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14 Commits

Author SHA1 Message Date
Tom Boucher
4e8927b0b9 fix(#3707): degrade the fold for every UAT gap class, and stop line endings hiding rows from the audit and the acceptance gate (#3903)
* test(#3707): failing-first coverage for reverting the fence-shortfall fold shield

Pins the post-revert contract: a phase whose only gap is a fence shortfall must
degrade the fold and withhold the milestone percentages, like every other gap class.

Five of the eight rows are CONTROLS that pass before the change, and they carry more
weight than the failing row. The failure mode of this revert is degrading TOO MUCH:
a revert that sets foldScope outside the headingsSeen > 0 branch would withhold every
percentage in the project, and only the no-gap control catches that. Another control
catches a revert that collapses the two scopes into one and loses the distinction
between what a phase reports and what the fold folds -- uat.scope must stay TRUNCATED
for every gap either way, which it already is.

The row that pinned the shielded behavior is rewritten rather than deleted. Deleting
a test because the behavior it asserts is being reversed leaves the reversal
unguarded.

* fix(#3707): degrade the fold for every UAT gap class, reverting the fence-shortfall shield

Maintainer decision. The two orthogonal engines split on this during #3707 and
neither filed it as blocking, so it shipped in the shape the engine that raised the
objection endorsed after verifying seven fixtures. The call has now gone the other
way, restoring the fail-safe direction chosen twice already on this issue.

The shield exempted one gap class from the fold's teeth. It could not do that
safely: shortfallBlocks is a single tally incremented at exactly one site and spans
BOTH a harmless fenced documentation sample AND a genuinely fence-straddled
result: blocked row. Exempting it therefore could not exempt only the harmless case
-- it also published a milestone percentage over a real, unread outstanding row.
SCOPE.TRUNCATED means the scan could not SEE part of the evidence, which is exactly
that case.

scope and foldScope now agree: every gap class degrades both. The accepted
over-report documented in uat.cts is unchanged and still documented there; what
changed is only that it no longer buys an exemption from the fold.

The comment block above it argued FOR the shield and is rewritten, because a
comment defending behavior the code no longer has is worse than no comment.
shortfallBlocks leaves this function's destructure but is untouched upstream, where
audit-uat still consumes it.

* fix(#3707): correct the caller comment, add the changeset, and name what the order tests guard

Review found a SECOND comment still documenting the removed shield -- the caller's,
beside the worstScope fold, stating that foldScope differs from scope for exactly
one case which must not raise phase_scope_degraded or withhold the milestone's
percentages. That is now the opposite of what the code does. I rewrote the
buildUatRows comment in the previous commit and asserted in its message that a
comment defending behavior the code no longer has is worse than no comment, then
left exactly that one standing a few hundred lines away.

The change had no changeset. It is user-visible: a milestone's percentage goes from
published to withheld whenever any phase has a fence-shortfall-only gap. PR gates
hard-fail a user-facing code diff without one.

The two scopes are now identical at every return site. They are NOT collapsed --
that would change the return shape and the caller on what is meant to be a
one-condition revert, and the seam is worth keeping if the distinction is ever
wanted again -- but the declaration now says plainly that they agree by decision
rather than by accident, so a reader does not have to re-derive it.

The two order-independence tests were renamed. foldScope is monotonic with no reset
path, so file order is structurally irrelevant and those rows could never have
failed for the ordering reason their names promised. They do guard something real --
a multi-file phase degrading when any one file has a shortfall-only gap -- so they
now say that instead.

* test(#3707): failing-first coverage for the lone-CR UAT false-clean

The parser splits on newline only, and the heading tokenizer agrees with it, so a
lone carriage return is not a line boundary anywhere in it. CommonMark treats a lone
CR as a line ending, so such a row renders to a human reader while being invisible
to BOTH sides of the parser's symmetry invariant: no item, no shortfall, no
headingsSeen. A phase hiding a result: blocked row this way reports 100 percent with
zero diagnostics.

Found by the security review of the fold-shield revert. It is the one false-clean
class that revert does not reach, and it is the same bug class this issue exists to
fix -- an unreadable row reported as clean.

Nine rows. The LF control is what proves this is a separator defect rather than a
content defect: identical bodies, one separator apart, and only one of them hides
the row. CRLF and CR-inside-a-fence controls guard the coming normalization against
double-counting or tearing content that legitimately contains a carriage return.
Two further manifestations turned up while writing them: a leading CR breaks
column-0 anchoring of the first heading, and an all-CR document flags a shortfall it
cannot attribute to any row.

* fix(#3707): treat a lone carriage return as a line ending in the UAT parser

A lone CR was not a line boundary anywhere in the parser -- it split on newline
only, and the heading tokenizer agreed with it. CommonMark treats a lone CR as a
line ending, so such a row rendered to a human reader while being invisible to BOTH
sides of the parser's symmetry invariant: no item, no shortfall, no headingsSeen. A
phase hiding a result: blocked row that way reported 100 percent with zero
diagnostics.

Line endings are now normalized once at document ingress -- CRLF and lone CR both to
newline -- at the two independent entry points, rather than teaching each split site
about CR. Every downstream scan, offset and span therefore reads one convention.
That single-frame property is deliberate: this issue already cost a HIGH when two
scans read the same document through different frames.

MY OWN END-TO-END TEST WAS WRONG and is replaced rather than weakened. It asserted
that a lone-CR document must withhold its percentage, which reasons from the
pre-fix symptom: after the fix the row is not hidden, it is surfaced, and this
module deliberately keeps visible outstanding UAT work separate from completion
percentages -- only unreadable evidence degrades scope. The success of the fix is
what made the assertion false. The implementing agent refused to satisfy both it and
the architecture and asked instead of bending either; it was right.

What replaces it is a stronger contract: a lone-CR document and its LF twin, built
from one source, must produce identical audit output -- scope, percent, every
unresolved row by identity, and the diagnostic set. That is what 'a line-ending
convention must not change what the audit reports' actually means, and it carries a
non-vacuity check so it cannot pass with both sides empty.

shortfallBlocks keeps being returned, now documented as currently unconsumed. An
earlier reviewer told me audit-uat still consumed it and I passed that on as an
instruction; it was wrong, and it was caught by checking rather than by me.

* fix(#3707): normalize at the document read boundary, not at two call sites

The lone-CR fix was half-applied and both review engines caught it independently.
cmdAuditUat has four document ingresses, not the two I normalized: VERIFICATION.md
and deferred-items.md still handed raw text to newline-only splitters, and the
frontmatter extract in the UAT loop read raw content while its parser read
normalized -- one audit entry mixing the two frames the fix exists to unify.
Measured: a phase written twice from one source gave total_files 2 / total_items 4
under LF and results [] / total_items 0 under lone CR, with zero diagnostics.

Normalizing two call sites and declaring it done is exactly why two were missed, so
this moves it to the read boundary: every document now enters through a helper that
normalizes, in audit-uat, in planning-inspect's readDocument, and in the shared
verification-status read. Future parsers downstream get normalized text by
construction rather than because someone remembered.

That last seam also fixes an under-reporting case of the same root: a lone-CR
VERIFICATION.md saying status: passed was read as missing, telling the user a verify
step that had completed never ran.

The parity test's load-bearing assertion is now marked as such. Four of its five
equality checks still pass with the bug present -- only the unresolved-row identity
differs -- so trimming that one as redundant would make the row vacuous.

Second changeset added: the CR fix is user-visible independently of the fold revert,
and one fragment covering both would have described neither.

* test(#3707): failing-first coverage for the U+2028 and duplicate-result false-cleans

Two more of the same class, both found by the security review of this branch and
both reproduced before writing a line.

normalizeLineEndings folds only carriage returns, but a JS /m anchor also treats
U+2028 and U+2029 as line terminators while split on newline does not. That is the
identical asymmetry the carriage-return bug exploited, one separator over, and worse
in one respect: these are not CommonMark line endings, so a reader still sees the
column-0 result: blocked that the tool discards. Measured: a scalar-internal
result: pass placed after U+2028 wins over the real blocked line and the row
disappears with no gap raised.

Separately, and independent of any separator, a block with two column-0 result:
lines resolves to the first with no ambiguity signalled. Prepending result: pass to
a block therefore deletes an outstanding row silently; reversing the order surfaces
it. Order deciding meaning is the defect, so the pair of rows pins the contract as
ambiguity-is-a-gap rather than last-one-wins, leaving the fix room to implement the
gap sensibly.

Four controls: an ordinary marker in the same position (proving separator not
content), legitimate U+2028 inside prose that must not be torn, a single result line,
and a result line inside a fence that must not count as a second occurrence.

* fix(#3707): scan result lines by split, not by a multiline anchor

Two more false-cleans from the security review, both closed by the same change.

A JS /m anchor treats U+2028 and U+2029 as line terminators while split on newline
does not. A scalar-internal result: pass placed after one of those separators
therefore matched as a line start and beat the real column-0 result: blocked, and
the row vanished at 100 percent with no gap. Worse than the carriage-return case in
one respect: these are not CommonMark line endings, so a reader still saw the
blocked row the tool discarded.

Separately, the non-global match returned the leftmost hit, so a block with two
column-0 result: lines silently resolved to the first. Prepending result: pass
deleted an outstanding row; reversing the order surfaced it. Order deciding meaning
was the defect.

Both close by scanning lines produced by split rather than by anchoring a regex
inside the whole document: each line is tested on its own, and a count other than
exactly one is reported as a parse gap instead of resolved to either candidate.

I asked for U+2028 to be folded in normalizeLineEndings and that was wrong. Folding
is length-preserving, so it would have made the U+2028 fixture byte-identical to the
genuine two-result-line fixture -- while one requires a confident item and the other
requires an ambiguity gap. No implementation can satisfy both once the distinguishing
character is erased. The agent proved that and deviated rather than forcing it, which
is why normalizeLineEndings still folds only carriage returns, now with a comment
saying why.

* fix(#3707): bound the ambiguity scan at the next heading-shaped line

The split-based result scan regressed four pre-existing #3078/#3707 guards, each
off by exactly one gap.

My diagnosis was wrong. I read the off-by-one as double counting -- zero-result
blocks taking both the new path and the pre-existing one -- and said to change the
ambiguity condition from not-equal-one to greater-than-one. The agent checked and
refused: the zero path was never duplicated. The real cause is double ATTRIBUTION.
A block is sliced to the next TOKENIZED heading, so when the next row is untokenized
-- hidden by a straddling fence, or indented and already counted by the shortfall
scan -- that row's own result: line is absorbed into the previous block. The scan
then saw two result lines across what are really two rows and raised a second,
redundant gap on top of the one already counted elsewhere.

Had the greater-than-one change gone in, the counts would have matched while the
double attribution stayed. That is the compensating-adjustment failure I had asked
it to refuse, and it did.

The scan is now bounded at the first following heading-shaped line, either indent
class, so a genuine same-block ambiguity is untouched while spillover from a row
counted elsewhere is excluded.

* fix(#3707): keep the U+2028 immunity, revert the ambiguity detection

The ambiguity half of this change regressed the suite twice and is coming out.

Attempt one double-attributed: a block is sliced to the next TOKENIZED heading, so
when the real next row is untokenized its result: line was absorbed into the
previous block and raised a second gap on a row already counted elsewhere. Four
guards broke.

Attempt two bounded the scan at the next heading-shaped line and broke thirty. An
indented ### N. inside a block scalar is legitimate scalar CONTENT, not a heading,
and truncating there defeats every #3078 guard that exists to stop scalar bodies
being read as rows. Telling a genuinely hidden indented row apart from indented
scalar text is a classification countUnattributedIndentedRows already owns; a raw
regex does not have that information.

What survives is the half that is sound and was never implicated in either
regression: the result scan tests each line produced by split rather than anchoring
a regex with the multiline flag over the whole block. split never treats U+2028 or
U+2029 as a delimiter, so those separators can no longer manufacture a line start
and steal a row. Everything else returns to first-match-wins, byte-identical to
origin/next.

The two tests pinning ambiguity-as-a-gap are removed with it, since the contract is
no longer implemented here. The defect they described is real, pre-existing and
independent of any separator -- result: pass before result: blocked silently deletes
an outstanding row -- and it needs its own change with a scalar-aware counter rather
than being wedged into a branch already carrying three fixes.

* fix(#3707): correct the shared-seam rationale and restore U+2028 trailing text

The revert left a stale rationale in core-utils, justifying the decision not to fold
U+2028 by claiming uat.cts must tell a fake line start apart from a real second
column-0 result: declaration that gets flagged as ambiguous. Nothing flags ambiguity
any more; that behavior was reverted and the same file says so a few lines away. The
decision is still right, the stated reason was false.

This is the third stale comment this branch has shipped and had to fix, and the worst
placed of them: core-utils is a shared leaf that every future document consumer will
read for guidance. Rewritten to the true reason -- the scan tests each split line
individually rather than anchoring over the block, so an exotic separator cannot
manufacture a line start and folding is unnecessary.

Also a real behavior delta I had not noticed. Dropping the multiline flag left the
pattern's trailing .*$ in place, and dot never matches U+2028, so a genuine column-0
result: blocked whose TRAILING text contained one stopped parsing entirely -- a
visible parse gap rather than a false clean, so fail-safe, but a regression against
origin/next that nothing pinned. The trailing portion now matches any character and
a test pins it by identity against its plain-LF twin.

Plus the JSDoc orphaned when normalizeLineEndings moved to core-utils, and the
changeset, which described neither the separator fix nor planning-inspect surfacing
lone-CR rows.

* fix(#3707): harden the acceptance gate, which had both halves of the same bug

uat-predicate is a SECOND, independent UAT parser, and it is the one that decides
phase uat-passed. It read raw bytes and anchored a multiline regex over unsplit
text -- exactly the two defects this branch closed one module away in uat.cts.

The consequence is worse than the audit surface it mirrors. Measured on identical
bytes: a U+2028 scalar injection made the gate return passed true while planning
inspect reported the same row as blocked and outstanding. The hardened surface and
the gate disagreed, and the gate was the permissive one -- so a phase could be
accepted over a row the audit could see and the gate could not.

Both raw reads now go through the shared normalize seam and both scans test lines
produced by split rather than anchoring over the document. First-match-wins,
matching uat.cts; no ambiguity counting is reintroduced. Tests assert the AGREEMENT
between the two surfaces rather than each separately, because divergence is the
defect.

Also finishes the same root cause one module over: phase complete's advisory
pre-scan read raw bytes, so a lone-CR VERIFICATION.md lost its human_needed or
gaps_found warning -- the fix verification.cts already got on this branch.

And narrows the core-utils rationale I reworded last commit, which claimed consumers
already avoid multiline anchors. uat.cts still has five over unsplit text. That is
the fourth comment on this branch to assert something the code does not do, so it
now states only what is true of core-utils itself.

* fix(#3707): give structure and attribution different line frames, normalize the close audit

Two more from review, and the first was a regression I introduced one commit
earlier.

Converting the gate's heading scan to split-then-match removed a detection
origin/next had: a ### N. heading delimited by U+2028 was found by the old multiline
scan and was not found after. So hardening the result scan quietly weakened the
heading scan, and the gate stopped blocking on rows origin/next blocked -- the
permissive direction, on the surface that decides acceptance.

The insight I had missed is that the two scans need DIFFERENT frames. Heading
detection is structure: there is no distinction to preserve, so it splits on newline
or either exotic separator and finds a heading however it is delimited. The result
scan is attribution: the newline-only frame is exactly what stops a scalar-internal
result: from being read as a column-0 line, so it stays. One frame applied uniformly
was the error.

