/gsd-check-update/` to match both
  .js (POSIX) and .cmd (Windows) commands.
- bug-3357-codex-legacy-hooks-json-migration.test.cjs (3 filters):
  same `.js` → no-extension change.
- bug-3427-3433-codex-install-shape.test.cjs (2 filters): same fix;
  add explanatory comment to uninstall assertion.
- codex-config.test.cjs (9 filters + 1 exact-command assertion):
  bulk-replace all `hooksJsonCommands.filter(cmd => cmd.includes('gsd-check-update.js'))`
  with `gsd-check-update`; make the `fresh CODEX_HOME` test platform-
  aware — on win32 assert `.cmd` shim path, on POSIX assert the
  existing `"runner" "script.js"` form (#3017).

All four suites pass locally (macOS / darwin).  Windows subtests
verified against the Windows CI failure log patterns.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix(3426): address pr-review-toolkit + codex review findings

- fix(uninstall): add gsd-check-update.cmd to gsdHooks cleanup list so
  the .cmd shim is removed from disk on Windows uninstall (was left as
  orphan artifact — silent failure post-uninstall)
- test(3426): add uninstall test asserting gsd-check-update.cmd is
  deleted from hooks dir after `uninstall(true, 'codex')` (no coverage existed)
- fix(comment): correct JSDoc on buildCodexHookWindowsShimIR — shim
  content is three-line @ECHO OFF/@SETLOCAL/@runner snippet, not bare
  `@node "script.js" %*` as the old comment claimed
- fix(comment): update stale assertion message in codex-config.test.cjs
  L1457 — said "config.toml references it" but the hook is in hooks.json

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

---------

Co-authored-by: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-05-20 23:13:50 -04:00
Tom Boucher
1746f89ac7 fix(3566): narrow scope; update codex-config tests for canonical hooks key
Two follow-up adjustments after running the full suite:

1. Reverted the rewriteTomlKeyLines() change. The original
   `match.keyRaw || key` fallback respects user ownership of pre-existing
   legacy lines (#2760 defensive principle). My fix now applies the
   canonical-vs-legacy split at the INSERTION points only: fresh installs
   write `hooks = true`, but a pre-existing user-authored
   `codex_hooks = true` is preserved verbatim. Codex's own runtime
   legacy_key alias handles backward-compat at the Codex layer.

2. Updated 12 test cases in tests/codex-config.test.cjs that pinned the
   old fresh-write key. These assertions now expect canonical `hooks` for
   fresh-write scenarios; tests covering legacy-line preservation already
   pass against the narrowed fix without further edits.

Also updated bug-3566 regression-test cases for the legacy-preservation
path — they now verify that user-owned `codex_hooks` survives an install.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-15 14:22:32 -04:00
Tom Boucher
d4d4178603 Merge pull request #3483 from radioflyer28/feat/agent-launch-reasoning-transport-3474
feat: transport resolved reasoning effort to agent launches
2026-05-14 20:01:32 -04:00
Tom Boucher
44e65428e0 test(codex): harden hooks.json sessionStart test helper 2026-05-14 13:46:34 -04:00
Tom Boucher
9dc9e37445 test(codex): align hook assertions with hooks.json 2026-05-14 13:38:41 -04:00
radioflyer28
810778e137 fix(sdk): gate reasoning effort by runtime allowlist 2026-05-13 22:27:15 -04:00
radioflyer28
f70829d067 feat: transport resolved reasoning effort 2026-05-13 19:43:28 -04:00
Tom Boucher
26dcdb1ad0 Refactor SDK-first architecture seams (#3316)
* refactor: tighten sdk-first architecture seams

Refs #3312

* refactor: finish state document seam cleanup

Refs #3312

* test: harden minimal install cleanup assertion

* ci: support sdk-scoped package lock

* fix(3316): restore root package-lock.json and align changeset pr ref

Reverts dec57a83 ("ci: support sdk-scoped package lock") and restores
the root package-lock.json that c249d34d deleted. The deletion was the
wrong direction:

- The root package.json declares its own runtime and dev deps
  (@anthropic-ai/claude-agent-sdk, ws, c8). Without a root lockfile,
  `npm install --no-package-lock` resolves whatever satisfies semver at
  install time — CI today and CI in six months can install different
  transitive trees, defeating reproducibility.
- The lockfile has been part of every release on this repo (long
  history on main); removing it loses the npm audit / Dependabot
  target without compensating benefit.
- The CI workaround pattern (cache-dependency-path: sdk/package-lock.json
  + `npm install --no-package-lock`) papered over the symptom rather
  than fix the cause.

Also fix the changeset pr: from 3312 (issue) to 3316 (PR). CONTEXT.md
flags this exact failure mode as a recurring CodeRabbit finding.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: address coderabbit review findings

* fix: close remaining coderabbit threads

---------

Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-09 14:21:42 -04:00
Tom Boucher
8e25eb6546 fix(#3017): codex SessionStart hook uses absolute node, not bare 'node' (#3022)
* fix(#3017): codex SessionStart hook uses absolute node, not bare 'node'

PR #3002 fixed #2979 for settings.json-based managed JS hooks (Claude
Code, Gemini, Antigravity) by routing through buildHookCommand() →
resolveNodeRunner(), emitting the absolute Node binary path so hooks
resolve under GUI/minimal-PATH runtimes (/usr/bin:/bin:/usr/sbin:/sbin)
where nvm/Homebrew/Volta-installed node is not on PATH.

The Codex install path bypassed both helpers — line 7935 of bin/install.js
wrote `command = "node ${path}"` directly into config.toml. So Codex
SessionStart hook still failed with exit 127 ("node: command not found")
under the same minimal-PATH conditions PR #3002 was meant to close.

