Tom Boucher 14c3ef5b1f fix(workflow): preserve structural planning commits in gsd-pr-branch (#2031) ...

The previous implementation filtered ALL .planning/-only commits, including
milestone archive commits, STATE.md, ROADMAP.md, and PROJECT.md updates.
Merging the PR branch then left the target with inconsistent planning state.

Fixes by distinguishing two categories of .planning/ commits:
- Structural (STATE.md, ROADMAP.md, MILESTONES.md, PROJECT.md,
  REQUIREMENTS.md, milestones/**): INCLUDED in PR branch
- Transient (phases/, quick/, research/, threads/, todos/, debug/,
  seeds/, codebase/, ui-reviews/): EXCLUDED from PR branch

The git rm in create_pr_branch is now scoped to transient subdirectories
only, so structural files survive cherry-pick into the PR branch.

Adds regression test asserting structural file handling is documented.

Closes #2004

Co-authored-by: Claude Sonnet 4.6 <noreply@anthropic.com>

2026-04-10 11:25:55 -04:00

..

agent-frontmatter.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

agent-install-validation.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

agent-skills.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

ai-evals.test.cjs

feat: /gsd-ai-integration-phase + /gsd-eval-review — AI framework selection and eval coverage layer (#1971)

2026-04-10 10:49:00 -04:00

analyze-dependencies.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

anti-pattern-enforcement.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

antigravity-install.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

atomic-write.test.cjs

fix(core): add atomicWriteFileSync to prevent truncated files on kill (#1943)

2026-04-07 17:27:20 -04:00

audit-fix-command.test.cjs

feat(commands): add /gsd-audit-fix for autonomous audit-to-fix pipeline (#1814)

2026-04-05 23:07:52 -04:00

augment-conversion.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

autonomous-interactive.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

autonomous-to-flag.test.cjs

feat(autonomous): add --to N flag to stop after specific phase (#1646)

2026-04-04 07:58:27 -04:00

autonomous-ui-steps.test.cjs

fix: replace /gsd: slash command format with /gsd- skill format in all user-facing content (#1579)

2026-04-04 07:24:31 -04:00

bug-1736-local-install-commands.test.cjs

fix(installer): deploy commands directory in local installs (#1843)

2026-04-05 23:11:18 -04:00

bug-1754-js-hook-guard.test.cjs

fix(hooks): handle missing reference files gracefully during fresh install (#1878)

2026-04-07 08:13:52 -04:00

bug-1817-sh-hook-guard.test.cjs

fix(installer): guard .sh hook registration with fs.existsSync before writing settings.json (#1823)

2026-04-05 17:49:20 -04:00

bug-1818-unknown-flags.test.cjs

fix(cli): reject help/version flags instead of silently ignoring them (#1822)

2026-04-05 17:32:18 -04:00

bug-1826-phases-clear-confirm.test.cjs

fix(cli): require --confirm flag before phases clear deletes directories (#1832)

2026-04-05 18:05:32 -04:00

bug-1829-inherit-model-profile.test.cjs

fix(core): treat model_profile "inherit" as pass-through instead of falling back to balanced (#1833)

2026-04-05 18:20:11 -04:00

bug-1834-sh-hooks-installed.test.cjs

fix(installer): deploy missing shell hook scripts to hooks directory (#1844)

2026-04-05 23:11:16 -04:00

bug-1891-file-resolution.test.cjs

docs(config): document missing config keys in planning-config.md (#1947)

2026-04-07 17:36:47 -04:00

bug-1906-hook-relative-paths.test.cjs

fix(install): anchor local hook paths to $CLAUDE_PROJECT_DIR (#1906) (#1917)

2026-04-07 17:26:29 -04:00

bug-1908-uninstall-manifest.test.cjs

fix(uninstall): remove gsd-file-manifest.json on uninstall (#1939)

2026-04-07 17:19:10 -04:00

bug-1924-preserve-user-artifacts.test.cjs

fix(installer): preserve USER-PROFILE.md and dev-preferences.md on re-install (#1945)

2026-04-07 17:28:23 -04:00

bug-1962-phase-suffix-case.test.cjs

fix(core): preserve letter suffix case in normalizePhaseName (#1963)

2026-04-10 10:48:00 -04:00

bug-1998-phase-complete-checkbox.test.cjs

fix(phase): update overview bullet checkbox on phase complete (#1998) (#2000)

2026-04-10 10:50:17 -04:00

bug-2002-offer-next-context.test.cjs

fix(workflow): route offer_next based on CONTEXT.md existence for next phase (#2030)

2026-04-10 11:19:32 -04:00

bug-2004-pr-branch-milestone.test.cjs

fix(workflow): preserve structural planning commits in gsd-pr-branch (#2031)

2026-04-10 11:25:55 -04:00

bug-2005-phase-complete-details.test.cjs

fix(phase): update plan count when current milestone is inside <details> (#2005) (#2029)