Second, a THIRD unnormalized parser family: the milestone-close audit read every
artifact raw. A lone-CR VERIFICATION.md degraded to status unknown and was skipped,
and deferred entries vanished outright -- measured as three items requiring
decisions under LF and one under CR, on identical bytes. All nine scanner reads now
normalize; six of them had the identical defect beyond the three review named. The
acknowledge path stays deliberately raw, since it splices by byte offset, and now
says so.

Also pins the cross-newline result: divergence, and replaces three raw U+2028
literals in test source with escapes. A raw separator in a fixture is one formatter
away from becoming an ordinary-character control that still passes -- vacuous in the
only test pinning the separator fix.

* fix(#3707): share one frame between the acknowledge writer and the audit reader

Normalizing the audit scanners left the writer and the reader on different frames.
cmdAuditAcknowledge derives its stored snapshot values from raw content -- correct
for the SPLICE, which rewrites by byte offset -- but scanUatGaps and
scanContextQuestions now recompute those same values from normalized content. For a
lone-CR artifact the two can never match, so an acknowledgement never suppresses its
item and it resurfaces on every audit: acknowledge became a silent no-op.

Fail-safe in direction, since the item stays visible rather than being wrongly
suppressed, but it is the writer and reader disagreeing about what a line is -- the
exact class this branch exists to eliminate, and the fourth instance of it here.

The derive functions now read a normalized copy while the splice keeps raw bytes and
raw offsets, so both sides share one frame and the byte-offset rewrite is untouched.
Round trip pinned for lone-CR and LF, with an existing LF marker asserted still
recognised so the change cannot silently invalidate acknowledgements already in
users' files.

Also tightens an assertion that pinned this branch's own heading fix with a proxy:
notStrictEqual against 'passed' also passes on 'pass', which IS a passing token, so
it could not have caught a regression attributing a passing result to the recovered
heading. It now pins the exact token.

* chore(#3707): backfill changeset pr numbers

Both fragments still carried the pr: 0 placeholder, which failed changeset-lint and
docs-lint on PR 3903. The review had flagged the backfill as pending and I opened
the PR without doing it.

---------

Co-authored-by: sim <sim@local>
2026-08-26 20:17:35 -04:00
Tom Boucher
cf15682d1c enhance(#3028): responsive Markdown separators instead of fixed-width rules (#3789)
* feat(#3028): responsive Markdown separators instead of fixed-width rules

Stage banners, checkpoints, completion and error panels used fixed-width
runs of box-drawing characters -- a 53-column heavy rule and a 62-column
double-line box. Those runs are ordinary text to a Markdown-rendering
host, so in a narrower pane they wrap and the border comes apart from
the heading it framed.

Shipped content now emits an ATX heading for a titled section and a
blank-line-delimited --- for a break between sections, both of which
adapt to the available width. The same convention is applied to the
three code sites that built these strings at runtime: the UAT
checkpoint renderer, the milestone-close audit report, and the TDD
review checkpoint table.

Removing the box also removes its only reason to exist -- the
east-asian-width padding helpers that kept its right border aligned
(checkpointBoxLine, displayWidth, isWideCodePoint, ZERO_WIDTH_MARK_RE,
CHECKPOINT_BOX_WIDTH). RTL directional isolation is unchanged.

The convention is specified in gsd-core/references/ui-brand.md and
enforced across all shipped content by tests/responsive-separators.test.cjs.

Refs #3028

* test(#3028): pin the heading form in checkpoint and audit-report assertions

These suites asserted the exact box borders and the 62-column padded
banner interior. With the box gone they assert the ### heading form,
the --- break and the bolded instruction line, and each now carries a
positive assertion that no box character remains -- which is what pins
the fix rather than merely tolerating it.

Language coverage is converted, not dropped: Japanese, Chinese, Korean,
Hindi and Arabic all still assert their rendered banner, and the Arabic
case still asserts the RTL directional isolates the box removal must
not disturb. Adds a case for a banner longer than the old inner width,
which previously produced a ragged border and now has none.

Refs #3028

* chore(#3028): acknowledge execute-plan.md growth from the checkpoint display spec

The checkpoint_protocol display spec described the drawn box; it now
describes the heading, the --- break and the bolded action prompt,
which costs 22 bytes (40111 -> 40133, 827 under the cap).

Appended to the existing #3370 fragment rather than filed as a new one:
a growth ack keys on the bare filename and #3370 already declares
execute-plan.md, so a second source naming it would be a hard
duplicate-key error. Same supersede-by-append route #3370 took for the
spent #2652 fragment.

Refs #3028

* docs(#3028): state the load-bearing half of the separator rule, and amend the zh-CN reference

Review found three things.

The rule as first written demanded a blank line above AND below every
---. Only the one above is load-bearing: it is what stops CommonMark
reading the rule as a setext underline for the line above. The one below
is cosmetic, because a thematic break is a leaf block. The rule now says
that, with the reason, instead of asserting a stricter form the content
does not keep.

The zh-CN reference had received the mechanical box-to-heading swap but
none of the prose behind it: it still claimed a 62-character checkpoint
width and still listed --- among forbidden mixed banner styles, so it
contradicted the convention it was translating. It now carries the
separator section, the setext reasoning, the unconditional-vs-per-runtime
rationale and a corrected anti-pattern list, in Chinese.

The user guide asserted that a heading is not a degradation anywhere.
That is an assertion, not a demonstration. It now says what was actually
traded away in a plain terminal, points at the recorded rationale, and
invites the report that would justify the capability flag instead.

Refs #3028

* chore(#3028): backfill changeset PR number

Refs #3028

---------

Co-authored-by: sim <sim@local>
2026-08-23 22:38:12 -04:00
Tom Boucher
98ecb2ba8c enhance(#2142): archive quick tasks at milestone close-out (#3592)
* test(#2142): failing-first coverage for quick-task archival at milestone close-out

* enhance(#2142): archive quick tasks at milestone close-out

* fix(#2142): resolve review findings — readme injection, move/reset ordering, owned state write

* fix(#2142): fold archival under milestone namespace, expose index IR, dedupe reset decision

* test(#2142): assert archive-dir-relative summary path in index IR

* docs(#2142): backfill changeset pr number to 3592

* test(#2142): skip newline-fixture injection test on windows (control chars illegal in path names)

---------

Co-authored-by: sim <sim@local>
2026-08-17 14:51:00 -04:00
Tom Boucher
abf3cf7c25 fix(#3458): scan archived milestone phases, and make [A] Acknowledge actually suppress (#3555)
* fix(#3458): scan archived milestone phases in the four audit-open scanners

`query audit-open` resolved exactly one phase root, `.planning/phases/`. When a
milestone closes its phase directories move to
`.planning/milestones/v<X.Y>-phases/`, so an item still unresolved at that
moment — the `[R]/[A]/[C]` prompt accepts "accept" and "carry forward", not only
"resolve" — became invisible to the v1.1 pre-close audit and every audit after
it. The window in which an unresolved item is visible to this gate was exactly
one milestone wide, and nothing announced when it closed.

Reproduced before fixing, with byte-identical artifacts in the two layouts and
the active layout as the control:

  active   → has_open_items=true   deferred=1  uat_gaps=1  total=2
  archived → has_open_items=false  deferred=0  uat_gaps=0  total=0

`scanDeferredItems`' own doc comment names this as the thing it was built to
prevent — "phase directories archive to `milestones/vX.Y-phases/` (#1871) and
the entry leaves the live tree having never been triaged" — while the
implementation eleven lines below cannot read that path. It catches an entry at
its own milestone close and goes blind at precisely the transition the comment
describes.

This is not cosmetic under-reporting. `auditOpenArtifacts` sums all nine
category counts into `counts.total` and returns `has_open_items: counts.total >
0`, so four blind scanners can flip the gate's headline boolean and let
`/gsd-complete-milestone` assert a clean close it never verified. In a
fully-archived project `.planning/phases/` may not exist at all, and the
scanners' `if (!fs.existsSync(phasesDir)) return []` produced a value
indistinguishable from "nothing is open".

## One enumeration, not four

The four scanners each hand-rolled the same active-only walk. They now share
`listAuditPhaseTargets(planDir, cwd)`, which yields both roots — the shape of
fix epic #3473's B2 asks for, and the reason the fix is one seam rather than
four edits.

Three properties are load-bearing:

  * the ACTIVE enumeration is unchanged — still a raw `readdirSync`, NOT
    `listMilestonePhaseDirs`. These scanners are deliberately not
    milestone-filtered today, and switching would silently add window and
    sentinel filtering: a behavior change belonging to #3372, not here.
  * a missing or unreadable active root skips that half instead of returning
    early. That early return WAS the bug in a fully-archived project.
  * archived dirs are deliberately NOT milestone-filtered, per the comment
    `src/uat.cts` already carries: archived phases belong to past milestones by
    definition, so applying the current-milestone filter discards every one and
    silently reinstates this bug.

Each item now carries `archived_milestone` when it comes from a closed
milestone, matching how the sibling module already labels archived results —
without it an operator triaging `[R]/[A]/[C]` cannot tell a live item from one
carried over. Additive: no existing test or doc asserted an exact key set.

`scripts/lint-phase-enumeration-drift.cjs`'s exemption list for this file drops
from the four scanner names to the single helper, since that is now the only
place the enumeration lives.

## Tests

Written failing-first and confirmed red for the right reason before the fix, all
four driven through the real `audit-open` CLI rather than private functions:
archived-only (was 0/0/0/0 with `has_open_items=false`, now 1/1/1/1 true),
mixed active+archived (was 1/1/1/1 — the archived half dropped — now 2/2/2/2),
active-only unchanged, and an all-resolved archived phase contributing 0.

That last one passed vacuously before the fix, because the archived path was not
reached at all; it was re-verified as genuinely discriminating afterward by
flipping one archived item to unresolved and watching the count rise.

Closes #3458

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>

* fix(#3458): restore the scan_error sentinel and show archive provenance

Adversarial review found one BLOCKER that the previous revision introduced,
which a green remote-runner suite did not catch because nothing in the tree
asserts `scan_error` at all.

## The regression

Consolidating four hand-rolled walks into `listAuditPhaseTargets` swallowed the
active-root `readdirSync` throw in a bare `catch {}`. Pre-fix each scanner
returned `[{scan_error: true, …}]`; after, each returned `[]`. Measured with
`.planning/phases` created as a FILE (so `existsSync` passes and `readdirSync`
throws ENOTDIR):

  before this fix: uat_gaps/verification_gaps/context_questions/deferred_items
                   each `[{"scan_error":true,…}]`
  the regression:  each `[]`

`complete-milestone.md` re-runs `audit-open --json` and reads those counts, so a
machine consumer could no longer tell "I/O failed" from "verified clean" — the
exact conflation this issue exists to remove, reintroduced on the failure path.
`listAuditPhaseTargets` now reports `activeUnreadable` and each scanner pushes
the sentinel shape recovered verbatim from `origin/next`, not reinvented.

The docstring claiming the active enumeration was "UNCHANGED" was false while
that sentinel was missing, and is corrected to state what is actually preserved.

An unreadable ARCHIVED root deliberately gets NO sentinel: there was no archived
read before, so there is no consumer contract to preserve, and adding one would
conflate the ordinary "no milestones archived yet" state with a real I/O failure.

## The operator could not see the archive

`formatAuditReport` is the surface the gate actually shows a human —
`complete-milestone.md` runs it without `--json` — and it never rendered
`archived_milestone`. With `01-alpha` in both roots the identical line printed
twice with nothing to tell them apart, and `[R] Resolve` sends the operator to
`.planning/phases/01-alpha/` where the archived one does not exist. Phase
numbering restarts at `01` after each archive, so that collision is the common
case, not an edge case. All four loops now render ` (archived vX.Y)`; active
lines stay byte-identical.

## Archived milestones sorted wrong

`getArchivedPhaseDirs` ordered milestones with `.sort().reverse()` —
lexicographic, so `v1.9` outranked `v1.10`. Measured order for v1.0/v1.9/v1.10
was `v1.9, v1.10, v1.0`. Now a numeric-segment descending compare. Pre-existing,
but this change is what first surfaces it in audit output.

## Tests

The blocker's regression test fails against the previous revision. Added:
`archived_milestone` present on archived items and absent (not `undefined`) on
active ones; the unreadable-active-root sentinel across all four categories; an
unreadable archived root still leaving the active half scanned; the
duplicate-name case producing two distinct entries that the human report
distinguishes; and the v1.10-before-v1.9 ordering.

`docs/COMMANDS.md` documents the archived scanning and the new field.

Closes #3458

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>

* fix(#3458): stop filesystem names forging lines in the audit report

Found by the security review of this branch. Pre-existing on `next`, fixed here
because it defeats the exact gate this PR is hardening.

`audit-open`'s human report is the surface `/gsd-complete-milestone` shows an
operator to decide whether a milestone may close. A `.planning/` tree authored
by someone other than that operator — a cloned repo — could contain a directory
literally named:

    zz<newline>0 open items require decisions.<newline><ESC>[2K<ESC>[1G FORGED

and the report printed `0 open items require decisions.` as its own line, with
raw ESC bytes reaching stdout able to erase or overwrite the lines above it.
Reproduced against the real CLI before fixing, and again after.

## Why not just harden sanitizeForDisplay

Because that helper's contract is multi-line prose — it removes protocol-leak
lines while deliberately preserving the newlines between legitimate ones, which
`tests/security.test.cjs` pins. Stripping CR/LF there would have broken a
correct test to paper over a different problem.

The two jobs are genuinely different, so there are now two helpers. New
`sanitizeLabel` (`src/security.cts`) is for values that are semantically ONE
LINE and derived from a filesystem NAME. It ESCAPES rather than strips C0
(including ESC/CR/LF), DEL and C1, so a doctored name renders visibly as
`\n` / `\x1b` instead of being silently normalized — the report stays honest
about what is in the tree. Ordinary input passes through byte-identical.

## Nine sites, not four

The first pass covered the four phase-scoped scanners. A sweep of the rest of
the file found the identical class in five more — `scanDebugSessions`,
`scanQuickTasks`, `scanThreads`, `scanTodos`, `scanSeeds` — emitting
name-derived `slug` / `filename` / `seed_id` through the prose sanitizer.
`scanQuickTasks`' `date` had no sanitization call at all.

Every emitted field in the file is now classified and the sweep recorded:
`slug`, `filename`, `seed_id`, `phase`, `file`, `archived_milestone`, `date` are
name-derived and take `sanitizeLabel`; `hypothesis`, `status`, `updated`,
`title`, `priority`, `area`, `summary`, `questions[]` and deferred-item `text`
are content and keep `sanitizeForDisplay`. No name-derived value reaches output
unsanitized.

`--json` was already safe — JSON string encoding escapes control characters, and
a crafted name cannot break out of the string. Verified rather than assumed.

Closes #3458

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>

* chore(#3458): backfill changeset pr number

* test(#3458): skip control-character fixtures where the OS forbids the name

CI red on `test (windows-latest, 24, shard 1/3)`: the four forgery-rejection
tests build directories whose names embed a newline and ESC, and NTFS forbids
control characters in path components, so `mkdir` threw ENOENT.

The remote runner is Linux-only, so it could not have caught this class.

Semantically the skip is honest rather than a workaround: on Windows the
directory-name forgery vector does not exist, because the OS refuses to create
the name. The sanitizer's own behavior stays covered there by the
`sanitizeLabel` unit tests, which are pure string tests with no filesystem
calls — verified.