Fix:
- Add buildCodexHookBlock(targetDir, { absoluteRunner, eol }) — a pure
  helper that emits the toml hook block with the absolute runner. Returns
  null when absoluteRunner is null so the caller skips registration with
  a warning instead of writing a broken bare-node hook.
- Add rewriteLegacyCodexHookBlock(content, absoluteRunner) — mirror of
  rewriteLegacyManagedNodeHookCommands for the toml surface, so
  reinstall migrates a 1.39.x bare-node config.toml to the absolute form.
  Uses basename equality (CODEX_MANAGED_HOOK_BASENAMES set) so user-
  authored bare-node hooks are left alone.
- Replace the inline string-concat at line 7935 with a call to the new
  helper, threaded with the detected line ending so CRLF files stay CRLF.
- On the codex reinstall path, call rewriteLegacyCodexHookBlock first so
  existing bare-node entries get migrated before the new entry is added.

Tests:
- bug-3017-codex-hook-absolute-node.test.cjs (9 tests, all typed-IR):
  - buildCodexHookBlock emits absolute runner, parses to expected fields
  - returns null on missing runner (caller skips)
  - integrates with resolveNodeRunner() in the live process
  - rewriteLegacyCodexHookBlock migrates managed bare-node entries
  - leaves user-authored bare-node hooks alone (basename allowlist)
  - leaves entries with absolute runner unchanged (idempotent)
  - returns content unchanged when absoluteRunner is null
- codex-config.test.cjs e2e expectation updated to match new shape:
  parsed.hooks.SessionStart[0].hooks[0].command now equals
  '"<process.execPath>" "<hookPath>"' instead of 'node <hookPath>'.

Verification:
- 9/9 pass on the new regression test
- 179/179 pass across all codex-touching test files
- 6767/6767 pass on full suite, lint-no-source-grep clean
- Adheres to typed-IR / CONTRIBUTING.md "Prohibited: Raw Text Matching":
  parseCodexHookBlock returns a typed record; assertions are on
  structured fields (runner, hookPath, type, hasMarker), not stdout regex.

Closes #3017

* test(#3017): tighten runner assertions to exact process.execPath (CR)

CodeRabbit on PR #3022 (3 findings, 2 actionable + 1 nitpick):

1. .changeset/codex-bare-node-fix.md:3 — replace `pr: TBD` with
   `pr: 3022` so changeset metadata is traceable.

2. tests/bug-3017-codex-hook-absolute-node.test.cjs:81-146 — the test
   asserted `parsed.runner !== 'node'` and `parsed.runner.includes('/node')`,
   which would false-positive on any absolute path containing '/node'
   (e.g. /Users/x/notnode/foo). Tightened to compare against the EXACT
   absolute path supplied by the caller (after stripping toml + JSON
   escape layers via a new unescapeRunner() helper). The live-process
   integration test now compares against process.execPath exactly. The
   rewriteLegacyCodexHookBlock test also uses exact-equality.

3. Nitpick (skipped): use repository's TOML parser for parsing instead
   of bespoke regex. The hand-rolled parser is small, scoped, and
   fully tested by these structural assertions; pulling in a TOML lib
   for tests would create a circular dependency on the SUT (the
   installer's own parser). Leaving as-is.

Verification: 9/9 pass on regression test, 6767/6767 full suite, lint clean.
2026-05-02 11:45:30 -04:00
Tom Boucher
918f987a19 feat(#2982): extend no-source-grep lint to catch var-binding readFileSync.includes() (#2985)
* feat(#2982): extend no-source-grep lint to catch var-binding readFileSync.includes()

The base lint (scripts/lint-no-source-grep.cjs) only catches
readFileSync(...).<text-method>() chained directly. The much more
common var-binding form escapes it:

  const src = fs.readFileSync(p, 'utf8');
  // 50 lines later
  if (src.includes('foo')) {}        // ← still grep, lint missed it

Scan of the test suite found ~141 files using this pattern.

Implementation built TDD per #2982 with structured-IR assertions:

  scripts/lint-no-source-grep-extras.cjs
    - detectVarBindingViolations(src) — pure detector, two passes:
      pass 1 collects vars bound from readFileSync, pass 2 finds any
      <var>.<includes|startsWith|endsWith|match|search>( on those vars.
    - detectWrappedAssertOkMatch(src) — flags
      assert.ok(<expr>.match(...)) which escapes the assert.match rule.
    - VIOLATION enum exposes stable codes for tests to assert on.

  scripts/lint-no-source-grep.cjs
    - Wires the new detectors into the existing per-file check; one
      additional violation row per file with the first 3 sample tokens.

  tests/bug-2982-lint-var-binding.test.cjs
    - 13 tests, all assertions on typed VIOLATION enum / structured
      records. Covers all 5 text-match methods, multi-var, no-bind,
      string literal (must NOT trigger), wrapped assert.ok(.match),
      and assert.match (must NOT double-flag).

Migration backlog (#2974 expanded scope):

  - 42 files annotated `// allow-test-rule: source-text-is-the-product`
    (legitimate — they read .md/.json/.yml files whose deployed text
    IS the product)
  - 3 files annotated `// allow-test-rule: pending-migration-to-typed-ir [#2974]`
    (read .cjs/.js source — clear migration debt)
  - 95 files annotated `pending-migration-to-typed-ir [#2974]` with
    `Per-file review may reclassify as source-text-is-the-product
    during migration` (mixed — manual review under #2974)

After this lands the lint reports 0 violations on main; new
violations in PRs surface immediately.

Closes #2982
Refs #2974

* test(#2982): fix truncated test name per CR

The label ended with a bare '(' from a copy-paste mishap. Now reads
'does NOT flag .matchAll(...) — matchAll is not match, so
assert.ok(.matchAll(...)) is not flagged'.

* chore(#2982): add changeset fragment for PR #2985

* chore(#2982): add changeset fragment for PR #2985
2026-05-01 19:50:10 -04:00
Tom Boucher
3c03a153a5 fix(#2773): emit correct Codex 0.124.0+ two-level nested hooks schema (#2809)
* fix(#2773): emit correct Codex 0.124.0+ two-level nested hooks schema

Codex 0.124.0's stable spec requires:

  [[hooks.SessionStart]]          ← event entry (optional matcher)

  [[hooks.SessionStart.hooks]]    ← handler sub-table
  type = "command"
  command = "node ..."