2026-04-10 11:15:59 -04:00

bug-patterns-reference.test.cjs

feat(references): add common bug patterns checklist for debugger agent (#1780)

2026-04-07 08:13:58 -04:00

bugs-1656-1657.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

chain-flag-plan-phase.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

check-update-config-dir.test.cjs

fix(gsd-check-update): prioritize .claude in detectConfigDir search order (#1863)

2026-04-06 15:14:02 -04:00

claude-md.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

claude-skills-migration.test.cjs

fix(install): apply path replacement in copyCommandsAsClaudeSkills (#1677)

2026-04-04 15:12:58 -04:00

cline-support.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

code-review.test.cjs

feat: add /gsd:code-review and /gsd:code-review-fix commands (#1630)

2026-04-05 19:43:45 -04:00

codebuddy-install.test.cjs

feat: support CodeBuddy runtime (#1887)

2026-04-10 10:46:21 -04:00

codex-config.test.cjs

fix(codex): convert /gsd- workflow commands to $gsd- during installation (#1994)

2026-04-10 10:49:58 -04:00

commands.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

commit-docs-bypass.test.cjs

fix(workflows): respect commit_docs:false in worktree merge and quick task commits (#1802)

2026-04-05 17:02:20 -04:00

commit-files-deletion.test.cjs

fix(commit): skip staging deletions for missing files when --files is explicit (#2014) (#2025)

2026-04-10 10:56:09 -04:00

concurrency-safety.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

config-field-docs.test.cjs

feat: /gsd-ai-integration-phase + /gsd-eval-review — AI framework selection and eval coverage layer (#1971)

2026-04-10 10:49:00 -04:00

config-get-default.test.cjs

feat(config): add --default flag to config-get for graceful absent-key handling (#1893) (#1920)

2026-04-07 17:25:11 -04:00

config.test.cjs

feat(config): add execution context profiles for mode-specific agent output (#1827)

2026-04-05 19:09:19 -04:00

context-enrichment.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

copilot-install.test.cjs

feat: /gsd-ai-integration-phase + /gsd-eval-review — AI framework selection and eval coverage layer (#1971)

2026-04-10 10:49:00 -04:00

core.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

cursor-conversion.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

defaults-json-fallback.test.cjs

feat(config): apply ~/.gsd/defaults.json as fallback for pre-project commands (#1738)

2026-04-05 09:15:41 -04:00

discuss-checkpoint.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

discuss-mode.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

discuss-phase-power.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

dispatcher.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

docs-update.test.cjs

feat: add /gsd:docs-update command for verified documentation generation (#1532)

2026-04-01 08:47:31 -06:00

execute-phase-active-flags.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

execute-phase-wave.test.cjs

test: add stale /gsd: colon reference regression guard (#1753)

2026-04-05 10:23:41 -04:00

execute-phase-worktree-artifacts.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

explore-command.test.cjs

feat(commands): add /gsd-explore for Socratic ideation and idea routing (#1813)

2026-04-05 18:33:27 -04:00

few-shot-calibration.test.cjs

docs(agents): add few-shot calibration examples for plan-checker and verifier (#1792)

2026-04-05 18:33:17 -04:00

forensics.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

frontmatter-cli.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

frontmatter.test.cjs

fix: resolve REG-04 — frontmatter inline array parser now respects quoted commas (#1695)

2026-04-04 15:50:01 -04:00

gates-taxonomy.test.cjs

feat(references): add gates taxonomy with 4 canonical gate types (#1781)

2026-04-06 15:19:46 -04:00

gsd-tools-path-refs.test.cjs

fix(commands): replace undefined $GSD_TOOLS with resolved path (#1766) (#1769)

2026-04-05 11:30:38 -04:00

hardcoded-paths.test.cjs

ci: drop Windows runner, add static hardcoded-path detection (#1676)

2026-04-04 14:37:54 -04:00

health-validation.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

helpers.cjs

fix: remove marketing text from runtime prompt, fix #1656 and #1657 (#1672)

2026-04-04 14:15:30 -04:00

hook-validation.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

hooks-opt-in.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

import-command.test.cjs

feat(commands): add external plan import command /gsd-import (#1801)

2026-04-05 18:33:24 -04:00

init-manager.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

init.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

install-hooks-copy.test.cjs

fix(install): preserve non-array hook entries during uninstall (#1824)

2026-04-05 23:07:59 -04:00

intel.test.cjs

feat(intel): add queryable codebase intelligence system (#1728)

2026-04-05 18:33:15 -04:00

kilo-install.test.cjs

feat: support CodeBuddy runtime (#1887)

2026-04-10 10:46:21 -04:00

learnings.test.cjs

feat(tools): add global learnings store with CRUD library and CLI support (#1831)

2026-04-05 19:09:14 -04:00

locking-bugs-1909-1916-1925-1927.test.cjs

fix(state): correct TOCTOU races, busy-wait, lock cleanup, and config locking (#1944)