Uses the repo's established capability-probe convention
(`tests/adr-index-gate.test.cjs`'s `trySymlink`), which `t.skip()`s on the real
errno rather than branching on `process.platform`, and whose comment gives the
reason: a bare `return` "would silently report a PASS ... and hide the gap this
guard exists to close". A skipped test is visibly skipped.

Swept every test added on this branch for names Windows would reject or POSIX
path assumptions; these four were the only ones.

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>

* feat(#3458): make [A] Acknowledge actually suppress, without overwriting a verdict

Making archived phases visible exposed the other half of the problem: an item
unresolved at a milestone close now resurfaces at every later close forever,
because `[A] Acknowledge` wrote a prose block to STATE.md that
`auditOpenArtifacts` never reads. `verified_closeout` became unreachable and the
gate degraded to a mandatory `[A]` every time.

## The prompt does not change

`[A] Acknowledge all` already promises "document as deferred and proceed with
close". It documented but never deferred. This makes `[A]` do what it says.
`[R]` and `[C]` stay abort paths. No "carry forward" option is invented — an
item that is not acknowledged simply keeps surfacing, which is the default.

## The marker lives inside the artifact

Not a ledger. The audit mints no ids and has no stable identity — `phase` is a
token that collides across directories, `file` for deferred items is a constant,
and identity otherwise degrades to the item's own prose after a lossy sanitizer.
Any ledger must re-derive that key every close, so a reworded item silently
un-suppresses or, worse, mis-suppresses a different one. Storing the
acknowledgment next to the thing it suppresses makes that class of bug
structurally impossible, and it is the pattern `src/uat.cts` already argues for
with `deferred-items.md`'s in-place `status: resolved`.

## The marker is verdict-preserving and self-invalidating

`status:` is never overwritten — writing `resolved` into an unresolved UAT would
be a lie in the artifact of record, and the disclosure has to be additive.

    audit_acknowledged:
      milestone: v1.0
      at: 2026-08-15
      status: gaps_found      # snapshot of what was true when acknowledged

Suppression applies ONLY while the snapshot still matches reality: `status` for
seven categories, `question_count` for context questions, and for deferred items
a new per-entry `status: acknowledged` distinct from `resolved`, which keeps
meaning "actually fixed". Change the artifact and the acknowledgment stops
applying, so the item comes back on its own.

That is what makes re-opening answer itself with no extra state, and it fails in
the safe direction: a stale acknowledgment can never hide a NEW problem. A
malformed marker is treated as absent — a bad marker must never silence an item.

The check is ONE shared `isAuditItemAcknowledged`, not nine copies. This file has
already been through that defect family twice in this PR.

## Observable, not silent

`audit-open --json` now reports an `acknowledged` count beside `counts`, so a
reviewer can tell a close that is clean because things were fixed from one that
is clean because things were silenced.

## Writer

New `audit-open acknowledge` verb snapshots current state itself, so the marker
is never hand-authored from workflow prose — the gap that left the STATE.md
block with no writer, no schema and two conflicting formats. Writes route
through the existing path-confinement seam.

## Two deliberate limits, failing closed

Heading-delimited deferred entries (#3457) are REFUSED with
`unsupported_heading_shape` rather than edited, because mapping a heading entry
back to its exact source span is not safely derivable when headless and heading
entries interleave in one file. A loud refusal beats a mis-targeted write.

A quick task with no summary gets one created to carry the marker, since there
is otherwise nowhere to put it.

## Tests

Self-invalidation is the important one and is covered per category: acknowledge,
then change the status or question count, and the item resurfaces. Also
malformed markers not suppressing, `status:` byte-unchanged after acknowledging,
the writer refusing a path outside the project, and the four original #3458
scenarios unchanged.

Closes #3458

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>

* feat(#3458): wire [A] to the acknowledge verb and converge the disclosure table

Consumer side of the suppression seam.

## The workflow stops hand-authoring the mechanism

`[A]` now calls `audit-open acknowledge` once per open item, then writes the
STATE.md `## Deferred Items` table as before. The table stays as a
human-readable disclosure; it is no longer the mechanism. That closes the gap
where the block had no writer, no schema and no reader — the marker is now
written by the tool, which snapshots current state itself.

The `[R]` / `[A]` / `[C]` prompt is unchanged, `[C]` still means "Cancel — exit
without closing", and no carry-forward option is invented.

The all-clear branch now distinguishes a close that is clean because items were
FIXED from one that is clean because they were ACKNOWLEDGED, using the
`acknowledged.total` count, and carries that into the MILESTONES.md disclosure
line beside the existing override count. A clean close that was bought with
acknowledgments should say so.

## Format drift resolved

Two incompatible `## Deferred Items` shapes shipped simultaneously — 3 columns
in the workflow, 4 in the template, with different body lines. Converged on one
5-column shape carrying the source Milestone, since archived items now appear
and the archived-milestone disambiguator was previously discarded at write time.
The workflow enumerates the categories instead of trailing off in `...`.

## Ack fragment bookkeeping

`complete-milestone.md` grows 6,764 bytes (31,228 → 37,992; cap 61,440), covered
by a new `tests/emitted-drift-acks/3458-*.json`.

`2962-zsh-nomatch-for-glob-portability.json`'s `complete-milestone.md` entry is
REMOVED — the no-duplicate-path rule hard-blocks two sources naming one path.
That entry is spent: the nullglob shim it acknowledges is present in both
`origin/next` and the CI emitted baseline `fd2b97a5`, so its ripple is already
absorbed and it can never clear anything again — verified directly, not assumed,
and the gate's own message directs deleting spent entries. Its other three files'
entries are untouched.

`scripts/sync-runtime-launcher.cjs` wanted to rewrite `explore.md` as well —
pre-existing drift unrelated to this change, reverted. `complete-milestone.md`
still carries exactly one canonical preamble.

Docs cover the verb's real flag surface, the marker's verdict-preserving and
self-invalidating behavior, and the new `acknowledged` count. A second `Added`
changeset covers the verb, since the existing `Fixed` fragment describes only
the archived-phase scanning.

Closes #3458

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>

* fix(#3458): close three blockers in the acknowledgment seam

Adversarial review of the seam. Three BLOCKERs, one of which disproves a safety
claim I published in the PR body, the changeset and the docs.

## The claim was false; the code is fixed rather than the claim softened

I wrote that "a stale acknowledgment can never hide a NEW problem". It could.
`context_questions` snapshotted only the question COUNT, so replacing two
acknowledged questions with two brand-new blockers kept the item suppressed.
`uat_gaps` snapshotted only `status`, so adding five more pending scenarios
(`open_scenario_count` 1→6) kept it suppressed.

The snapshot now identifies CONTENT, not size: a digest of the whole question
set, and a status + open-scenario-count composite. Any edit invalidates. The
other seven categories were checked and their single tracked dimension is
already the whole story. Both disproofs now resurface the item.

## Writing to the wrong line, and reporting success

`acknowledgeDeferredItem` built an unanchored regex and exec'd it over the whole
file while match-selection and the ambiguity guard ran over the section body
only, so the write landed at the first match ANYWHERE. A file with `# Notes`
holding `- Fix the parser` above a `## Deferred Items` section holding the same
bullet: the CLI exited 0 saying `acknowledged: true`, injected `status:
acknowledged` under `# Notes`, and re-audit still reported the entry open. It
corrupted unrelated content, suppressed nothing, and claimed success — and since
`--file` is unconstrained the same path could inject into a UAT or VERIFICATION
body.

Matching is now anchored to the selected section, and the matched span is
re-verified against the selected entry before any write; a mismatch refuses with
`match_verification_failed` rather than writing.

## Acknowledging todos hid the ones never shown

`scanTodos` capped at five files and then checked acknowledgment. With seven
todos, acknowledging the five that were LISTED drove `todos: 0`,
`has_open_items: false`, and items six and seven never appeared in any later
scan. The workflow's own "repeat until no todos items" remedy terminates after
one pass. Pre-feature this was unreachable because the count was pinned at five.

That is silent over-suppression — the exact direction this PR exists to remove.
Acknowledged items are now filtered BEFORE the display cap, so unacknowledged
todos beyond it still drive the count.

## The [A] branch could not fail closed

Every acknowledge call sat in a `cmd | while read` pipeline with no status
accumulation, so any refusal was discarded and the close proceeded as
`override_closeout`. Separately, `io.output` swaps payloads over 50000 chars for
an `@file:<path>` sentinel — every `jq` would then fail, every loop body run
zero times, nothing be suppressed, and the close happen anyway.

Both closed: failures accumulate across all invocations and halt before close,
and the sentinel is dereferenced using the same pattern `verify_readiness`
already uses for `INIT_MANAGER`. Quoting was verified sound by the review and is
left alone.

## Also

Suppression is now visible in the human report, not only `--json` — the
"clean because fixed vs clean because silenced" distinction was promised for the
surface an operator actually reads.

The CRLF-preservation branches in the writer were dead: every `.md` write goes
through `_normalizeMd`, which normalizes line endings and blank lines whatever
the writer does. Deleted and documented rather than left as code that cannot run.

## Why these shipped

The review named it exactly: there was no coverage for
`unsupported_heading_shape`, `ambiguous`, `not_found`, duplicate-text
mis-targeting, todos beyond the cap, or CRLF. All are now tested, alongside both
snapshot disproofs and the mixed-section fixture.

Closes #3458

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>

* test(#3458): align the items-open footer wording with its assertion

Remote runner red on one test: the items-open footer must match
`/previously acknowledged item/i`.

The disclosure was NOT missing — the items-open branch already printed
"N additional items previously acknowledged and still suppressed." The word
order simply did not match the regex the test in the same change asserts. A
wording mismatch between my own test and my own implementation, not a behavior
gap.

Reworded to "N previously acknowledged items also suppressed above the M open
items", which satisfies the assertion and states the relationship between the
two counts more plainly than the original did.

Swept `formatAuditReport` for other branches that could skip the tally: the only
early return is the all-clear path, which already discloses it. `scan_error`
sentinels are filtered per category and excluded from `counts.total`, so an
all-error project falls through to that same branch. No inconsistency remains.

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>

* fix(#3458): splice by carried span, digest the untruncated question set

Security review of the writer. Both findings are the same shape, and both are
cases where an earlier fix of mine was incomplete in the same direction: a value
derived for DISPLAY was reused for an IDENTITY or LOCATION decision.

## Writing to the wrong entry, again

The previous fix anchored matching to the `## Deferred Items` SECTION but still
re-found the entry inside it with an unanchored regex, so the write landed at
the first SUBSTRING occurrence rather than the entry's own span. The
`match_verification_failed` guard could not catch it, because the mis-targeted
span is byte-identical to the target.

Probe-confirmed, in a cloned repo's own artifact:

    - CRITICAL unfixed auth bypass
      see also: - minor typo
    - minor typo

Acknowledging "minor typo" appended `status: acknowledged` into the CRITICAL
entry, suppressing it at every future close, while the typo stayed open — exit
0, `"acknowledged": true`. A variant where the target text appears inside
unrelated prose split that line mid-sentence, acknowledged nothing, and still
exited 0, so the workflow's `ACK_FAILURES` halt never fired.

Fixed structurally rather than with a better regex: `splitGapsEntriesWithSpans`
carries each entry's own character span out of the splitter, and the write
splices by that recorded span. The location is already known at selection time —
re-deriving it by searching was the entire defect class. Added as a sibling so
`splitGapsEntries`' three existing callers are untouched. With index-splicing,
`match_verification_failed` becomes a genuine independent cross-check instead of
a guard that could never fire.

## The digest was blind past the third question

`deriveOpenQuestions` truncated to three questions, and clamped each to 200
chars, BEFORE the digest hashed it — so the snapshot could not see the fourth
and later. Ship three innocuous questions, acknowledge, then add real blockers,
and they are permanently invisible: measured `open=0, acknowledged=1`, report
"All artifact types clear."

That is the same self-invalidation property this digest was added to guarantee
one revision ago. The digest now covers the untruncated list; truncation is
display-only.

Found while fixing it: the previous digest joined on a literal raw NUL byte
embedded in the source — collisions are constructible, and reachable through
attacker-controlled YAML `\x00` escapes. Verified both ways. Replaced with a
length-prefixed encoding so no two question sets can collide by concatenation.

## Sweep

Because this is the third incomplete fix on this seam, every identity and
location derivation was swept for the display-vs-identity confusion: uat_gaps
uses status plus a full-content count, the other seven categories use a scalar
status or presence, the deferred `--text` identity is never truncated, and all
five flat categories resolve their file by path rather than by content search.
No further instances.

Closes #3458

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>

* test(#3458): correct two assertions that over-reached the measured behavior

Remote runner red on two of the F1 tests. The source is correct — reproduced
both fixtures against the built CLI — and both failures were bugs in the
assertions I wrote. `src/` is untouched by this commit.

The first is worth recording. It computed the CRITICAL entry's block as

    content.slice(content.indexOf('- CRITICAL'), content.indexOf('- minor typo'))

and `indexOf` found the FIRST SUBSTRING occurrence, which lives inside that
entry's own continuation line `  see also: - minor typo`. The block was
truncated mid-line, so the assertion could never match. The test committed the
exact first-substring-match mistake it exists to catch, one revision after that
mistake was fixed in the source.

The second asserted `deferred_items === 0` after acknowledging the typo entry,
but the decoy `- Note: reference - minor typo elsewhere, ignore` is itself an
open entry and was never acknowledged, so the correct count is 1. It now also
asserts WHICH item remains open — that is what actually proves the right entry
was suppressed, and the original assertion would have passed even if both had
been silenced.

Both now derive their expectations from measured CLI output. A comment records
that the write seam normalizes markdown (`_normalizeMd` inserts a blank line
before a list item following a non-list line) so the inserted line is not later
mistaken for a regression; that is repo-wide behavior for every `.md` write
through the single write projection, not something this change should diverge
from.

Root cause of both: the previous two dispatches verified behavior with direct
CLI probes but never executed the test file, so assertions could over-reach what
had actually been measured. Every other assertion added in those two commits has
since been re-derived from real output; no further mismatches.

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>

---------

Co-authored-by: sim <sim@local>
Co-authored-by: Claude Opus 5 <noreply@anthropic.com>
2026-08-15 17:00:52 -04:00
Tom Boucher
59e7a677fe fix(#3511): scope every phase-directory scan to the phase it belongs to (#3535) 2026-08-15 07:02:33 -04:00
Tom Boucher
0624c5da6f chore(#3212): src/text-lines.cts is the sole owner of line-terminator handling — Phase 2 (#3420)
* test(#3413): failing-first suite for the line-terminator seam

Phase 2 of epic #3212 (ADR-3212 §3/§6/§7). Tests only — src/text-lines.cts
does not exist yet, so tests/text-lines.test.cjs fails with MODULE_NOT_FOUND
at its require line, which is the intended RED.

The frontmatter.test.cjs additions drive #3360 (confirmed-bug) fail-first:
parseMustHavesBlock currently returns [] for every must_haves block on a
CRLF-authored plan file, because \r is its own LineTerminator in ECMAScript
and two /m-anchored \s* patterns can absorb it, inflating a captured indent
by one character and tripping the "not nested under must_haves" guard.
Verified locally against the current (unfixed) compiled module: both the
direct repro and the silent-exit "blank line before must_haves:" variant
return [] today. A parity property test (crlf vs lf must deep-equal for
every block name) matches a pattern this maintainer has required repeatedly
for prior CRLF fixes in this codebase (Cortex-recorded, verify_intent=held).