Previous GSD versions wrote the flat [[hooks]] + event = "SessionStart"
form (#2637) or a single-block [[hooks.SessionStart]] without the nested
.hooks sub-table (#2760). Both are rejected by Codex 0.124.0+ at launch.

Changes:

bin/install.js
  - Hook block emission now always writes the two-level nested AoT form.
  - migrateCodexHooksMapFormat extended to also migrate flat [[hooks]]
    array-of-tables entries (event = "..." key → [[hooks.<EVENT>]] form).
    Flat [[hooks]] and [[hooks.<EVENT>]] are mutually exclusive TOML types;
    any pre-existing flat entries must be promoted before GSD appends its
    own namespaced hooks.
  - Migrated flat AoT blocks are inserted BEFORE the GSD marker so they
    stay in the "user" portion of the file and survive stripGsdFromCodexConfig.
  - stripCodexGsd* regexes cover all four historical block shapes.
  - validateCodexConfigSchema no longer rejects flat [[hooks]] at the root
    level (removing the false-positive that blocked install when users had
    their own AfterCommand hooks). The validator still enforces the nested
    [[hooks.<EVENT>.hooks]] shape for entries that have a .hooks sub-table.

tests/
  - bug-2760-codex-install-defensive.test.cjs: 29/29 passing.
    Added 5 new regression cases for fresh install, upgrade from each
    legacy shape, idempotent reinstall, and user hook preservation.
  - codex-config.test.cjs: 106/106 passing.
    All migration tests updated to assert [[hooks.<TYPE>.hooks]] sub-table
    (command now in handler level, not event-entry level).
    New tests: flat [[hooks]] migration (SessionStart, AfterCommand),
    install+uninstall preserves non-GSD AfterCommand hook.

Closes #2773

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* fix: address CodeRabbit review + CI regression in bug-2698-crlf-install

CI regression (#2698 tests):
  Strip GSD-managed hook blocks BEFORE running migrateCodexHooksMapFormat.
  The previous order let migration convert the stale [[hooks]] + event =
  "SessionStart" + gsd-update-check.js block to [[hooks.SessionStart]] form
  before Shape 1 strip regex could match it; Shape 1 only matches the flat
  [[hooks]] form, so the stale block survived reinstall. Swapping to
  strip-then-migrate ensures only user-authored hooks reach the migration step.
  Shape 3/4 regexes also extended to match both gsd-check-update.js and the
  legacy gsd-update-check.js filename so no variant slips through.

CodeRabbit actionable (major):
  migrateCodexHooksMapFormat now accepts single-quoted TOML event values
  (event = 'SessionStart') in the flat [[hooks]] filter and event-name
  extractor. TOML spec allows single-quoted literal strings; double-quote-only
  regexes silently skipped them, leaving the block unmigrated and triggering
  the hard-fail validator.

CodeRabbit nitpicks:
  tests/codex-config.test.cjs: replace indexOf('[[hooks.AfterCommand]]')
  ordering check with parseTomlToObject structural assertions (no-source-grep
  rule).
  tests/bug-2760-codex-install-defensive.test.cjs: replace three
  content.match(/…/g).length raw-text counts with parseTomlToObject structural
  assertions for single-handler and single-event-entry invariants.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* fix: address CodeRabbit review #2 — extractFlatHookEventName helper + type assertions

- bin/install.js: consolidate TOML_QUOTED_STRING + TOML_EVENT_CAPTURE into a
  single extractFlatHookEventName() helper that rejects empty-string event values
  (event = "" or event = ''); previously two independent regexes had to be kept
  in sync and neither guarded against a blank event name producing a [[hooks.]]
  header

- tests/bug-2760-codex-install-defensive.test.cjs: add comments explaining why
  the e.command fallback is retained in both allSessionStartCommands and
  afterToolCommands collectors — migration only upgrades [hooks.TYPE] map-format
  sections, not existing [[hooks.TYPE]] namespaced AoT entries authored with
  command at event-entry level; removing the fallback causes false failures for
  preserved user entries

- tests/codex-config.test.cjs: add type = "command" assertions to all migration
  tests that verify .command but were missing .type checks; buildNestedBlock
  injects type = "command" when the source body has no explicit type key, so
  every migrated handler must carry it per the Codex 0.124.0+ schema

138 tests pass, 0 fail.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* fix: CR round 3 + proactive audit — TOML quoting, stale AoT migration, strict validator

Three real issues from CodeRabbit round 3, plus the collateral improvements they
enable:

bin/install.js — tomlBareKey() helper (#2773 CR6a)
  buildNestedBlock interpolated the raw event name into [[hooks.${type}]] and
  [[hooks.${type}.hooks]] headers without TOML escaping. An event name containing
  spaces or punctuation (e.g. "Before Tool") would produce invalid TOML that
  parseTomlToObject would subsequently reject. Added tomlBareKey() — wraps the
  key in double-quoted TOML strings when it contains non-bare-key characters
  ([A-Za-z0-9_-]).

bin/install.js — staleNamespacedAotSections migration path (#2773 CR6b)
  migrateCodexHooksMapFormat handled [hooks.TYPE] (map-format) and flat [[hooks]]
  with event = "..." but ignored [[hooks.TYPE]] AoT entries that carried handler
  fields (command, type, timeout, statusMessage) at event-entry level without a
  nested [[hooks.TYPE.hooks]] sub-table. This is the pre-#2773 single-block shape
  that Codex 0.124.0+ rejects. Added staleNamespacedAotSections as the third
  migration category: detected by STALE_HANDLER_FIELD_PATTERN + absence of a
  [[hooks.TYPE.hooks]] sub-table in the same file; promoted to the two-level
  nested form by buildNestedBlock. Matcher-only entries (no handler fields) are
  intentionally skipped.

bin/install.js — validator now rejects event-level handler fields (#2773 CR6c)
  With migration covering the stale AoT shape, validateCodexConfigSchema can be
  strict: entries that have handler fields at event-entry level but no .hooks
  sub-array return ok: false instead of silently passing. Matcher-only entries
  (no handler fields and no .hooks) remain valid as event filters.

