gen-inventory-manifest.cjs's cli_modules family did a flat readdirSync
of gsd-core/bin/lib/, invisible to anything shipped in a subdirectory.
Found while registering this phase's 8 health-diagnostic-rules/*.cjs
files in docs/INVENTORY.md (Standards-axis review) — the automated
manifest cross-check couldn't see them even though the manual
INVENTORY.md rows were correct.
Adds collectOneLevelSubdirs (mirrors the existing collectNested's
defensive statOrNull style) and merges flat + one-level-subdirectory
results into cli_modules's single sorted array, using the same
<subdir>/<file>.cjs key format INVENTORY.md's rows already use.
Regenerating the manifest surfaced that three OTHER existing
subdirectories (installer-migrations/, host-integration-adapters/,
observability/ — pre-existing, unrelated to this phase) were equally
invisible and had zero docs/INVENTORY.md rows at all. Added all 15
missing rows rather than leave a gap the fix itself just exposed.
Also fixes 3 pre-existing lint-legacy-dir-name violations in the
installer-migrations rows (legitimate references to the historical
get-shit-done -> gsd-core rename these migrations clean up — marked
with the guard's own gsd-allow-legacy-name exemption) and a stale
health-diagnostic.cjs row that still said "RULES ships empty."
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