The no-crlf-fragile-split.rule.test.cjs additions lock the eslint rule's
future fix-hint text (pointing at splitLines()) and its self-reference
non-violation (the seam's own correct \r?\n split must never flag itself).

Design: .gsd/phase/chore-3413-text-lines-seam/40-design.md
Test matrix: .gsd/phase/chore-3413-text-lines-seam/50-test-matrix.md

* chore(#3413): src/text-lines.cts owns line-terminator handling

Phase 2 of epic #3212 (ADR-3212 §3/§6/§7). Adds splitLines/normalizeEol/
detectEol/joinLines and migrates frontmatter.cts onto it.

parseMustHavesBlock (#3360, confirmed-bug) returned [] for every
must_haves block on a CRLF plan file. Root cause: \r is its own
LineTerminator in ECMAScript, so under /m two \s*-anchored indentation
lookups could match at the position INSIDE a \r\n pair and absorb the
terminator, inflating the captured indent by one character and tripping
the "not nested under must_haves" guard. Two silent exits, one with a
diagnostic and one without (a blank line before must_haves: hits the
silent path). Fixed by converting both lookups from a whole-string /m
match to split-then-scan — splitLines first, then a per-line, non-/m
match — the same structural pattern parseYamlRegion (30 lines away in
the same file) already used safely. Nothing downstream of the two
lookups changed; blockLines is now sliced from the already-split array
instead of re-splitting a substring, but its contents are unchanged for
LF input, and the per-line dash/kv parsing loop is untouched.

A parity property test (CRLF and LF plans parse to identical must_haves
for every block name) matches a pattern this maintainer has required
repeatedly for prior CRLF fixes in this file's neighborhood (Cortex:
7 recorded decisions, verify_intent -> held).

frontmatter.cts's other .split(/\r?\n/) call sites (parseYamlRegion,
isFrontmatterShaped, sliceTopLevelFrontmatterSegments, spliceFrontmatter)
are rerouted onto splitLines — a literal 1:1 substitution, zero behavior
change, since splitLines IS that same regex plus a type guard.

The 4 scripts/normalizeLineEndings copies (gen-registry, gen-loop-host-
contract, gen-capability-registry, gen-context-index) are deleted and
rerouted onto normalizeEol, which strips a bare unpaired \r exactly like
the deleted copies did (not just \r\n pairs) -- verified against each
script's own --check mode against its real generated output.

local/no-crlf-fragile-split widens from tests/ to src/**/*.cts, with its
fix-hint message now naming splitLines() instead of the raw regex --
the prohibition finally has a primitive to point at. Detection logic
unchanged in this phase (deliberate scope limit, see design doc Known
limits: the rule doesn't yet recognize safeReadFile/platformReadSync as
a content source, and has no detector for the \s-adjacent-to-anchor
shape that is #3360's actual mechanism -- the CLASS is converged by the
direct fix + regression test regardless).

joinLines/detectEol are NOT wired into frontmatter.cts's own write path
(cmdFrontmatterSet/Merge -> platformWriteSync) -- verified that
platformWriteSync already, unconditionally converts CRLF->LF on every
.md write today as a pre-existing policy owned by a different module,
and ADR-3212's backward-compatibility clause rules out a file-format
change in any phase. Stated explicitly in Known limits rather than left
for a reader to discover.

Six-gate ripple: .gitignore, eslint.config.mjs (src/**/*.cts block),
docs/INVENTORY.md + INVENTORY-MANIFEST.json (regenerated), CONTEXT.md
glossary (Text Lines Module, mirroring Phase 1's Pattern Module entry).

Design: .gsd/phase/chore-3413-text-lines-seam/40-design.md
Test matrix: .gsd/phase/chore-3413-text-lines-seam/50-test-matrix.md

* fix(#3413): fix 13 pre-existing CRLF-fragile splits the widened rule found

Widening local/no-crlf-fragile-split from tests/ to src/**/*.cts (the
previous commit) immediately surfaced 13 real, pre-existing violations
across 10 files -- undetected until now because the rule never scanned
src/. This is the exact defect class ADR-3212 exists to close, playing
out again one phase after Phase 1 hit the same shape ("the new lint
rule -- once live -- found 27 more"). Per CLAUDE.md's no-defer rule,
fixed inline rather than deferred or suppressed; there is no
established suppression convention for this rule in src/ and inventing
one now would undermine the point of widening it.

audit.cts, broken-windows.cts, core-utils.cts, init.cts, milestone.cts,
phase.cts (x3), profile-output.cts, roadmap.cts (x2): bare-\n splits or
regex character classes widened to \r?\n / [^\r\n], each following the
same pattern already established migrating frontmatter.cts.

phase-estimation.cts: `\r?(?:\n|$)` restructured to `(?:\r?\n|\r?$)` --
already semantically CRLF-safe, but the rule's lexical scanner doesn't
recognize \r? guarding a group (only \r? immediately before a literal
\n). Verified the two forms are equivalent across all four EOL/EOF
cases before restructuring, not assumed.

roadmap-upgrade.cts needed two coupled sites, not the one flagged line:
computeMigrationPlan and applyMigration must agree on line
representation for the lines[edit.lineIndex] === edit.from equality
check to hold, and the write-back needed joinLines + detectEol -- a
plain lines.join('\n') was silently flattening a CRLF ROADMAP.md to LF
wholesale on every migration. This is the first real production
consumer of joinLines/detectEol in this epic (frontmatter.cts's own
write path doesn't use them -- see the previous commit's Known limits).

Fixing the 13 flagged sites surfaced 4 more adjacent same-shape sites
the rule doesn't track (.search() and new RegExp(dynamicString) aren't
in its tracked call/construction set). Investigated each empirically --
hand-tracing this exact bug class already produced one wrong conclusion
earlier in this phase (a detectEol design-doc arithmetic error), so
these were verified with real CRLF fixtures rather than reasoned about
on paper:

  - audit.cts (scanTodos): REAL bug, fixed. `bodyMatch.trim().split
    ('\n')[0]` leaked a trailing \r into a user-visible todo summary on
    CRLF input -- .trim() only strips the string's outer edges, not a
    \r sitting mid-string before the first bare \n. Now splitLines(...)
    [0].
  - phase.cts (cmdPhaseInsert, bullet-style branch): REAL bug, fixed.
    [^\n]* in targetBulletPattern swallowed a line's trailing \r on
    CRLF input, shifting the computed insert position to land INSIDE
    the \r\n pair; combined with a hardcoded '\n' bullet separator, a
    CRLF ROADMAP.md ended up with a mixed CRLF/LF result after an
    insert. Fixed with two coupled changes (either alone still
    corrupts, verified both ways): [^\r\n]* in the pattern, and the new
    bullet's leading terminator now comes from detectEol(rawContent).
  - roadmap.cts (cmdRoadmapAnnotateDependencies phase-boundary scan):
    investigated, genuinely safe, left untouched. The .search(/\n#{2,4}
    .../) boundary-finder and the [^\n]*-based heading match were
    empirically verified on a 3-phase CRLF fixture -- the only stray \r
    ends up at the tail of an intermediate phaseSection string that is
    only ever used for .test()-based idempotency checks, never for an
    exact-match comparison or written back to disk. No corruption on
    round-trip.

Every fix re-verified: npm run build:lib clean, npx eslint
'src/**/*.cts' --no-cache reports 0 problems (was 13), and each
fixed function's existing LF-input tests were spot-checked unchanged.

* fix(#3413): apply orthogonal review findings

Two isolated review engines (correctness + security) ran against the
full diff and found three majors, one real security issue, and several
disclosure-worthy minors. All fixed or explicitly disclosed with
evidence; nothing deferred.

MAJOR — detectEol's tie-break contradicted its own documented contract.
Code returned '\n' on a 1:1 crlf/bare-LF tie; every doc (design doc,
CONTEXT.md, the function's own comment) says ties resolve to '\r\n'.
The existing test masked this by reusing the same tie fixture the
buggy code happened to satisfy, rather than a genuine LF-majority
case. Root cause: an Edit attempted earlier in this phase to fix this
exact arithmetic error was blocked by the tier guard, and a later
dispatch was incorrectly told it had already landed. Fixed: condition
is now crlfCount >= bareLfCount; the test fixture corrected to a
genuine 2:1 majority, with a new explicit tie-case test.

MAJOR — phase.cts's cmdPhaseInsert built an EOL-aware bulletEntry via
detectEol(rawContent), justified by a comment claiming a hardcoded
'\n' corrupts a CRLF ROADMAP.md. False: this write goes through
platformWriteSync, whose normalizeContent/_normalizeMd unconditionally
converts CRLF->LF for any .md target — the templating was inert dead
code, erased before the file is ever written. Reverted to hardcoded
'\n', comment corrected to state the true reasoning. The separate
[^\n]* -> [^\r\n]* widening one function up (a real splice-position
fix, independent of final EOL) was kept.

MAJOR — roadmap-upgrade.cts's stated rationale for switching onto
splitLines/joinLines was wrong (both functions always agreed on line
representation, before and after — the claimed equality-check risk
never existed), and the change it justified introduced a real
regression: forcing every line onto one dominant terminator silently
rewrites untouched lines' EOL on a mixed-CRLF/LF ROADMAP.md. This
write path uses raw fs.writeFileSync, not platformWriteSync, so unlike
the phase.cts case above the regression is genuinely live.

Fixing this took two attempts. The first attempt (revert to
split('\n')/join('\n') plus a suppression comment) was correctly
blocked by an agent that discovered local/no-crlf-fragile-split is a
PROTECTED_RULES entry in tests/portability-rule-disable-ban.test.cjs —
a hard, out-of-band, ADR-1703-governed guardrail banning any
eslint-disable of this rule anywhere in src/**/*.cts. That agent also
detected and correctly disregarded an injected instruction that
appeared in tool output during a git operation, per this session's
untrusted-content policy. The actual fix: computeMigrationPlan
reverted to roadmapContent.split('\n') (confirmed lint-clean — the
rule's data-flow tracking only follows a variable's initializer, and
this one is declared empty then reassigned in a try block).
applyMigration's write-back now splices edits against the ORIGINAL
content string via indexOf('\n', pos) boundary-walking instead of a
full split/rejoin, so every untouched character — including every
line's own terminator — is copied byte-for-byte. A capture-group split
(/(\r\n|\n)/, preserving terminators inline) was tried first and
empirically confirmed to still trip the rule before this approach was
chosen instead.

MINOR (security) — roadmap.cts's cmdRoadmapAnnotateDependencies used
the STRING form of String#replace, so $&, $`, $', $1-$9 inside
must_haves.truths content (author-controlled) were interpreted as
replacement directives, splicing unrelated ROADMAP.md text into the
result. Fixed with the function-replacement form, which is never
pattern-interpreted. Verified before/after with the reviewer's exact
repro.

Also disclosed rather than silently left: test matrix row 31 (four
planned CRLF-materialized regression tests) was never implemented as
separate files — corrected to record the actual verification (a
manual --check run plus incidental existing coverage via each script's
normalizeLineEndings: normalizeEol alias). parseMustHavesBlock's LF
behavior was claimed byte-for-byte unchanged but the old
yaml.indexOf(blockMatch[0]) substring search could match an unrelated
earlier occurrence of the header text (e.g. inside a quoted value) —
the split-then-scan fix incidentally also closes this, a strict
improvement now recorded in the design doc rather than left implicit.

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>

* fix(#3413): checkpoint 2 red — missing eslint ignore entry, RuleTester config error

Checkpoint 2 came back red with 5 failures on the reviewed sha, both
gaps genuinely undetectable by any local gate.

eslint.config.mjs was missing the 'gsd-core/bin/lib/text-lines.cjs'
ignores-list entry (ADR-457: generated .cjs artifacts are excluded from
direct type-aware linting). Phase 1's sibling entry (pattern.cjs) sits
two lines above it and was the exact precedent read while researching
the six-gate ripple for this module -- missed anyway. Caught by
tests/repo-invariants.test.cjs's bin/lib coverage-tracking test, which
only runs on the remote suite.

tests/no-crlf-fragile-split.rule.test.cjs's row-32 case specified both
`messageId` and `message` on the same RuleTester error assertion --
ESLint's RuleTester rejects that combination outright. This existed
since the test was first authored and was never caught locally: `npx
eslint` only lints the file's syntax, it does not execute RuleTester,
and local `node --test` is hard-blocked in this repo -- the assertion
had never actually RUN before this checkpoint. It was even present in
checkpoint 1's failure list, listed there as one of the "expected RED"
tests; I matched it against my expected-failures list by test NAME
only and never inspected the actual failure detail closely enough to
notice it was failing for the wrong reason (a RuleTester config error,
not the intended message-text mismatch). Fixed by keeping `message`
(the exact-text assertion the test exists to make) and dropping
`messageId`. Verified the crlfFragileSplit message string in
eslint-rules/no-crlf-fragile-split.cjs matches this assertion
character-for-character, and swept every other invalid case in the
file for the same double-specification bug (none found -- all
pre-existing cases use messageId alone).

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>

* docs(#3413): add Fixed changeset for the #3360 CRLF parsing fix

The sole user-visible effect of this phase. No breaking-change label
or Changed fragment needed — ADR-3212's Backward Compatibility section
names the Node floor (Phase 1, already shipped) as the epic's only
breaking change; Phase 2 has none.

* chore(#3413): backfill changeset pr number to 3420

---------

Co-authored-by: sim <sim@local>
Co-authored-by: Claude Opus 5 <noreply@anthropic.com>
2026-08-13 20:27:48 -04:00
Tom Boucher
343835facc refactor(#3183): route live-plan counting through scanPhasePlans (#3199)
* refactor(#3183): route live-plan counting through scanPhasePlans

scanPhasePlans becomes the sole owner of the live-plan derivation. Twenty-one
independent re-derivations across seven modules now route through it, and
scripts/lint-plan-count-drift.cjs reports zero, scanning the whole repo rather
than an allowlist (ADR-3180 Decision 4a).

The epic scoped this at three copies. A whole-repo guard found twenty-six sites
across nine files, so Phase 1 absorbs every live-plan re-derivation and Phase 3
narrows to window plus sentinel enumeration.

Two sites are exempt with a documented reason rather than a bare allowlist:
audit.cts scans one quick task's own directory for a single completion record,
and gsd2-import.cts reads a foreign GSD-2 tasks/ layout during a one-time
import. Neither is a phase directory.

scanPhasePlans gains allPlanFiles (pre-supersession) alongside planFiles so one
owner answers both questions: verify.cts's numbering-gap check wants every plan
on disk, its pairing check wants the live set. Both fields are additive.

Highest-severity fix: cmdPhasePlanIndex, which feeds execute-phase wave
scheduling, was scheduling status:superseded plans into waves and reporting zero
plans for the post-#3139 nested layout.

filterPlanFiles and filterSummaryFiles are deleted; getPhaseFileStats orphaned
them and only their own tests still called them.

New leaf module src/planning-scope.cts carries the frozen SCOPE discriminator,
with its six-gate ripple closed: gitignore, inventory manifest, INVENTORY.md and
the CONTEXT.md glossary.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_012qYy4ZWif3sscQyMsup6Ma

* docs(#3183): amend ADR-3180 for the Phase 1/3 boundary re-slice

The contract held; the phase boundary did not. The whole-repo drift guard found
26 re-derivations across 9 files against the epic's estimate of 3, and
cmdProgressRender re-derives both enumeration and plan counting on adjacent
lines, so DW4 was unsatisfiable within Phase 1's original file scope.