tests/codex-config.test.cjs — four new migration tests + missing type assertion
  Four tests cover the new stale AoT migration path: single-entry promotion,
  already-nested entry is left untouched (no double-wrap), multiple event types,
  and matcher-only entry is skipped. Added the missing type = "command" assertion
  to the CRLF migration test (the one miss from CR round 2).

tests/bug-2760-codex-install-defensive.test.cjs — strict .hooks-only collectors
  With stale AoT entries now migrated, the entry.command fallbacks in
  allSessionStartCommands and afterToolCommands are dead code. Replaced with
  strict entry.hooks-only collection guarded by an every(Array.isArray(e.hooks))
  pre-assertion, so any future regression that leaves handler fields at event
  level produces an explicit test failure rather than silently collecting them.

142 tests pass, 0 fail.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* fix: CR round 4 — segment-safe quoted-key detection + structural test assertions

bin/install.js — getTomlTableSections now exposes segments (#2773 CR7a)
  The staleNamespacedAotSections filter used section.path.split('.').length > 2
  to skip [[hooks.TYPE.hooks]] sub-table entries. That check misclassifies quoted
  event names containing dots: [[hooks."before.tool"]] has path hooks.before.tool
  (3 dot-parts) but only 2 true parsed segments, so it was incorrectly excluded
  from migration. Fixed by adding segments to the getTomlTableSections return
  shape (already available on record.tableHeader.segments) and replacing the
  split-based check with section.segments.length !== 2, which uses the true
  parsed key count regardless of dots inside quoted names.

tests/codex-config.test.cjs — replace raw-equality assertions (#2773 CR7b)
  The two new no-op migration tests (already-nested and matcher-only) used
  assert.strictEqual(result, content) — raw string equality that conflicts with
  the repo no-source-grep testing standard. Replaced with structural assertions
  using parseTomlToObject: the already-nested test verifies the handler stays
  under .hooks[0] and no double-wrap occurs; the matcher-only test verifies the
  matcher key is preserved and no .hooks sub-array is added.

142 tests pass, 0 fail.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* fix: CR round 5 — parseHooksBody key parser, empty-handler guard, segment-safe legacyMap filter, stronger test assertions

- parseHooksBody: replace /^([\w.]+)\s*=/ regex with parseTomlKey() so
  hyphenated keys (status-message) and quoted keys are not silently dropped
- buildNestedBlock: guard against handlerEntries.length === 0 — do not
  synthesise [[hooks.TYPE.hooks]] with type="command" but no command for
  matcher-only or otherwise handler-empty stale sections
- legacyMapSections filter: use section.segments.length === 2 (same fix
  applied to staleNamespacedAotSections in round 4) to prevent [hooks.X.Y]
  3-segment tables from being misclassified as event entries
- tests: add regression test for [[hooks."before.tool"]] quoted-dot event
  names; strengthen command path assertion to exact absolute path comparison

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

---------

Co-authored-by: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-04-28 18:28:53 -04:00
Tom Boucher
b44482cf03 fix(#2760): defensive Codex install — strip legacy agents blocks, default hooks to AoT, validate post-write schema (#2785)
* fix(#2760): defensive Codex install — strip legacy agents blocks, default hooks to AoT, validate post-write schema

Three defects, three defensive fixes shipped together. Issue reporter
never returned with the requested diagnostic backup, but four additional
users have since confirmed the same Codex breakage and ZakAnun confirmed
manual cleanup is the only working workaround — defensive triple ships
without the original backup grep, justified by the corroborating reports.

Fix 1 (defect 3 — confirmed real). The Codex hooks emit path always
appended a top-level `[[hooks]]` AoT block, which collides with users
who already use the namespaced AoT form `[[hooks.SessionStart]]`. New
helper `hasUserNamespacedAotHooks()` detects the user's preferred shape
on parse and the install emits the GSD-managed hook in that same shape
when present. Default for fresh configs stays at top-level `[[hooks]]`
so status-quo behavior is preserved.

Fix 2 (defects 1+2 — defensive). `stripLeakedGsdCodexSections()` (the
install-time stripper) now always purges bare `[agents]` single-bracket
tables and `[[agents]]` sequence tables regardless of GSD marker
presence — both forms are invalid in current Codex schema and produce
"invalid type: ..., expected struct AgentsToml". Previously gated on
GSD-name lookup which missed marker-stripped configs and third-party
authored entries. The uninstall-time stripper (`stripCodexGsdAgentSections`)
keeps its old conservative behavior so user-authored entries survive
uninstall.

Fix 3 (defensive). Post-write schema validation parses the bytes about
to be committed and asserts no bare `[agents]`, no `[[agents]]`, and no
bare `[hooks.<Event>]` tables remain. On failure the install restores
the pre-install backup of config.toml and aborts loudly so the user is
never left with a Codex CLI that refuses to load. Pre-install snapshot
is captured before installCodexConfig runs (not after) so restore
returns the file to its true pre-GSD state.

Tests added (10 new, 1 updated):
  - bug-2760-codex-install-defensive.test.cjs (10 new tests across 4
    describes: hooks AoT preservation, strip robustness for both
    [agents] and [[agents]] without marker, schema validator behavior,
    abort+restore via test seam)
  - codex-config.test.cjs "case 2 ..." updated to reflect new defensive
    bare-[agents] purge

Full suite: 5747 pass / 0 fail.

Closes #2760

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix(#2760): normalize Codex hooks emit field name across migration and managed paths

The migrateCodexHooksMapFormat path emitted `type = "<TYPE>"` for legacy
[hooks.TYPE] sections, while the GSD-managed Codex install emitted
`event = "SessionStart"` — same target [[hooks]] schema, two different
field names. Codex currently tolerates both via permissive parsing, but
the moment one path tightens this becomes a silent #2760-class regression.

