After v1.39.0 skill consolidation (#2790), skills/ became a GSD-managed
root that the installer wipes on update. GSD_MANAGED_DIRS in gsd-tools.cjs
was missing 'skills', so user-added skill directories (e.g.
skills/custom-skill/SKILL.md) were never walked and silently destroyed
during /gsd-update.
- Add 'skills' to GSD_MANAGED_DIRS so the directory is walked
- Add tests/bug-2942-detect-custom-skills.test.cjs with 5 targeted tests
- Update tests/update-custom-backup.test.cjs: replace the now-incorrect
"skills/ must NOT be scanned" assertion (written pre-#2790) with a test
that verifies custom skills ARE detected and GSD-owned skills are not
falsely flagged
Co-authored-by: Claude Sonnet 4.6 <noreply@anthropic.com>
* fix(detect-custom-files): exclude skills and command dirs not wiped by installer (closes#2505)
GSD_MANAGED_DIRS included 'skills' and 'command' directories, but the
installer never wipes those paths. Users with third-party skills installed
(40+ files, none in GSD's manifest) had every skill flagged as a "custom
file" requiring backup, producing noisy false-positive reports on every
/gsd-update run.
Removes 'skills' and 'command' from both gsd-tools.cjs and the SDK's
detect-custom-files.ts. Adds two regression tests confirming neither
directory is scanned.
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
* fix(settings): warn that model profiles are no-ops on non-Claude runtimes (closes#2506)
settings.md presented Quality/Balanced/Budget model profiles without any
indication that these tiers map to Claude models (Opus/Sonnet/Haiku) and
have no effect on non-Claude runtimes (Codex, Gemini CLI, OpenRouter).
Users on Codex saw the profile chooser as if it would meaningfully select
models, but all agents silently used the runtime default regardless.
Adds a non-Claude runtime note before the profile question (shown in
TEXT_MODE, the path all non-Claude runtimes take) explaining the profiles
are no-ops and directing users to either choose Inherit or configure
model_overrides manually. Also updates the Inherit option description to
explicitly name the runtimes where it is the correct choice.
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
---------
Co-authored-by: Claude Sonnet 4.6 <noreply@anthropic.com>
PR #2038 added detect-custom-files to gsd-tools.cjs and the backup_custom_files
step to update.md, but commit 7bfb11b6 is not an ancestor of v1.36.0: main was
rebuilt after the merge, orphaning the change. Users on 1.36.0 running /gsd-update
silently lose any locally-authored files inside GSD-managed directories.
Root cause: git merge-base 7bfb11b6 HEAD returns aa3e9cf (Cline runtime, PR #2032),
117 commits before the release tag. The "merged" GitHub state reflects the PR merge
event, not reachability from the default branch.
Fix: re-apply the three changes from 7bfb11b6 onto current main:
- Add detect-custom-files subcommand to gsd-tools.cjs (walk managed dirs, compare
against gsd-file-manifest.json keys via path.relative(), return JSON list)
- Add 'detect-custom-files' to SKIP_ROOT_RESOLUTION set
- Restore backup_custom_files step in update.md before run_update
- Restore tests/update-custom-backup.test.cjs (7 tests, all passing)
Closes#2229Closes#1997
Co-authored-by: Claude Sonnet 4.6 <noreply@anthropic.com>