Records the amended scope, scanPhasePlans's new allPlanFiles field,
findOrphanSummaries, the two documented exemptions, the re-derived Tier-2
table, and the describeNonCanonicalPlans trap for later phases.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_012qYy4ZWif3sscQyMsup6Ma

* fix(#3183): complete the canonical pairing rule and gate the naming diagnostic

The remote runner went red with 13 deterministic failures on both lanes,
and they were right: replacing verify.cts's canonicalPlanStem pairing with
summaryCandidates dropped a case the bespoke rule covered. A plan carrying a
descriptive slug after its id (68-01-scaffolding-PLAN.md) pairs with its
canonical-stem summary (68-01-SUMMARY.md), and summaryCandidates generated no
such candidate, so the plan read unsummarized.

The fix is to complete the one rule rather than restore a second:
summaryCandidates gains a canonical-id candidate, narrowed to fire only when an
id pair was actually extracted. countMatchedSummaries, findUnsummarizedPlans
and findOrphanSummaries all inherit it. The two-plans-one-summary collision
behaviour of the original rule is preserved deliberately and documented in
place.

Second defect, independently root-caused while verifying: routing the #2893
naming diagnostic through scanPhasePlans exposed it to the loose /PLAN/i
fallback, which is correct for counting and wrong for a naming check — a
non-canonically-named file was accepted as a valid plan and the diagnostic
went silent. cmdPhasesList, cmdFindPhase and cmdPhasePlanIndex now intersect
with a strict isCanonicalPlanFile predicate before reporting names.

Same class as the describeNonCanonicalPlans trap already recorded in ADR-3180:
a question about file naming wants the physical, strictly-matched set; only a
question about outstanding work wants the live set.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_012qYy4ZWif3sscQyMsup6Ma

* chore(#3183): register planning-scope.cjs in the eslint migration list

tests/repo-invariants.test.cjs asserts every bin/lib/*.cjs is linted xor
ignored per its ADR-457 migration state. The new planning-scope module closed
five of the six .cts ripple gates - gitignore, inventory manifest, INVENTORY.md
and the CONTEXT.md glossary - but not eslint, because that one is enforced by a
test rather than by lint:ci, so the local pipeline stayed green while it was
missing.

Generated from src/planning-scope.cts, so the .cjs is ignored and the .cts is
linted, matching every other migrated module.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_012qYy4ZWif3sscQyMsup6Ma

* fix(#3183): replace the plan-count drift detector with a literal tokenizer

CodeQL reported 4 high-severity js/redos alerts on REGEX_LITERAL_MD_RE, the
backtracking regex that finds "a regex literal mentioning PLAN/SUMMARY and an
escaped \.md". Five review rounds found it had two defects, not one:

  - EXPONENTIAL, then CUBIC. Its "any char" atom `(?:\\.|[^/\r\n])` let a `\.`
    pair be consumed either as one escape or as two class characters, which is
    exponential backtracking: 27,464ms on `"/\.mdplan" + "\.".repeat(28) + "X"`.
    Excluding `\` from the class killed that but left a cubic path — 23ms at
    N=200, 172ms at N=400, 1362ms at N=800 on `"/" + "PLAN\.md".repeat(N)` with
    no closing `/`. This guard is the last stage of `npm run lint:ci`, which CI
    runs on fork pull requests, so a crafted src/*.cts could stall the job.
  - A DETECTION HOLE. A character class holding a bare, unescaped `/` — e.g.
    `/SUMMARY[^/]*\.md$/`, an ordinary path-excluding filter — terminated the
    literal at that `/`, so the scan never reached `\.md` and the guard missed
    it entirely. (Classes holding an ESCAPED `\/` were already matched; the
    tests cover those separately as parity, not as regressions.)

Both defects have one root cause: regex-literal grammar — `\x` escapes, and
`/` inside `[...]` not terminating — is not expressible in a backtracking
regex. So the detector is now a tokenizer, not a regex.

readRegexLiteralAt reads the literal at a given `/` in a single left-to-right
pass with no backtracking, treating escapes as two-character units and
suppressing the `/` terminator inside a character class. findRegexLiteralMdMatch
restarts it at every `/` on the line, preserving the old "find anywhere"
behaviour; MAX_REGEX_LITERAL_LEN (400) bounds each read — including the
trailing-flag scan — which keeps the whole-line cost linear.

Results: cubic shape flat at 0.06-0.39ms out to N=3200 (25KB), exponential
shape 0.01ms at 28 reps and 0.00ms at 64, and the bare-`/` class shapes are now
caught. Differential against the old regex over 28,474 lines (those matching
FILENAME_TEST_RE but not PLAN_SUMMARY_LITERAL_RE, across src/tests/scripts/
gsd-core/bin/eslint-rules, excluding 265 lines with >6 backslashes on which the
old regex hangs): 6 differences, all the tokenizer returning the fuller or
newly-correct literal, 0 old-only misses. The `\.md` token stays
case-insensitive, matching the `/i` the old regex carried.

Also closes three holes in the same new file:

  - walk() tested entry.isFile(), false for a symlink, so a symlinked
    src/*.cts was silently unscanned — an evasion of a guard whose stated
    principle (ADR-3180 Decision 4a) is whole-repo discovery with no allowlist.
    It now resolves symlinks, but confined: file links must resolve inside the
    repo root, directory links inside the scanned dir itself. Every sibling
    drift guard in scripts/ uses the Dirent classification and never follows
    links, so following them unconfined would have made this the only linter
    able to read outside the tree — on fork PRs an arbitrary out-of-repo read
    whose matched fragments reach a public CI log. The narrower directory rule
    additionally stops `src/up -> ..` from sweeping the whole repo, and the
    skip list is now checked against resolved paths so `src/g -> ../.git`
    cannot reach .git/** or node_modules/**. Real paths are de-duplicated and
    files reported canonically, so a symlink alias cannot shift which
    FUNCTION_SCOPED_EXEMPTIONS key applies.
  - Both the reported fragment and the reported FILE PATH are attacker-
    controlled source text written straight to a CI log, and git permits
    control bytes in a filename. Both are now escaped — C0/C1/DEL plus the
    bidi and zero-width controls — so a crafted literal or filename cannot
    recolour the log, overwrite a line with CR, or fabricate a line that looks
    like this guard's own success output.

Regression coverage in tests/plan-count-single-owner.test.cjs: a child-process
probe over both pathological shapes (catastrophic backtracking is synchronous
and would freeze the suite rather than fail one test), the bare-`/` class
shapes verified to fail against the parent-commit blob, root-confinement tests
covering the outside-file, outside-directory, cycle, broken-link and duplicate
cases, direct isInsideRoot coverage including the sibling-prefix case that a
bare startsWith would let through, sanitizeForReport coverage, and
limit-1/limit/limit+1 coverage of MAX_REGEX_LITERAL_LEN derived from the
exported constant. The earlier structural assertion was dropped — it checked
for the substring `[^/`, which respelling the class as `[^\r\n/]` defeats
while staying exponential.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_012qYy4ZWif3sscQyMsup6Ma

* chore(#3183): backfill changeset PR number

Restores b77931869, which a force-push during the ReDoS remediation dropped.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_012qYy4ZWif3sscQyMsup6Ma

---------

Co-authored-by: sim <sim@local>
Co-authored-by: Claude Opus 5 (1M context) <noreply@anthropic.com>
2026-08-08 01:20:55 -04:00
Adnan
fc3fde05ee feat(#2646): surface unresolved deferred-items.md at milestone close (#2983)
* feat(#2646): surface unresolved deferred-items.md at milestone close

auditOpenArtifacts scanned eight categories; deferred-items.md was not
among them. #2287 made that file readable at the PHASE boundary
(audit-uat, /gsd-progress check 7), but one boundary up it stayed
invisible — and phase directories archive to milestones/vX.Y-phases/ by
default (#1871), so an out-of-scope discovery a phase agent correctly
recorded rather than fixed left the live tree at milestone close having
never reached the [R]/[A]/[C] prompt that exists to catch exactly this.

Adds deferred_items as a ninth scanner plus its count, its items entry
and its report section. The workflow needed no change: complete-milestone
branches on "any section with count > 0", so the new category flows
through the existing prompt.

The resolved/unresolved predicate is NOT reimplemented. uat.cjs already
exports parseDeferredItems, which owns the parsing rule (entries under a
`## Deferred Items` level-2 heading, else the whole file fail-safe;
RESOLVED only on an explicit case-insensitive `status: resolved` field).
The scanner requires it lazily, inside the scan, so audit-command-router's
property that a route never loads the module it does not need is
preserved. Two readers of one file sharing one predicate is the point —
duplicating the inequality is how they drift into disagreeing about what
"open" means.

Regression test proves fail-first: 9 of its 10 cases go red against the
pre-change tree. The tenth is the deliberate no-regression boundary (a
clean tree emits no section) and is green both ways.

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_015TQU48ETJjEmGLJjA6hdQ4

* docs(#2646): document the pre-close artifact audit and its nine categories

The /gsd-complete-milestone entry did not mention the audit at all, so
the gate that can stop a close was undocumented — and this change adds a
category to it. Tabulates all nine with their source artifact and what
makes each one "open", plus the [R]/[A]/[C] outcomes.

Also disambiguates the one genuinely confusing thing: the per-phase
deferred-items.md scanned here is NOT the `## Deferred Items` section the
[A] path writes into STATE.md. Same name, different artifact, opposite
ends of the flow.

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_015TQU48ETJjEmGLJjA6hdQ4

* chore(#2646): backfill changeset pr number

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_015TQU48ETJjEmGLJjA6hdQ4

---------

Co-authored-by: Claude Opus 5 <noreply@anthropic.com>
Co-authored-by: Tom Boucher <trekkie@nomorestars.com>
2026-08-01 21:27:33 -04:00
Tom Boucher
9a76ca6783 fix(#1882): distinguish unterminated frontmatter from absent frontmatter (#2712)
* fix(#1882): distinguish unterminated frontmatter from absent frontmatter

extractFrontmatter returned {} both for a document with no frontmatter and for
one whose fence was opened and never closed, so a file truncated mid-write was
byte-identical to a legitimate no-metadata file. Verified live through
`gsd-tools frontmatter get`: both printed {} with exit 0 and nothing on stderr.

Per ADR-1411's "corrupt is not absent" amendment the {} return is preserved
exactly -- no caller may break -- and the cause is surfaced out-of-band as a
deduplicated, unconditional stderr diagnostic. That mechanism lands as a shared
leaf module rather than a per-site copy because three sibling findings in the
same epic need it identically; four hand-rolled copies of one behaviour is the
generative-fix-divergence defect class.

The discriminator is deliberately not "opened but never closed". A Markdown
document whose first line is a thematic break takes that exact branch, so
flagging on the missing fence alone reports corruption on good Markdown -- the
failure mode this class of check has shipped with before. The unterminated
region is instead run through extractFrontmatter's own parser (extracted as
parseYamlRegion so the probe and the real parse can never diverge) and reported
only when it yields at least one key.

Also folds an inline defect found while working: src/config-loader.cts carried
two NUL bytes in the JSDoc added by this epic's Phase 1 (3eb1cede2), making it
the only non-text file under src. file(1) reported it as data and text tools
silently skipped it, defeating the audit rule that says to search the authored
source; tsc passed because the bytes sat inside a comment, so no gate caught it.
It is live on next.

Refs #1879

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>

* test(#1882): pin unterminated-frontmatter detection and its negative space

Covers the discriminator on both sides. The positive rows are the issue's own
repro (LF and CRLF) plus the key-count boundary 0/1/2 around the ">= 1 parsed
key" threshold. The negative rows are the documents that reach the same branch
and must stay silent -- above all a Markdown thematic break at byte 0, which is
how this class of check has previously shipped a false positive on valid
Markdown.

Deduplication is tested on both halves of the composite key: a repeat of the
same (path, cause) is suppressed, a genuine second failure in a different file
is not, and a Windows and POSIX spelling of one path resolve to a single key.
The reset seam is asserted to actually clear -- #2674 is the precedent where a
reset that silently failed to clear made every later dedup assertion a vacuous
pass, and the cases only passed because each happened to pick an unused key, so
every case here uses a path unique to itself.

Assertions are on typed surfaces throughout -- the frozen reason enum and the
dedup-set size -- never on diagnostic prose. The one CLI-level case asserts a
differential between two runs (whether stderr is empty) rather than matching a
message, and is the wired user-reachable surface for this fix. Stream failure is
injected by overriding process.stderr.write and restoring it, never chmod 0o000,
which root bypasses.

Two properties guard the ~50 call sites of the changed function: the new
optional path argument is inert with respect to the parsed value, and LF/CRLF
spellings of a document still parse identically.

Refs #1879

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>

* fix(#1882): raise the truncation threshold and repair the dedup key

Isolated adversarial review found the one-key discriminator false-positives on
ordinary Markdown: a thematic break above a single labelled line -- `Note:`,
`Author:`, `TODO:`, `See:` -- parses as exactly one key and was reported as
corruption, which is the precise failure the design claimed to prevent and the
changeset promised was fixed. The threshold is now two keys. A file truncated
after exactly one key becomes a false negative; that is the same
precision-over-recall direction already taken at zero keys, and every GSD
artefact this guards carries two or more frontmatter keys.

Three dedup-key defects, each of which could silently swallow a real diagnostic:

- Backslash normalization is removed. A backslash is a legal filename character
  on Linux and macOS, so folding it to a forward slash made two genuinely
  different files share one key. Two spellings of one Windows path may now
  report twice; two distinct files can never silence each other. Lost signal is
  the worse failure.
- The key namespaces are tagged so a file literally named like the unnamed
  digest fallback can no longer collide with a path-less caller whose content
  hashes to that digest -- computable for any predictable content, no brute
  force needed.
- The source identity is computed once rather than hashed twice per emission.

Corrects the previous commit. The two NUL bytes in src/config-loader.cts were
NOT in a JSDoc comment as that message claimed; they were deliberate separators
in the live dedup key, and stripping them degraded it to bare concatenation.
They are restored as escape sequences -- byte-identical runtime string, and the
file is text again so grep can see it. The diagnostic script that misled me
indexed a character-offset string with a byte offset.

Also threads sourcePath through the STATE.md and PLAN.md readers so the two
artefacts epic #1879 is actually about name their file rather than reporting
under a content digest.

Refs #1879

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>

* test(#1882): correct fixtures and assertions left behind by the review fixes

The previous commit changed two behaviours deliberately and the suite still
encoded the old ones, so gsd-test came back red with six failures across both
lanes -- all of them mine.

Fixtures carrying a single frontmatter key no longer clear the two-key
truncation threshold, so the CLI differential and the two path-less dedup cases
were asserting a diagnostic that is now correctly withheld. They now carry two
keys, which is what a real interrupted write of a GSD artefact looks like.

The Windows/POSIX case asserted that two spellings of one path collapse to a
single key -- the exact folding that was removed because it also collapsed
genuinely distinct POSIX files whose names contain a backslash. Inverted to
assert they now report separately, with the reasoning recorded inline so the
trade is not silently reversed later: mild duplicate noise on one Windows path
is acceptable, a swallowed diagnostic is not.

Refs #1879

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>

* fix(#1882): name the file at every read site, and report each file once

The diagnostic reached only the four frontmatter CLI verbs, so ~47 of 53 call
sites reported a truncated file under an anonymous content digest instead of
naming it. Since naming the file is the whole point -- it is what an operator
can act on -- that was a gap in the deliverable, not a scoping choice. 43 of 53
sites now pass the resolved path.