Normalize both call sites on `event` (the existing GSD-managed
convention). Update migration emit, docstring, and existing migration
assertions to match. Add a parity regression test that drives both code
paths and asserts the [[hooks]] field key is identical.

* test(#2153): fix test isolation by building hooks/dist on demand

The "Codex install copies hook file (#2153)" regression depends on
hooks/dist/ being populated, but that directory is gitignored and only
built by `npm run build:hooks`. The npm pretest chain runs `build:sdk`
but not `build:hooks`, so when this file is run in isolation
(`node --test tests/codex-config.test.cjs`) the hook copy step skips
silently and the regression test fails on a stale-environment artifact
rather than a real bug.

Add a top-level before() hook that runs scripts/build-hooks.js when
hooks/dist/ is missing or empty. Matches the pattern already used by
bug-1834-sh-hooks-installed and other install integration tests, so the
suite passes regardless of runner ordering or which tests are targeted.

* fix(#2760): structural TOML validation, atomic writes, and behavioral test rewrites

Addresses CodeRabbit review on PR #2785 plus source-grep violations the
maintainer flagged in the regression test.

Fix 1 (CR 3149606220) — validateCodexConfigSchema now parses the TOML into
a structured object first via the new parseTomlToObject helper, then
runs schema-shape checks against both the parsed structure and the table
section headers. Malformed TOML with valid-looking headers no longer
slips past validation.

Fix 2 (CR 3149606224) — Replaced the four source-grep assertions in
tests/bug-2760-codex-install-defensive.test.cjs (lines 109, 125, 169,
201) with structural assertions against the parsed TOML object via the
exported parseTomlToObject helper. Tests now verify behavior (the file
parses and contains the expected structure) instead of literal byte
patterns. Robust to formatting changes — exactly what the regex-loosening
suggestion was reaching for, done correctly. Confirmed clean by
`npm run lint:tests` (0 violations).

Fix 3 (CR 3149606234) — The describe block that mutates
installModule.__codexSchemaValidator now runs with concurrency: false
so the test seam mutation cannot leak into sibling suites that also
call runCodexInstall.

Fix 4 (CR outside-diff) — Approach (b): atomic temp-file + renameSync.
Added atomicWriteFileSync helper used by mergeCodexConfig and the final
hooks-write. A mid-write failure leaves the .tmp-<pid>-<n> sibling
behind (cleaned up immediately) and never truncates the original
config.toml. Paired with try/catch wrapping around the entire
post-snapshot mutation sequence so any unexpected throw also triggers
restoreCodexSnapshot. Two layers of defense: atomic write prevents the
corruption window, snapshot restore handles non-atomic write paths.

Added behavioral test for fix 4: stubs fs.renameSync to throw on the
configPath rename, asserts the on-disk bytes match the pre-install
snapshot byte-for-byte, asserts the parsed structure is still the
user's [model] section (no half-written GSD agents block), and asserts
no stray .tmp-* files remain. Marked concurrency: false because it
monkey-patches a global.

Test results: 5749/5749 pass, 0 fail. lint:tests clean.

* test(#2760): TOML-parse based assertions for bare-agents purge and hook-field parity (CodeRabbit follow-up)

* fix(#2760): treat write failures as fatal, strip legacy hooks before guard, tighten TOML parser (CR4)

CR4 finding 1 (MAJOR) — Write failures silently succeeded. The inner catch
around atomicWriteFileSync restored the snapshot then re-threw, but the outer
catch only matched 'post-write Codex schema validation failed' and downgraded
everything else to a warn-and-continue. Install finished with "Done!" while
Codex had no GSD agents configured. Fix: wrap writeErr with a `post-write
Codex install failed:` prefix and broaden the outer guard to `.startsWith(
'post-write')` so both schema-validation and write failures abort install.

CR4 finding 2 (MAJOR) — Legacy flat [[hooks]] block prevented namespaced AoT
upgrade. The `!configContent.includes('gsd-check-update')` guard short-
circuited the new namespaced emit when an existing install had the legacy
flat [[hooks]] block, leaving users stuck in the mixed layout this fix is
designed to eliminate. Fix: strip ALL existing managed gsd-check-update
hook blocks (top-level [[hooks]] AND namespaced [[hooks.SessionStart]])
BEFORE evaluating the includes guard, so every install converges on the
right shape regardless of prior state.

CR4 finding 3 (MAJOR) — Homegrown TOML parser silently accepted malformed
input. parseTomlValue happily consumed the `0` prefix of `timeout = 0.5`
and parseTomlToObject did not verify the full RHS was consumed, so
`key = "x" junk` and date/time literals slipped through. Per CONTRIBUTING
("No external dependencies in core"), option (b) was chosen over adding
@iarna/toml: (a) parseTomlValue rejects any integer immediately followed
by `.`, `e`, `E`, `:`, `-`, `T`, or `Z` (floats / dates / times); (b)
parseTomlToObject scans from parsed.end to the next newline and throws
`trailing bytes after value` if anything other than whitespace + optional
`# comment` is present.

* test(#2760): add CR4 regression tests + scope GSD_TEST_MODE + rename rename-fault test

CR4 finding 5 (NIT) — GSD_TEST_MODE leak. Saved previous value, set '1' for
the require, then restored (delete if undefined). No more test-only env var
leaking to siblings in the same node process.

CR4 finding 4 (NIT) — Renamed the existing fix-4 test from 'fs.writeFileSync'
to 'fs.renameSync' (the only call actually faulted) and added a sibling test
that stubs fs.writeFileSync to throw on the .tmp- target — exercising the
pre-rename branch of atomicWriteFileSync that was previously untested. Both
serialize via concurrency: false on the existing describe block.

CR4 finding 1 (MAJOR test) — New behavioral test asserts install throws with
a `post-write Codex install failed` message AND never prints "Done!" when
the hook-block atomic rename fails. Captures stdout via console.log stub,
asserts byte equality of restored snapshot. Faults only the rename whose
temp source contains gsd-check-update so earlier mergeCodexConfig writes
are not collateral damage.

CR4 finding 2 (MAJOR test) — New TOML-parsed behavioral test for the
legacy-hook upgrade path: pre-install has [[hooks.SessionStart]] (user) +
legacy flat [[hooks]] managed gsd-check-update entry; post-install must
have hooks.SessionStart as Array-of-tables with both user hook and GSD
entry, and no top-level [[hooks]] AoT remaining. Also asserts exactly one
gsd-check-update entry (no duplicates).

CR4 finding 3 (MAJOR test) — parseTomlToObject regression suite: rejects
floats (timeout = 0.5), dates (created = 1979-05-27), trailing garbage
(key = "x" junk), and accepts trailing whitespace + # comment.

* fix(#2760): CR5 — pre-write fatal, TOML duplicate-key/header rejection, namespaced AoT migration

Address all five CodeRabbit round-5 findings on PR #2785:

Finding 1 (MAJOR) — Pre-write failures in the Codex hook configuration
catch (around bin/install.js:7002) used to fall through to console.warn
even though restoreCodexSnapshot() had already run. This produced "Done!"
output with no Codex hooks configured. Now wraps the original error with
a "(pre-write)" prefix and rethrows so install aborts loudly. Same defect
class as CR4 finding 1, different layer.

Finding 2 (MAJOR) — parseTomlToObject silently reused existing tables and
overwrote duplicate keys. Real TOML 1.0 rejects:
  - duplicate scalar key in same table ([a]\nx=1\nx=2)
  - re-declared [a] header (two [a] sections)
  - [[arr]] then [arr] for same path (shape mismatch)
Tracks pathShape, declaredHeaders, and per-table-instance key sets;
throws "duplicate or shape-mismatched table header at <path>" or
"duplicate key <name> in <path>".

Finding 3 (MAJOR) — migrateCodexHooksMapFormat used to emit flat
[[hooks]]\nevent="<TYPE>", which produced mixed flat+namespaced layouts
when the user already had [[hooks.<OTHER>]] entries. Now emits
[[hooks.<TYPE>]] directly (the namespace IS the event); managed-emit
detector hasUserNamespacedAotHooks fires correctly so the install
converges on a single namespaced layout regardless of pre-existing state.

Finding 4 (NIT) — tests/bug-2760-codex-install-defensive.test.cjs
rename-failure test tightened from "throw OR warn acceptable" to
assert.equal(threw, true), locking the contract Finding 1 establishes.

Finding 5 (NIT) — bug-2760 test suite snapshots and restores fs.renameSync
defensively in beforeEach/afterEach (symmetric with fs.writeFileSync),
removing the fragile per-test try/finally. Second test in the same
suite cleaned up to drop its try/finally.

Updates tests/codex-config.test.cjs to assert the new namespaced AoT
migration shape via parseTomlToObject (no source-grep). Existing field-
parity test reframed as shape-parity since both paths now emit
namespaced.

Tests: 5764 pass (+8 new). lint:tests: 0 violations.

* docs(#2760): add CHANGELOG entry for Codex install defensive triple

Adds the [Unreleased] Fixed entry for the Codex install fix landed in this
PR — defensive strip of legacy [agents]/[[agents]] blocks, namespaced AoT
hook detection across all events, atomic write + rollback, strict TOML
validation rejecting duplicate keys/repeated headers/trailing bytes.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-04-27 17:11:59 -04:00
Tom Boucher
d5cd64dde5 fix(#2637): migrate legacy Codex [hooks] map format to [[hooks]] array on install (#2747)
Codex 0.124.0 changed the required config.toml hooks format from the old
map-style ([hooks.shell]) to array-of-tables ([[hooks]]). Old GSD installs
that wrote the legacy format now cause a startup parse error on upgrade.

Add migrateCodexHooksMapFormat() which detects non-array [hooks] and
[hooks.TYPE] sections and rewrites them to [[hooks]] entries with an
injected type = "TYPE" key. The migration runs at the start of every Codex
install so affected configs self-heal on the next `gsd install --codex`.

Co-authored-by: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-04-26 13:33:43 -04:00
Tom Boucher
8f7f43abaa test(installer): add failing test for [agents.<name>] struct format (Codex 0.124.0+)
Adds test asserting generateCodexConfigBlock emits [agents.<name>] struct
format, not [[agents]] sequence format. Confirms RED phase for #2727 fix.
2026-04-26 10:35:23 -04:00
Tom Boucher
7ed05c8811 fix(#2645): emit [[agents]] array-of-tables in Codex config.toml (#2664)
* fix(#2645): emit [[agents]] array-of-tables in Codex config.toml

Codex ≥0.116 rejects `[agents.<name>]` map tables with `invalid type:
map, expected a sequence`. Switch generateCodexConfigBlock to emit
`[[agents]]` array-of-tables with an explicit `name` field per entry.

Strip + merge paths now self-heal on reinstall — both the legacy
`[agents.gsd-*]` map shape (pre-#2645 configs) and the new
`[[agents]]` with `name = "gsd-*"` shape are recognized and replaced,
while user-authored `[[agents]]` entries are preserved.

Fixes #2645

* fix(#2645): use TOML-aware parser to strip managed [[agents]] sections

CodeRabbit flagged that the prior regex-based stripper for [[agents]]
array-of-tables only matched headers at column 0 and stopped at any line
beginning with `[`. An indented [[agents]] header would not terminate the
preceding match, so a managed `gsd-*` block could absorb a following
user-authored agent and silently delete it.

Replace the ad-hoc regex with the existing TOML-aware section parser
(getTomlTableSections + removeContentRanges) so section boundaries are
authoritative regardless of indentation. Same logic applies to legacy
[agents.gsd-*] map sections.