Closing it surfaced a defect the original design missed. A single truncated
STATE.md is parsed twice in a normal run: once by the read wrapper, which holds
the path, and again by a pure core downstream, which is handed only the string
and cannot know it. Those two parses keyed separately, so one file produced two
diagnostics -- and wiring more sites made the collision more likely, not less.
Every emission now registers both identities the input could be known by and
checks both before writing, so whichever caller arrives first speaks and the
other is suppressed. Distinct files with distinct content still report
separately, which is the property ADR-1411 actually requires; two files whose
truncated content is byte-identical collapse to one report, which stays the
documented limit.

Ten call sites deliberately keep no path. Two are frontmatter's own round-trip
checks during set and merge, where passing a path would report on every write.
The other eight are the state-transition pure cores, which ADR-1769 defines as
(content, intent, deps) -> newContent with injected I/O; threading a path
through them would contradict that recorded decision, so it is surfaced rather
than taken unilaterally. With the widened key they no longer double-report, and
in the normal flow the named parse runs first, so the file is still named.

Refs #1879

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>

* fix(#1882): inject the STATE.md path into the transition cores

The six state-transition cores parsed STATE.md frontmatter without knowing
which file it came from, so a truncated STATE.md reached the operator as an
anonymous content digest on exactly the artefact epic #1879 is named for.

ADR-1769 section 3 shapes these as (content, intent, deps) -> newContent with
injected deps, and deps is the seam for precisely this: something the core
cannot derive without doing I/O. It already carries roadmapProvider and a
phase-inventory provider on that basis, each documented as injected rather than
imported so the core stays pure and testable without disk access. A resolved
path is data, not I/O, so an optional sourcePath member extends the established
pattern rather than contradicting it, and every existing stub keeps compiling
because the member is optional.

updateCore and reconcileCurrentPosition take no deps and are left alone. With
the widened dedup key they cannot double-report, and in the normal flow the read
wrapper has already named the file by the time they run.

Also regenerates gsd-core/bin/lib/state-transition.cjs. That artifact is tracked
rather than gitignored, unlike most of its siblings, so leaving it stale would
have shipped a runtime without this change to anyone reading the repo without
building. tsc had skipped the re-emit because its incremental build info still
recorded an emit that had since been reverted, so the stale output survived a
clean build; clearing tsconfig.build.tsbuildinfo forced it. The
compiled-artifact-sync gate is what surfaced the drift and now reports all nine
tracked artifacts matching their source.

Refs #1879

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>

* fix(#1882): stop the widened dedup key from hiding a second file

The previous commit widened the dedup guard so one file parsed twice -- once by
a read wrapper holding the path, once by a pure core holding only the string --
reported once instead of twice. It did that by checking BOTH keys before
emitting, which silently traded one defect for a worse one: two DIFFERENT files
whose truncated content happened to be byte-identical now collided on the shared
content digest, and the second file's diagnostic was swallowed. That is the
over-coarse keying ADR-1411 explicitly forbids, reintroduced while fixing
something else.

The guard now checks only the key matching what the caller actually knows -- a
named read checks its path key, a path-less read checks its digest key -- while
still recording every key the input could later be identified by. The redundant
path-less re-parse of an already-named file stays silent, and two distinct files
always both report.

Verified across all six orderings: same file named-then-anonymous reports once;
two different files with identical content report twice; two different files
with different content report twice; the same path twice reports once; two
path-less parses of identical content report once; two path-less parses of
different content report twice.

The suite caught this -- twenty failures, all in the unusable-input tests that
reuse one truncated fixture across different paths. The local probe written
alongside the broken change did not, because it compared two files with
different content and could therefore only confirm the expected behaviour.

Refs #1879

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>

* test(#1882): count diagnostics emitted, not identities interned

The suite measured the size of the dedup set as a stand-in for "how many
diagnostics were emitted". That held only while one emission recorded exactly
one key. Once an emission began recording every identity the input could later
be matched by -- a path key and a content key for the same file -- the set grew
by two per write and twenty assertions read 2 where they expected 1.

The production behaviour was correct throughout; the proxy was not. Set size
counts identities, which is an implementation detail of the guard. The
behavioural claim these tests exist to make is how many diagnostics an operator
actually saw, so the module now exposes that directly as an emission counter and
the suite asserts on it. The set-size accessor stays for assertions genuinely
about key shape.

The local probe written alongside the change did not catch this because it
counted process.stderr.write calls -- the right thing -- while the suite counted
set growth. Verification now asserts both and requires them to agree, so a
future divergence between the counter and real writes fails immediately rather
than being discovered a bench run later.

Refs #1879

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>

* test(#1882): retire two assertions that outlived the behaviour they described

Both tests encoded assumptions the dedup fix invalidated, and both were caught
by the suite rather than by the probe written alongside the change.

The forged-path case asserted that a file named like the anonymous digest
fallback must not suppress a later path-less report. That premise is gone: an
emission now records every identity its input could be matched by, so ANY named
report of some content silences the anonymous re-parse of that same content --
which is the same-file guard working as intended, and has nothing to do with the
crafted name. The property still worth defending is that a crafted filename can
never silence a real file reported under its own path, so that is what the test
now asserts, with the deliberate suppression documented beside it.

The reset-seam case ended by reading the size of the dedup set and expecting 1.
Set size counts interned identities, not diagnostics written, and one emission
now interns two. It asserts the emission counter for the event and keeps a
weaker set-size check for the interning.

Refs #1879

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>

* fix(#1882): close the review findings on the discriminator, dry-run and counter

Three orthogonal review passes ran against the final diff. Their findings:

A labelled preamble under a leading rule was still misreported. Raising the key
threshold to two only moved the boundary, because two colon-labelled lines are
as common in ordinary prose as one -- a document opening with a rule over an
Author and a Reviewed-by line, then prose, was called corrupt. Key count alone
cannot separate the two. What does is what follows: a write interrupted part way
through a frontmatter block ends mid-block, so every line of the region is still
frontmatter-shaped, whereas a document merely opening with a rule goes on to
prose. Both conditions are now required, and each closes a false-positive class
the other leaves open. Nested list values and indented continuations stay
frontmatter-shaped, so legitimate truncations are unaffected.

`state rebuild --dry-run` reported a truncated STATE.md anonymously. The write
path is named only because readModifyWriteStateMd parses with the path first;
the dry-run branch reads the file directly and never did. Dry-run is the
read-only mode an operator reaches for first when they suspect corruption, so it
is the one that most needed to name the file. reconcileCurrentPosition takes the
path as an optional argument now and rebuildCore passes it down. That function
was previously left alone on the grounds that a read wrapper always names the
file first -- this is the flow that disproves it.

The emission counter counted write attempts rather than writes, so on a broken
stderr it claimed a diagnostic had reached the operator when nothing had. It is
incremented only after a write that completed, and the broken-stderr test now
asserts the count as well as the return value.

Two documentation defects. The module described a guarantee it does not keep:
one file yields one diagnostic only when the named read comes first. The reverse
ordering emits twice, and that is deliberate -- a path-less caller cannot
identify its file, so suppressing the later named report would also suppress a
genuine second failure in a different file whenever two files share identical
truncated bytes, which ADR-1411 ranks the worse failure. The comment now states
the asymmetric guarantee and a test pins it. Separately, the CONTEXT.md glossary
entry still described backslash normalization that a later commit removed, and
asserted the opposite of what the tests pin; no lint checks prose against code,
so nothing caught it.

Also converts three body-level try/finally blocks to t.after(), per
CONTRIBUTING.md's rule that try/finally belongs only in helpers with no test
context -- the file's own emissionsDuring helper already did this correctly.

Refs #1879

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>

* docs(#1882): tell the operator what the truncated-frontmatter warning means

A user who has just seen the new warning is acting, not studying, so this lands
in the How-To quadrant beside the other "if you see X" branches in
debug-a-failed-execution, not in reference or explanation. It gives them what
the warning means for this run, three steps to restore the file, and the fact
that the warning changes no return value or exit code.

It also states the case that matters more than the warning itself: silence does
not prove the file is intact. GSD says nothing when the partial block carries
fewer than two fields or reads as prose, because a Markdown document opening
with a horizontal rule is indistinguishable from one of those. A reader chasing
missing metadata needs to know not to treat quiet as clean. Why that threshold
exists is explanation and deliberately stays out of a how-to.

Refs #1879

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>

* chore(#1882): backfill changeset pr number to 2712

* test(#1882): constrain each branch of the frontmatter-shape check

CI's mutation gate came in at 61.56 against a threshold of 62, and the surviving
mutants were concentrated in isFrontmatterShaped -- the function added last, in
response to review, and the only one never given tests of its own. It was
exercised solely through extractFrontmatter, which covers the composite decision
but leaves each branch of the predicate unconstrained: drop the blank-line
filter, or any one of the three shape alternatives, and every existing assertion
still passed.

Four cases now pin the halves independently. A blank line inside an interrupted
block must not disqualify it, which constrains the filter and its comparison. An
unindented list item and an indented folded-scalar continuation each exercise one
shape alternative that no other case reaches on its own -- the folded line is
neither a key nor a list item, so it is the only input that distinguishes the
indented branch. And two keys followed by prose must stay silent, which is the
negative half: it fails if the predicate is ever mutated to accept everything,
and it is the case that proves key count alone was never sufficient.

Refs #1879

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>

* test(#1882): register the unusable-input suite with the frontmatter mutation shard

The mutation gate reported an identical 61.56 across two runs whose only
difference was four added tests. That is the tell: the tests were never
executed. The frontmatter shard runs a fixed file list in stryker.config.mjs and
scripts/mutation-matrix.cjs, and tests/unusable-input.test.cjs was in neither, so
the entire suite covering the new unterminated-fence branch was invisible to the
gate while passing perfectly well in the normal run.

So the score was not measuring weak tests, it was measuring absent ones: #1882
added mutants to frontmatter.cjs and no test in the shard covered them. Both
lists gain the file; the config already notes they must stay in sync.

This is a registration ripple a new test file carries when it covers a
mutation-tracked module, alongside the .gitignore, eslint, inventory, glossary
and size-baseline ripples a new module carries. Nothing warned about it, which
is why two runs were spent before the identical score gave it away.

Refs #1879

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 5 <noreply@anthropic.com>
2026-07-27 16:50:12 -04:00
Tom Boucher
c1885df9e5 chore(#2143): prohibition-with-teeth + migrate remaining ad-hoc table sites — Phase 4 (final) (#2253)
* chore(#2143): prohibition-with-teeth + migrate remaining table sites — Phase 4

Phase 4 of epic #2143 (ADR-2143 §7). Completes the markdown table/mutation
consolidation by (a) giving the ad-hoc-parsing prohibition teeth and (b)
migrating the last ad-hoc table sites onto the shared seam.

- src/markdown-table.cts: new formatting-preserving `updateTableCell` primitive
  (self-contained, ragged-row-tolerant header/delimiter/cell-range scan; splices
  only the target cell's raw span, preserving all other bytes incl. padding/CRLF;
  no-op-preserves-padding when a transformer returns the current value). Exports
  splitTableRow/isDelimiterRow/findTableStartOffset for tolerant reuse.
- eslint-rules/no-adhoc-markdown-parsing.cjs: TABLE-REGEX detector extended to
  `new RegExp(<literal|static-template>)`; new `.replace()`-mutation detector for
  roadmap/state/content receivers with a table/section-shaped pattern.
- scripts/lint-table-schema-drift.cjs (wired into lint:ci): fails if a TABLE_SCHEMA
  header drifts from its authored table; tests import its logic (single source).
- Migrated onto the seam (behaviour-preserving vs pre-Phase-4 HEAD, verified
  byte-diff old-vs-new): roadmap.cts cmdRoadmapUpdatePlanProgress, phase.cts
  cmdPhaseComplete + traceability, milestone.cts cmdRequirementsMarkComplete,
  uat.cts read path, state.cts metrics/decisions/By-Phase.
- Incidental correctness gains from the migration: a decoy table can no longer
  swallow a phase-progress update (## Progress scoping); a ragged neighbouring
  row no longer silently aborts an edit; completing integer phase N no longer
  touches a decimal sub-phase N.x row; record-metric no longer drops trailing
  section content or duplicates the ## Performance Metrics section.
- Kept justified allow-adhoc-markdown markers only where genuinely not a table
  (security.cts <|role|> token) or a loose non-GFM section (uat human-verify).

Two orthogonal isolated reviews (correctness/adversarial + security) passed;
correctness found 4 behaviour regressions in the first migration pass, all fixed
and re-verified byte-identical-or-better vs OLD.

Surfaced for maintainer (pre-existing, ambiguous domain logic, NOT changed here):
templates/state.md places a By-Phase table under ## Performance Metrics while
cmdStateRecordMetric assumes a Plan|Duration|Tasks|Files table.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#2143): match traceability row by first-cell value, not Requirement header

Phase 4's migration matched the REQUIREMENTS.md traceability row by a column
literally named `Requirement` (`row['Requirement']`), but real tables head that
column `REQ-ID`. The by-name lookup found nothing, so `phase complete` and
`requirements mark-complete` left the Status cell `Pending` (regressed #2769 /
#2203, caught by gsd-test — 8 failures, both node 22/24).

- src/phase.cts, src/milestone.cts: match the row by its FIRST cell's value
  (the requirement-ID column) regardless of that column's HEADER name, via
  `Object.values(row)[0]` (updateTableCell builds the record in header order).
  This mirrors OLD's first-cell `\|\s*<id>\s*\|` anchor, restoring header-name
  independence while keeping the seam.
- src/milestone.cts hasTable: broadened from `Requirement`-only to also
  recognize `Requirement ID` / `REQ-ID` / `REQ ID` headers, kept in sync with
  the now-positional rowMatch/hasRow so a REQ-ID-headed table participates in
  the ADR-2143 §6 write-set and the #2140 table_unmatched drift check (it was
  silently omitted before — a checkbox-only partial reconcile against a REQ-ID
  table could report as fully reconciled). The `Requirement`-headed path is
  byte-identical to OLD.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* test(#2143): replace stale structural milestone guards with behavioural suite

The `milestone.cjs regex global state fix` block was a source-structure guard
(allow-test-rule: structural-regression-guard) — it readFileSync'd the compiled
milestone.cjs and asserted removed regex idioms (`tablePattern.test`,
`afterTable !== reqContent`, `doneTable = new RegExp(...)`). Phase 4's migration
deleted those regexes (table update is now updateTableCell), making the
assertions obsolete. Per the Test Cleanup rule, replace them in-PR with a
behavioural suite driving the compiled CLI:

- multi-ID mark-complete flips all IDs (guards the lastIndex/global-state class),
- Pending->Complete flip under both `REQ-ID` and `Requirement` headers (#2769),
- idempotent already_complete detection with no corruption,
- REQ-ID-headed table participates in write_set (traceability entry, applied),
- REQ-ID-headed table trips #2140 table_unmatched drift on a missing row.

Pruned the now-nonexistent structural-regression-guard entry from the
lint-allow-test-rule-refs allowlist (the source-text-is-the-product entry for
the same file remains valid).

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* chore(changeset): backfill PR number 2253

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#2143): record-metric targets its own metrics table, not By-Phase velocity

`state record-metric` appended its per-plan row (`| Phase 1 P1 | 5min | 3 tasks |
4 files |`) into the FIRST table under `## Performance Metrics` — which on a real
template-derived STATE.md is the By-Phase velocity table `| Phase | Plans | Total
| Avg/Plan |`, polluting it on EVERY plan completion (execute-plan.md:414 is a
per-plan call). The command's own metrics table is `| Plan | Duration | Tasks |
Files |`, which the template does not ship, so the row never reached it; the
scaffold branch also emitted a wrong `| Phase | Plan | Duration | Notes |` header
matching neither the row nor the canonical table.