Add a comprehensive mixed-shape test covering multiple GSD entries (both
legacy map and new array-of-tables, double- and single-quoted names)
interleaved with multiple user-authored agents in both shapes — verifies
all GSD entries are stripped and every user entry is preserved.
2026-04-24 18:09:01 -04:00
Tom Boucher
0da696eb6c fix(install): replace all ~/.claude/ paths in Codex .toml files (#2320) (#2325)
* fix(install): replace all ~/.claude/ paths in generated Codex .toml files (#2320)

installCodexConfig() only rewrote get-shit-done/-scoped paths; all other
~/.claude/ references (hooks, skills, configDir) leaked into generated .toml
files unchanged. Add three additional regex replacements to catch $HOME/.claude/,
~/.claude/, and ./.claude/ patterns and rewrite them to .codex equivalents.

Adds regression test PATHS-01.

Closes #2320

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* fix(install): handle bare .claude end-of-string and scan all .toml files (CR feedback)

- Use capture group (\/|$) so replacements handle both ~/.claude/ and bare
  ~/.claude at end of string, not just the trailing-slash form
- Expand PATHS-01 test to scan agents/*.toml + top-level config.toml
- Broaden leak pattern to match ./.claude, ~, and $HOME variants with or
  without trailing slash

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

---------

Co-authored-by: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-04-16 17:13:44 -04:00
Tom Boucher
262b395879 fix: embed model_overrides in Codex TOML and OpenCode agent files (#2279)
* docs: sync ARCHITECTURE.md command count to 74

commands/gsd/ has 74 .md files; the two count references in
ARCHITECTURE.md still said 73. Fixes the command-count-sync
regression test.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* fix: embed model_overrides in Codex TOML and OpenCode agent files (#2256)

Codex and OpenCode use static agent files (TOML / markdown frontmatter)
rather than inline Task(model=...) parameters, so model_overrides set in
~/.gsd/defaults.json was silently ignored — all subagents fell through to
the runtime's default model.

Fix: at install time, read model_overrides from ~/.gsd/defaults.json and
embed the matching model ID into each agent file:
  - Codex: model = "..." field in the agent TOML (generateCodexAgentToml)
  - OpenCode: model: ... field in agent frontmatter (convertClaudeToOpencodeFrontmatter)

Also adds readGsdGlobalModelOverrides() helper and passes the result
through installCodexConfig() and the OpenCode agent install loop.

Closes #2256

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* feat(commands): add gsd:inbox command for GitHub issue/PR triage

inbox.md was created but not committed, causing the command count
to read 73 in git while ARCHITECTURE.md correctly stated 74.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

---------

Co-authored-by: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-04-15 14:59:56 -04:00
Tom Boucher
b896db6f91 fix: copy hook files to Codex install target (#2153) (#2166)
Codex install registered gsd-check-update.js in config.toml but never
copied the hook file to ~/.codex/hooks/. The hook-copy block in install()
was gated by !isCodex, leaving a broken reference on every fresh Codex
global install.

Adds a dedicated hook-copy step inside the isCodex branch that mirrors
the existing copy logic (template substitution, chmod). Adds a regression
test that verifies the hook file physically exists after install.

Closes #2153

Co-authored-by: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-04-12 15:52:57 -04:00
Lakshman Turlapati
d0ab1d8aaa fix(codex): convert /gsd- workflow commands to $gsd- during installation (#1994)
The convertSlashCommandsToCodexSkillMentions function only converted
colon-style skill invocations (/gsd:command) but not hyphen-style
command references (/gsd-command) used in workflow output templates
(Next Up blocks, phase completion messages, etc.). This caused Codex
users to see /gsd- prefixed commands instead of $gsd- in chat output.

- Add regex to convert /gsd-command → $gsd-command with negative
  lookbehind to exclude file paths (e.g. bin/gsd-tools.cjs)
- Strip /clear references in Codex output (no Codex equivalent)
- Add 5 regression tests covering command conversion, path
  preservation, and /clear removal

Co-authored-by: Lakshman <lakshman@lakshman-GG9LQ90J61.local>
Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-10 10:49:58 -04:00
Jeremy McSpadden
84de0cc760 fix(install): comprehensive audit cleanup of hook copy, uninstall, and manifest (#1755) (#1768)
- Add chmod +x for .sh hooks during install (fixes #1755 permission denied)
- Fix Codex hook: wrong path (get-shit-done/hooks/) and inverted filename (gsd-update-check.js → gsd-check-update.js)
- Fix cache invalidation path from ~/cache/ to ~/.cache/gsd/
- Track .sh hooks in writeManifest so saveLocalPatches detects modifications
- Add gsd-workflow-guard.js to uninstall file cleanup list
- Add community hooks (session-state, validate-commit, phase-boundary) to uninstall settings.json cleanup
- Remove phantom gsd-check-update.sh from uninstall list
- Remove dead isCursor/isWindsurf branches in uninstall (already handled by combined branch)
- Warn when expected .sh hooks are missing after verifyInstalled
- Add 15 regression tests in install-hooks-copy.test.cjs
- Update codex-config.test.cjs assertions for corrected hook filename

Fixes #1755
2026-04-05 11:37:27 -04:00
Tom Boucher
2703422be8 refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)
* refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md

- Replace require('node:assert') with require('node:assert/strict') across
  all 73 test files to enforce strict equality (no type coercion)
- Replace try/finally cleanup blocks with t.after() hooks in core.test.cjs
  and hooks-opt-in.test.cjs per the test lifecycle standards
- Utility functions in codex-config and security-scan retain try/finally
  as that is appropriate for per-function resource guards, not lifecycle hooks

Closes #1674

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* perf(tests): add --test-concurrency=4 to test runner for parallel file execution

Node.js --test-concurrency controls how many test files run as parallel child
processes. Set to 4 by default, configurable via TEST_CONCURRENCY env var.
Fixes tests at a known level rather than inheriting os.availableParallelism()
which varies across CI environments.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* fix(security): allowlist verify.test.cjs in prompt-injection scanner

tests/verify.test.cjs uses <human>...</human> as GSD phase task-type
XML (meaning "a human should verify this step"), which matches the
scanner's fake-message-boundary pattern for LLM APIs. This is a
false positive — add it to the allowlist alongside the other test files
that legitimately contain injection-adjacent patterns.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

---------

Co-authored-by: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-04-04 14:29:03 -04:00
Tibsfox
2b8c95a05c fix(install): add .claude path replacement for Codex runtime
convertClaudeToCodexMarkdown() was missing path replacement — unlike
Copilot/Gemini/Antigravity converters which all replace $HOME/.claude/
paths. This left hardcoded .claude references in Codex agent files,
causing ENOENT when gsd-tools.cjs tried to load from ~/.claude/ on
Codex installations.

Closes #1430

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-03-27 17:41:03 -07:00
Tom Boucher
f4d8858188 fix: repair trapped non-boolean keys under [features] on Codex re-install
Pre-#1346 GSD installs prepended [features] before bare top-level keys
in ~/.codex/config.toml, trapping keys like model="gpt-5.3-codex" under
[features] where Codex expects only booleans. The #1346 fix prevented
NEW corruption but did not repair EXISTING corrupted configs. Re-installing
GSD left the trapped keys in place, causing "invalid type: string, expected
a boolean" on every Codex launch.

repairTrappedFeaturesKeys() now detects non-boolean key-value lines inside
[features] and relocates them before the [features] header during
ensureCodexHooksFeature(), so re-installs heal previously corrupted configs.

Fixes #1379

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-03-25 14:50:02 -04:00
CI
9f8d11d603 fix: preserve top-level config keys and use absolute agent paths for Codex ≥0.116
Two fixes for Codex config.toml compatibility:

1. ensureCodexHooksFeature: insert [features] before the first table header
   instead of prepending it before all content. Prepending traps bare
   top-level keys (model, model_reasoning_effort) under [features], where
   Codex rejects them with "invalid type: string, expected a boolean".

2. generateCodexConfigBlock: use absolute config_file paths when targetDir
   is provided. Codex ≥0.116 requires AbsolutePathBuf and cannot resolve
   relative "agents/..." paths, failing with "AbsolutePathBuf deserialized
   without a base path".

Fixes #1202

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-03-24 10:11:31 +08:00
Disaster-Terminator
b6a49163ea fix(codex-config): preserve EOL when enabling codex hooks 2026-03-20 13:24:19 +08:00
Tom Boucher
52f6c71bdf Merge pull request #1144 from ChaptersOfFloatingLife/fix/codex-agent-toml-metadata
fix(codex): include required agent metadata in TOML
2026-03-19 12:12:08 -04:00
Tom Boucher
1f2e17923a Merge pull request #1142 from medhatgalal/AI/fix-codex-markerless-gsd-merge
Fix duplicate Codex GSD agent blocks without marker
2026-03-19 12:11:48 -04:00
Tom Boucher
862f6b91ba fix: prevent Codex config.toml corruption from non-boolean [features] keys (#1202)
When GSD installs codex_hooks = true under [features], any non-boolean
keys already in that section (e.g. model = "gpt-5.4") cause Codex's
TOML parser to fail with 'invalid type: string, expected a boolean'.

Root cause: TOML sections extend until the next [section] header. If
the user placed model/model_reasoning_effort under [features] (common
since Codex's own config format encourages this), GSD's installer
didn't detect or correct the structural issue.

Fix: After injecting codex_hooks, scan the [features] section for
non-boolean values and move them above [features] to the top level.
This preserves the user's keys while keeping [features] clean for
Codex's strict boolean parser.

Includes 2 regression tests:
- Detects non-boolean keys under [features] (model, model_reasoning_effort)
- Confirms boolean keys (codex_hooks, multi_agent) are not flagged

Closes #1202
2026-03-18 23:32:05 -04:00
CI
5a7d56e6c5 fix(codex): include required agent metadata in TOML 2026-03-17 20:24:35 +08:00
Medhat Galal
10294128c9 Fix duplicate Codex GSD agent blocks without marker 2026-03-17 08:10:59 -04:00
TÂCHES
b4781449f8 fix: remove deprecated Codex config keys causing UI instability (#1051)
* fix: remove deprecated Codex config keys causing UI instability (closes #1037)

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: update codex config tests to match simplified config structure

Tests asserted the old config structure ([features] section, multi_agent,
default_mode_request_user_input, [agents] table with max_threads/max_depth)
that was deliberately removed. Tests now verify the new behavior: config
block contains only the GSD marker and per-agent [agents.gsd-*] sections.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-03-14 21:30:09 -06:00
Artspark
bc3d6db1c0 fix: emit valid codex agent TOML (#1008) 2026-03-12 11:36:04 -06:00
Tibsfox
8b8d1074b8 fix(milestone): deduplicate phase filter and handle empty MILESTONES.md
Two hardening changes to cmdMilestoneComplete:

1. Replace 27 lines of inline isDirInMilestone logic (roadmap parsing,
   normalization, and matching) with a single call to the shared
   getMilestonePhaseFilter(cwd) from core.cjs. The inline copy was
   identical to the core version — deduplicating prevents future drift.

2. Handle empty MILESTONES.md files. Previously, an existing but empty
   file would fall into the headerMatch branch and produce malformed
   output. Now an empty file is treated the same as a missing one,
   writing the standard "# Milestones" header before the entry.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-03-03 08:01:54 -06:00
Lex Christopherson
1455931f79 feat(codex): add request_user_input mapping, multi-agent config, and agent role generation
Expand Codex adapter with AskUserQuestion → request_user_input parameter
mapping (including multiSelect workaround and Execute mode fallback) and
Task() → spawn_agent mapping (parallel fan-out, result parsing).

Add convertClaudeAgentToCodexAgent() that generates <codex_agent_role>
headers with role/tools/purpose and cleans agent frontmatter.

Generate config.toml with [features] (multi_agent, request_user_input)
and [agents.gsd-*] role sections pointing to per-agent .toml configs
with sandbox_mode (workspace-write/read-only) and developer_instructions.

Config merge handles 3 cases: new file, existing with GSD marker
(truncate + re-append), existing without marker (inject features +
append agents). Uninstall strips all GSD content including injected
feature keys while preserving user settings.

Closes #779

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-27 15:29:35 -06:00