Pre-existing (predates Phase 4); surfaced while migrating this site and fixed here
per no-defer, on the user's explicit go-ahead.

- src/state.cts cmdStateRecordMetric: locate the metrics table by its own header
  shape (`Plan|Duration|Tasks|Files`, via splitTableRow/isDelimiterRow) rather
  than "first table in the section". When the section exists but has no metrics
  table (only the By-Phase table), self-heal by appending a fresh **Per-Plan
  Metrics:** table to the END of the section body — By-Phase table, Recent Trend
  and footer preserved verbatim, no duplicate `## Performance Metrics` heading,
  created stays false. Absent-section scaffold header corrected to the canonical
  `| Plan | Duration | Tasks | Files |`. Ragged-tolerance + None-yet preserved.
- Not touching templates/state.md (golden-install-parity hashed) — record-metric
  self-creates the table on first use instead.

Failing-first regression test (tests/state.test.cjs) demonstrates the By-Phase
pollution on the pre-fix build, then green after. Verified: no pollution, self-
heal idempotency, both-tables isolation, content/heading preservation, flags,
None-yet, corrected scaffold header (23-check adversarial harness + all existing
record-metric scenarios).

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* feat(#2143): deleteSection seam primitive (level-bounded whole-section removal)

ADR-2143 §4 shipped withSection/collectSection (replace a section BODY) but no
way to DELETE a section (heading + body). Phase 4 suppressed the phase-remove
section delete instead of building it. deleteSection(content, predicate, opts)
locates the section via the collectSection machinery and splices out from the
heading's start offset to the next same-or-higher-level heading — so a level-3
`### Phase N` delete stops at a following level-2 `## Progress`, never past it.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#2143): phase remove no longer deletes ## Progress on last-phase removal

updateRoadmapAfterPhaseRemoval deleted a `### Phase N` detail section with a
greedy raw regex whose lazy scan, on the LAST phase, ran to EOF and destroyed
the following `## Progress` heading and its entire tracking table — silent data
loss, uncovered by tests (removal tests only exercised a middle phase). Migrated
onto the new deleteSection seam (level-bounded, stops at `## Progress`); dropped
the allow-adhoc-markdown SECTION-DELETION suppression. Failing-first regression
(tests/phase.test.cjs) removes the LAST phase and asserts the ## Progress heading
+ table survive; middle-phase removal is byte-identical.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* feat(#2143): deleteTableRow seam primitive (row removal, ragged-tolerant)

Sibling of updateTableCell: locates the first GFM table, matches a DATA row by
predicate (ragged-tolerant record build, header order), and splices out that
row's whole line preserving every other byte. Returns {ok:false,reason} on no
table / no match. Enables migrating the phase-remove Progress-table row delete
off its ad-hoc regex (ADR-2143 §7 — the "future row-delete seam" Phase 4 punted).

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#2143): phase remove deletes the Progress row via deleteTableRow

The Progress-table row delete used a whole-document regex with two defects:
(a) `\.?\s` required whitespace after the phase number, so a COMPACT row
`|2|Beta|` was never deleted (stale row left behind); (b) unscoped — it could
strike a row in a different table (e.g. an earlier `| Phase | Requirements |`
table). Migrated onto deleteTableRow, scoped to the `## Progress` section
(mirrors deriveProgressFromRoadmap), matching the row by first-cell phase number
(integer zero-pad-insensitive; decimal exact; removing `2` never touches `2.5`).
Both allow-adhoc-markdown suppressions removed. New behavioural tests: compact
unpadded row deleted; padded byte-parity on the surviving rows (their ordinal
correctly renumbers via the pre-existing renumber block).

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#2143): deleteTableRow leaves no dangling newline on last EOL-less row

Deleting the final row of a table with no trailing EOL sliced from the row's
start to end-of-string, stranding the newline that terminated the previous line.
Back rowStart over the preceding \r?\n in that branch so the table ends cleanly.
(Caught by the primitive's own unit test on gsd-test; local scenario checks
missed the no-trailing-EOL edge.)

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#2143): migrate read-only section-collects onto collectSection

Six hand-rolled `## Section` read-extract regexes replaced by the collectSection
seam (behaviour-preserving; extracted bodies feed the same downstream parsers):
state.cts matchSessionSection (## Session / ## Session Continuity) + ## Blockers,
smart-entry.cts ## Blockers, audit.cts ## Current Focus + ## Open Questions.
Removes 6 allow-adhoc-markdown "pending #1372" suppressions. Incidental fix: the
old Session regex `## Session[ \t]*\n` silently failed on a CRLF `## Session\r\n`
heading (Windows STATE.md), nulling all session fields; collectSection is
CRLF-safe, so session state now resolves on Windows.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#2143): fence-safe state-transition section writes + dedup stripFrontmatter

- milestoneCompleteCore's `## Current Position` and `## Operator Next Steps`
  section resets used fence-blind raw regexes that a fenced `##` inside the body
  could truncate/mis-target (#2130/#2067/#2080 class). Migrated onto a
  fence-aware tokenizeHeadings-based helper (resetSectionVerbatim) that is
  byte-identical to the old output on the canonical path (9/9 fixtures) and
  correctly ignores a fenced fake heading (proven robustness gain).
- mutateCurrentPositionFirstTime: hand-rolled locate+splice → collectSection +
  replaceSection (byte-parity).
- stripFrontmatter was inlined byte-identically in state.cts AND
  state-transition.cts; hoisted the single canonical copy into frontmatter.cts
  (both call sites now import it) + unit tests — eliminates the divergence risk
  per CLAUDE.md "Generative Fix Divergence". Removes 3 allow-adhoc-markdown /
  #1372 markers.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#2143): name-address By-Phase sum + uat parse, eslint recall hole, catches

- state.cts By-Phase "Total plans completed" sum: positional 2nd-cell regex →
  name-addressed splitTableRow read (correct on a reordered header, where the
  old code silently summed the wrong column). Marker removed.
- uat.cts parseVerificationItems: loose pipe regex → splitTableRow within the
  existing table/numbered/bullet union scan (item list byte-identical; does NOT
  reintroduce the reverted strict-parseMarkdownTable item-drop). Marker removed.
- eslint no-adhoc-markdown-parsing: close the `new RegExp(identifier)` recall
  hole — resolve a const-declared table-shaped regex identifier (mirrors the
  .replace() detector) + RuleTester cases; param/call args stay out (boundary).
- commands.cts: delete a lying comment that claimed the scaffold date "stays on
  raw UTC / deferred" — #2136 already moved it to realClock.localToday().
- Empty catches (classified, not blind-swept): removed 4 dead try/catch;
  fixed 3 error-hiding (phase-insert decimal-dir I/O collision now fails loud;
  phase-remove rename partial-failure surfaced; milestone-archive true count via
  finally); left best-effort swallows with justification comments.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#2143): extractFencedBlock seam + migrate api-coverage named fence

parseCoverageMatrix extracted its ```coverage fenced block with an ad-hoc regex
(the last real allow-adhoc-markdown suppression). Added extractFencedBlock to the
markdown-sectionizer seam (reuses stripFencedCode's CommonMark fence engine —
info-string match, ~~~/backtick, nesting, indent) and migrated onto it; byte-
parity on the parsed CoverageMatrix across 8 fixtures. Only security.cts:367
(a genuine `<|role|>` protocol-token false-positive, not a GFM table) remains
marked in src/ — the "prohibition with teeth" goal (nothing grandfathered but a
true FP) is met.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#2143): By-Phase row insert is name-addressed (insertTableRow seam)

updatePerformanceMetricsSection's INSERT-new-row branch located the By-Phase
table with a canonical-column-order-only regex + a hardcoded positional row
literal, so on a reordered header it silently inserted nothing — inconsistent
with the now name-addressed UPDATE and SUM halves of the same function. Added
insertTableRow (markdown-table seam sibling of updateTableCell/deleteTableRow:
name-addressed, header-order-agnostic, EOL-preserving) and migrated the branch
onto it, mapping By-Phase values by column NAME. Canonical-order output is
byte-identical; a reordered header now inserts a correctly-mapped row; a
pre-existing CRLF mixed-EOL splice glitch is incidentally fixed. Retired the
now-dead byPhaseTablePattern const.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#2143): phase-list checkbox flip via updateBullet seam

Added updateBullet (markdown-sectionizer): a fence-aware, offset-tracked
single-bullet write primitive (GFM 1–4-space marker tolerance) — the write
counterpart to read-only iterateBullets. Migrated mutateMilestonePhase's
phase-list checkbox flip (`- [ ] Phase N …` → `- [x] … (completed <date>)`)
off its whole-slice regex onto it, same milestone-slice scope + clock seam.
Byte-identical across simple / idempotent / metachar-title / double-space /
CRLF scenarios.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#2143): scope the Progress-ordinal renumber to ## Progress via seam

phase remove's integer-renumber decremented Progress-table phase ordinals with a
whole-document `content.replace(/(\|\s*)(\d+)(\.\s)/g, …)` — unscoped, so it also
rewrote any `| N. …` cell in an unrelated/decoy table (same class as the batch-2
row-delete scoping bug). Migrated onto updateTableCell, scoped to the ## Progress
section, decrementing each affected row's leading phase ordinal by column name.
Byte-identical on canonical Progress tables + multi-row + decimal-sibling cases;
a decoy `| 3. … |` row before ## Progress is now correctly left untouched. The
sibling heading / checkbox-bullet / PLAN.md-filename / Depends-on-prose renumbers
are not GFM-table mutations (outside ADR-2143's table/section mandate) — left as-is.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#2143): review fixes — scope traceability write, restore Current Position H3-stop

Adversarial review of the remediation (BLOCK verdict) — all 9 findings fixed:
- F1 (BLOCKER): requirements mark-complete / phase complete flipped the checkbox
  but NOT the traceability row on the shipped template, because updateTableCell
  bound to the FIRST table (## Out of Scope, no Status column) instead of the
  ## Traceability table — the #2140 silent-divergence class, re-introduced by the
  seam migration and missed by tests (fixtures had Traceability first). Scoped
  the write + hasRow probe to the ## Traceability section slice (updateTraceability
  Cell helper) in milestone.cts + phase.cts. Failing-first tests on the
  Out-of-Scope-before-Traceability layout; the #2769 first-cell match preserved.
- F2 (MAJOR): mutateCurrentPositionFirstTime restored to locateCurrentPosition
  (STOP_H2_PLUS) — collectSection's default H2-stop swallowed a level-3 subsection
  and the field regexes clobbered it (#2130 class).
- F3/F8: Progress-ordinal renumber re-escapes via escapeCell + keys padding
  recovery by row index (was de-escaping `\|` and losing padding on dup values).
- F4: insertTableRow escapes cell values internally.
- F5: updateBullet accepts a tab after the marker (`[ \t]{1,4}`).
- F7: resetSectionVerbatim consumes CRLF blank lines (byte-parity on CRLF).
- F6/F9: corrected two misleading comments.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* chore(changeset): data-loss + CRLF-session user-facing fixes (#2253)

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* test(#2143): de-flake the G10 windsurf ReDoS-guard wall-clock assertion

The G10 test asserted `elapsedMs < 1000` for a 200k-char payload — a wall-clock
assertion (CLAUDE.md: never assert on wall-clock time) that flaked on a loaded
node24 bench at ~1.1s. It was redundant: runHook's spawnSync `timeout: 10000`
already SIGKILLs a catastrophic-backtracking hook, so the exit-0 assertion is the
real ReDoS guard. Removed the timing assertion; kept exit-0 + documented the
subprocess-timeout mechanism. Surfaced (not caused) by this branch's gsd-test
runs loading the bench; unrelated to the markdown-parsing changes but fixed in
place per the no-flaky-tests rule.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>
2026-07-14 14:25:44 -04:00
Tom Boucher
e2eaa5b046 fix(#2128): address review — migrate 9 mis-allowlisted sites, harden scanner + guards
Correctness review of the Phase 4 guard found the allowlist over-broad and the
scanner/guards evadable. Fixed all findings:

- Migrate 9 sites that were wrongly sanctioned: their regex is the PURE canonical
  token (`\d+[A-Z]?(?:\.\d+)*`, no variant), byte-identical to already-migrated
  siblings. The old justification argued against swapping to the extractPhaseToken()
  FUNCTION (behavior-risky) — but the guard only wants the same regex built from
  the SOURCE string (byte-equal, zero risk). Coverage is now 32 migrated / 5
  sanctioned, not the overstated 23 / 14 (audit.cts x3, uat.cts, init.cts x4,
  roadmap-upgrade.cts). Each conversion proven byte-equal (.source + .flags).
- Harden the drift detector: also catch the `[0-9]`-in-place-of-`\d` variant;
  document the accepted limits (cross-line split, semantic restructuring —
  covered by the identity guard + review, not a text scan).
- Sanction robustness: a `phase-id-owner:` marker now counts only inside a `//`
  comment (a bare substring in a string no longer suppresses a real flag), and
  the preceding-line window skips blank lines (an auto-formatter's blank line no
  longer reactivates the flag).
- roadmap-parser.cts:462 comment: corrected — that regex carries no /i flag, so
  its [A-Za-z] class does real case work (matches state.cts:1409's rationale).
- Identity guard: surface require failures instead of silently skipping, and
  floor coverage at >75% of consumer modules (inspects 156/157).

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
2026-07-10 09:14:15 -04:00
Tom Boucher
dfad3a7510 refactor(#2128): single-source 23 phase-token re-derivations; sanction 14 context-specific sites
Route 23 literal re-derivations of the canonical phase-number token through
phase-id.cjs `PHASE_NUMBER_TOKEN_SOURCE` (via new RegExp). Each conversion was
proven BYTE-IDENTICAL (old.source === new.source && old.flags === new.flags), so
the runtime regexes are unchanged — zero behavior change by construction.

The remaining 14 phase-token sites are genuine but context-specific and stay
literal with a `// phase-id-owner: <reason>` sanction: dir-name parses whose
dash-continuation semantics differ from extractPhaseToken, and the [A-Za-z]
case-variant / [.-] dot-or-dash separator forms that are not source-byte-equal
to the canonical token.

Scanner (`npm run check:phase-id-drift`) is now green.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
2026-07-10 08:49:36 -04:00
Tom Boucher
666d933e16 ci(#1401): add no-adhoc-markdown-parsing rule (fence-strip + section-collect) + grandfather burn-down (#1402)
Tightens the over-broad heading-walk detection: removes heading-walk
entirely and narrows fence-regex to require a multiline body ([\s\S]),
so single-line tests like /^```/ and /^###\s+/ are no longer flagged.
Grandfathers the 10 genuine section-collect sites across state.cts,
milestone.cts, audit.cts, and phase-lifecycle.cts with concrete reasons.
Adds 12 RuleTester tests (3 positive, 9 negative) to eslint-rules.test.cjs.

Co-authored-by: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-06-17 20:14:12 -04:00
Tom Boucher
df04aae5e4 enhancement(#537): migrate all hand-written bin/lib/*.cjs to TypeScript source of truth (ADR-457) (#602)
* enhancement(#537): migrate code-review-flags to TS source of truth

Collapse the hand-written get-shit-done/bin/lib/code-review-flags.cjs to a
TypeScript source of truth (src/code-review-flags.cts), compiled by tsc to a
gitignored .cjs build artifact at the same path, per ADR-457 (build-at-publish).
Second module after the semver-compare pilot (#541).

Behaviour is preserved byte-for-behaviour (characterization test added in
tests/code-review-flags.test.cjs locks the parser quirks). Adds compile-time
type checking: CodeReviewFlags interface + CodeReviewWorkflow literal union.
The require() path is unchanged, so code-review.md and the bug-3727 test keep
working. The emitted .cjs is gitignored and eslint-ignored, mirroring the pilot.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* enhancement(#537): migrate 9 leaf bin/lib modules to TS source of truth

ADR-457 build-at-publish, batch 1 (pure leaf modules, 0 sibling-deps):
001-legacy-orphan-files, context-utilization, redaction, artifacts,
command-arg-projection, clock, ui-safety-gate, review-reviewer-selection,
clusters. Each moves to src/*.cts (strict TS, typed), compiled by tsc to a
gitignored .cjs at the same require() path; behaviour preserved byte-for-
behaviour. Adds src/node-globals.d.ts (minimal ambient shim; "types":[]).

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* chore(#537): add @types/node, drop hand-rolled node-globals shim

ADR-457 migration infra: replace the temporary src/node-globals.d.ts ambient
shim with @types/node@22 + "types":["node"] in tsconfig.build.json. Unblocks
migrating the ~49 remaining bin/lib modules that use node:fs/path/os/
child_process. Build + full suite (3030 pass) + lint all green; no .cts type
changes were needed (real Node types matched the shim).

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* enhancement(#537): migrate 9 more bin/lib modules to TS (batch 2)

ADR-457 build-at-publish. Clean leaves: installer-migration-report,
prompt-budget. Type-error-prone leaves (were tsconfig.lint-excluded; now
strict-typed and removed from that exclude list): secrets, phase-lifecycle,
workstream-name-policy, decisions, validate, schema-detect. Plus
runtime-name-policy. Strict type fixes narrow unknown->concrete domain types
(no any/ts-ignore); behaviour preserved. Full suite green, lint 0 errors.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* enhancement(#537): migrate runtime-slash to TS (cross-import proof)

ADR-457. First cross-module TS->TS import: src/runtime-slash.cts imports
./runtime-name-policy.cjs and tsc resolves the sibling .cts types under strict
(no declaration files; NodeNext .cjs->.cts mapping), emitting a correct
require("./runtime-name-policy.cjs"). Confirms the recipe for coupled modules,
which must be migrated in dependency order (leaves-up). Suite green, lint clean.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* enhancement(#537): migrate 10 more bin/lib modules to TS (batch 3)

ADR-457 build-at-publish, Wave-1 leaves: event, workstream-inventory-builder,
plan-scan, fallow-runner, project-root, installer-migration-authoring,
update-context, 000-first-time-baseline, runtime-homes, model-catalog. Strict
typing fixed real issues (narrowing unknown, qualified fs/path calls, removed
unnecessary casts); plan-scan/project-root/workstream-inventory-builder dropped
from tsconfig.lint exclude. Behaviour preserved; suite green, lint 0 errors.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* enhancement(#537): migrate 5 large Wave-1 leaves to TS (batch 4)

ADR-457 build-at-publish: configuration, state-document, shell-command-
projection (42 dependents), security, command-aliases. shell-command-
projection keeps a namespace child_process import for mock-intercept
testability. loadConfig/migrateOnDisk emit synchronously (every caller uses
them sync; the one awaited migrateOnDisk caller tolerates a non-Promise) —
full suite (3030 pass) confirms behaviour preserved. configuration/
state-document/command-aliases dropped from tsconfig.lint exclude. Also fixes
the malformed batch-3 changeset frontmatter (type/pr) that failed lint:docs.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* enhancement(#537): migrate 6 Wave-2 modules to TS (batch 5)

ADR-457 build-at-publish: config-schema, model-profiles,
002-codex-legacy-hooks-json, logger, active-workstream-store, adr-parser.
First batch importing already-migrated siblings (configuration, model-catalog,
shell-command-projection, redaction, security) via ./sibling.cjs specifiers.
Strict type narrowing (typeof guards over String(unknown)); behaviour
preserved; suite 3030 pass, lint 0 errors.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* enhancement(#537): migrate 5 large Wave-2 modules to TS (batch 6)

ADR-457 build-at-publish: graphify, install-profiles, intel,
installer-migrations, worktree-safety. installer-migrations preserves its
dynamic require() loader for numbered migration modules (scoped lint
suppressions). Strict typing (typeof guards over String(unknown)); behaviour
preserved; suite 3030 pass, lint 0 errors. Wave 2 complete.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* enhancement(#537): migrate Wave-3 modules to TS (batch 7)

ADR-457 build-at-publish: planning-workspace, runtime-artifact-layout,
command-routing-hub, drift. Uses `import x = require()` for export= siblings;
drift's lazy require of runtime-slash hoisted to a top-level import (verified
non-circular). Behaviour preserved; suite 3030 pass, lint 0 errors.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* enhancement(#537): migrate small Wave-4 modules to TS (batch 8)

ADR-457 build-at-publish: cjs-command-router-adapter, phase-command-router,
surface, roadmap-upgrade. Typed the hub router handler results as the HubResult
discriminated union; surface drops 4 genuinely-unused imports. Behaviour
preserved; suite 3030 pass, lint 0 errors.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* enhancement(#537): migrate core hub (2.5k LOC, 68 dependents) to TS (batch 9)

ADR-457 build-at-publish: get-shit-done/bin/lib/core.cjs -> src/core.cts,
preserving all 63 exports via export=. All sibling deps already migrated
(shell-command-projection, model-profiles, model-catalog, worktree-safety,
planning-workspace, project-root, configuration, config-schema). Strict types,
no any/ts-ignore; config-schema lazy require hoisted (non-circular). Behaviour
preserved (independently verified: core's shard 3030 pass / 0 fail).

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* test(#537): make ESLint-coverage + test-sprawl checks migration-aware

#551 test hardcoded 12 now-migrated modules as "hand-written, must be linted";
that invariant is obsoleted by the ADR-457 migration. Rewrite it to a
filesystem-driven invariant that holds at every stage: a bin/lib/*.cjs must be
eslint-ignored IFF it has a src/*.cts source (tsc-generated), else linted
(covers package-identity, which has no TS source). Also eslint-ignore
config-types.cjs (has a src counterpart) and drop the redundant
tests/clock.test.cjs (clock already covered by clock-seam + bug-474 tests),
which tripped the lint-test-file-count ratchet.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* enhancement(#537): migrate 9 Wave-5 router/inventory modules to TS (batch 10)

ADR-457 build-at-publish: phases/verify/init/agent/task/validate/roadmap/state
command routers + workstream-inventory. Router handler results typed against
core's exported shapes; behaviour preserved (caught+fixed a --verify boolean
flag regression mid-migration). Full suite green across all shards (only the 4
local gpg-env changeset-notes failures remain; CI passes them).

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* enhancement(#537): migrate 7 Wave-5 modules to TS (batch 11)

ADR-457 build-at-publish: gap-checker, docs, check-command-router, frontmatter,
learnings, gsd2-import, profile-pipeline. Behaviour preserved; full suite green
across all shards (only the 4 local gpg-env failures remain). Also broadens
atomic-write-coverage.test.cjs to accept the tsc-compiled namespace-import form
while still asserting platformWriteSync is called (safety guard intact).

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* enhancement(#537): migrate config + profile-output to TS (batch 12)

ADR-457 build-at-publish: config (729 LOC), profile-output (1142 LOC). All
exports preserved; cmdMigrateConfig de-asynced (migrateOnDisk is sync, awaited
caller tolerates it). Behaviour preserved; suite green across all shards
(only the 4 local gpg-env failures). Wave 5 complete.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* enhancement(#537): migrate 5 Wave-6 modules to TS (batch 13)

ADR-457 build-at-publish: template, uat, workstream, roadmap, audit. Behaviour
preserved (dead toPosixPath import dropped from audit; inline requires hoisted).
Suite green across all shards (only the 4 local gpg-env failures).

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* enhancement(#537): migrate commands + state hubs to TS (batch 14)

ADR-457 build-at-publish: commands (1305 LOC), state (2074 LOC, 17 dependents).
All exports preserved; inner requires kept non-hoisted where load-order matters
(install.js, per-call security); acquireStateLock cast inlined to preserve the
err.code source token a structural test inspects. Behaviour preserved; suite
green across all shards (only the 4 local gpg-env failures). Wave 6 complete.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* enhancement(#537): migrate milestone to TS (batch 15a, hand-authored)

ADR-457 build-at-publish: milestone -> src/milestone.cts. Authored directly
(subagent capacity was unavailable). Also relaxes core.output()'s 3rd param to
optional, matching its real always-optional call contract (unblocks remaining
2-arg output callers). Behaviour preserved; suite green across all shards
(only the 4 local gpg-env failures).

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* enhancement(#537): migrate phase, verify, init to TS (batch 15, final modules)

ADR-457 build-at-publish, Wave 7 (the last hubs): phase (1608 LOC), verify
(1615), init (2113). Adds src/package-identity.d.cts so verify can import the
permanently value-baked package-identity.cjs under strict TS.

Fixes two regressions the migration introduced in verify: restore
cmdValidateHealth's `return result` (callers/tests read result.warnings — it is
NOT side-effect-only), and make the bug-3384 source-pattern test tolerant of the
tsc-compiled bracket-notation form of the git_list_failed->W020 branch (behaviour
intact). Full suite green across all shards (only the 4 local gpg-env failures);
lint 0 errors. All 86 migratable bin/lib modules are now TypeScript sources.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* chore(#537): finalize ADR-457 migration — retire tsconfig.lint.json

All hand-written bin/lib/*.cjs are now src/*.cts sources, so the checkJs
stopgap tsconfig.lint.json (unused; not wired into eslint, scripts, or CI) is
deleted per ADR-457's final step. Also gitignore the tsc-generated
config-types.cjs (was still committed) for consistency with every other
emitted artifact. package-identity.cjs stays value-baked (declared via
src/package-identity.d.cts). Suite green; #551 ESLint-coverage test green.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#537): add prepare script so unpacked/git installs build bin/lib artifacts

ADR-457 build-at-publish: bin/lib/*.cjs are now gitignored, built by tsc. The
prepack/prepublishOnly hooks cover `npm pack`/publish, but `npm install -g
<dir>` and git installs run the `prepare` lifecycle — which was missing — so the
unpacked install shipped without the compiled .cjs and failed at startup with
"Cannot find module './lib/core.cjs'" (caught by the smoke-unpacked CI job).
Add `prepare` mirroring prepublishOnly (build:lib + build:hooks). prepare does
NOT run for registry consumers (they get the pre-built tarball), only for
source/local/pack installs.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#537): make CI build/lockfile checks work with gitignored bin/lib artifacts

ADR-457 build-at-publish exposed two CI assumptions that bin/lib/*.cjs are
always present on disk:
- check:env's lockfile-sync ran `npm ci --dry-run`, which now triggers the
  `prepare` build (tsc) — but it runs before deps are installed, so tsc is
  absent and it misreported the lockfile as out of sync. Add --ignore-scripts
  (a lockfile check must not build).
- the lint-tests job installs with --ignore-scripts (no prepare build), but
  lint:skill-deps require()s the built install-profiles.cjs. Add an explicit
  `npm run build:lib` step after install.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#537): narrow prepare to build:lib only (unbreak packed-smoke pack step)

prepare running build:hooks emitted "✓ Copying ..." stdout during `npm pack`,
which the install-smoke "Pack root tarball" step captures into $GITHUB_OUTPUT —
breaking it with "Invalid format". build:lib (tsc) is silent on success and is
all the unpacked/source install needs (the smoke-unpacked assertions exercise
gsd-tools, i.e. bin/lib, and tolerate hook setup with `|| true`). Matches
prepack. build:hooks still runs on prepublishOnly for real publishes.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(#537): wire Stryker mutation gate to build-at-publish layout

The gate scored 0.00 because it mutated changed bin/lib/*.cjs that (a) were
generated artifacts and (b) included modules with no coverage in the command's
test set. Rework: mutation.yml now derives changed COVERED modules from
src/*.cts and maps them to their built bin/lib/*.cjs; Stryker mutates those
built artifacts with a no-rebuild command (mutating src/*.cts + per-mutant tsc
was ~3x over the 30-min CI budget).

NOTE: with the gate now correctly measuring the covered modules, their actual
mutation score is 42.94% (< break 50) — a pre-existing test-coverage gap
(adr-parser/prompt-budget/etc.), not introduced by this behaviour-preserving
migration. Reaching 50 needs more tests, a threshold/scope change, or a waiver —
a maintainer decision.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* test(#537): raise mutation coverage of covered modules above the 50 gate

Adds focused example-based unit tests that kill surviving mutants in the two
lowest-scoring covered modules:
- tests/prompt-budget.unit.test.cjs (112 tests): 17.9% -> 97.9%
- tests/adr-parser.unit.test.cjs (205 tests): 44.7% -> 89.4%
Both wired into stryker.config.mjs's command. Fresh full run over the 6 covered
modules now scores 82.25% (>= break 50); every covered module is >= 68%.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* enhancement(#537,#609): parallelize mutation gate via dynamic per-module matrix

The serial Stryker run timed out at 30 min once the migration's added tests
made every mutant re-run ~300 tests. Replace it with a dynamic matrix so the
gate completes well under budget — folded into this PR (was tracked as #609)
because it's a prerequisite for this PR's mutation gate to pass.

- scripts/mutation-matrix.cjs: single source of truth (covered-module -> test
  files) computing changed covered modules from git diff -> {has_work, matrix}.
- mutation.yml: detect -> dynamic `matrix: fromJSON(...)` mutate job (one
  parallel shard per changed module, scoped via MUTATION_TEST_CMD to only that
  module's tests, 15-min/shard) -> summary job that KEEPS the legacy check name
  "Stryker mutation score (changed files only)" so branch protection is
  unchanged. Per-shard jobs report as "Stryker (<module>)".
- stryker.config.mjs: commandRunner.command reads MUTATION_TEST_CMD (falls back
  to the full command locally).

Closes #609.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* test(#537,#609): give each mutation shard ≥50% on its own tests; drop blacksmith note

Per-module sharding revealed that active-workstream-store (46.5%) and
frontmatter (7.4%) only cleared 50% in the old serial run via timeout-noise from
the bloated 300-test command; on their own tests they were below the gate. Add
focused unit tests:
- tests/active-workstream-store.unit.test.cjs (115 tests): 46.5% -> 81.9%
- tests/frontmatter.unit.test.cjs (165 tests): 7.4% -> 63.4%
Both wired into scripts/mutation-matrix.cjs (per-module test map) and
stryker.config.mjs DEFAULT_TEST_CMD. All 6 covered modules now clear break:50
with only their own tests (config-schema/context-utilization/prompt-budget/
adr-parser already did). Also removes the leftover blacksmith TODO comment —
GitHub-hosted runners only; speed comes from parallel per-module shards.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* test(#537,#609): strengthen prompt-budget tests to clear the gate on its own tests

prompt-budget scored 39.58% when mutation-tested with ONLY its own tests (the
way the per-module CI shard runs it) — an earlier ~98% reading was inflated by
accidentally running the full multi-module command. Add 96 targeted tests to
tests/prompt-budget.unit.test.cjs (exact note-template text, plan-truncation
arithmetic/percentages, drop-block strings, noteInjected/hardFailed booleans):
scoped score 39.58% -> 68.75% (>= break 50). All 6 covered modules now clear
the gate on their own tests.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>
2026-06-02 11:45:01 -04:00