2026-04-07 17:39:29 -04:00

mcp-tool-inheritance.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

methodology-artifact.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

milestone-regex-global.test.cjs

fix(milestone): replace test()+replace() with compare pattern to avoid global regex lastIndex bug (#1923)

2026-04-07 17:26:31 -04:00

milestone-summary.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

milestone.test.cjs

fix(milestone): preserve 999.x backlog phases during phases clear (#1858)

2026-04-06 08:54:18 -04:00

model-alias-map.test.cjs

test: add MODEL_ALIAS_MAP regression test for #1690 (#1698)

2026-04-04 15:52:13 -04:00

model-profiles.test.cjs

feat(model-profiles): add adaptive preset with role-based model assignment (#1806)

2026-04-05 17:03:17 -04:00

multi-runtime-select.test.cjs

feat: support CodeBuddy runtime (#1887)

2026-04-10 10:46:21 -04:00

new-milestone-clear-phases.test.cjs

fix(cli): require --confirm flag before phases clear deletes directories (#1832)

2026-04-05 18:05:32 -04:00

next-decimal-roadmap-scan.test.cjs

fix(phase): scan ROADMAP.md entries in next-decimal to prevent collisions (#1877)

2026-04-07 08:13:46 -04:00

next-safety-gates.test.cjs

feat(next): add hard stop safety gates and consecutive-call guard (#1784)

2026-04-05 17:05:06 -04:00

next-up-clear-order.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

opencode-permissions.test.cjs

merge: sync Kilo runtime branch with latest main

2026-04-03 12:47:24 +03:00

orphaned-hooks.test.cjs

fix: stale hooks scanner ignores orphaned files from removed features (#1751)

2026-04-05 09:15:19 -04:00

package-manifest.test.cjs

fix(package): include hooks/*.sh files in npm package (#1852 #1862) (#1864)

2026-04-06 15:13:23 -04:00

parallel-dependent-plans.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

path-replacement.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

pause-work-improvements.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

phase.test.cjs

fix(core): preserve letter suffix case in normalizePhaseName (#1963)

2026-04-10 10:48:00 -04:00

pick-flag.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

planner-decomposition.test.cjs

fix(agents): modular decomposition of gsd-planner.md to solve 50K char limit (#1612)

2026-04-03 13:32:05 -04:00

playwright-ui-verify.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

product-name-purity.test.cjs

fix: remove editorial parenthetical descriptions from product names (#1778)

2026-04-05 12:41:17 -04:00

profile-output.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

profile-pipeline.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

prompt-injection-scan.test.cjs

fix(tests): allowlist execute-phase.md in prompt-injection scan (#1835)

2026-04-05 20:03:47 -04:00

quick-branching.test.cjs

test: add stale /gsd: colon reference regression guard (#1753)

2026-04-05 10:23:41 -04:00

quick-commit-boundary.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

quick-research.test.cjs

test: add stale /gsd: colon reference regression guard (#1753)

2026-04-05 10:23:41 -04:00

reachability-check.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

read-guard.test.cjs

fix(hooks): skip read-guard advisory on Claude Code runtime (#2001)

2026-04-10 10:50:35 -04:00

reapply-patches.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

reapply-verify-hunks.test.cjs

enhance(reapply-patches): post-merge verification to catch dropped hunks (#1775)

2026-04-06 15:20:06 -04:00

review-model-config.test.cjs

feat(review): add per-CLI model selection via config (#1859)

2026-04-10 10:44:15 -04:00

roadmap-phase-fallback.test.cjs

fix(roadmap): fall back to full ROADMAP.md for backlog phases (#1640)

2026-04-04 07:14:24 -04:00

roadmap.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

runtime-converters.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

scan-command.test.cjs

feat(commands): add /gsd-scan for rapid single-focus codebase assessment (#1808)

2026-04-05 17:04:33 -04:00

schema-drift.test.cjs

feat: add schema drift detection to prevent false-positive verification

2026-04-01 16:53:20 -04:00

secure-phase.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

security-scan.test.cjs

fix: skip bash script behavioral tests on Windows

2026-03-24 13:33:58 -04:00

security.test.cjs

feat(security): improve prompt injection scanner — invisible Unicode, encoding obfuscation, structural validation, entropy analysis (#1839)

2026-04-05 20:22:52 -04:00

semver-compare.test.cjs

fix(hooks): use semver comparison for update check instead of inequality (#1617)

2026-04-04 07:10:21 -04:00

settings-jsonc.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

stale-colon-refs.test.cjs

feat: support CodeBuddy runtime (#1887)

2026-04-10 10:46:21 -04:00

state.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

subagent-timeout.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

template.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

thinking-model-guidance.test.cjs

fix(installer): guard .sh hook registration with fs.existsSync before writing settings.json (#1823)

2026-04-05 17:49:20 -04:00

thinking-partner.test.cjs

feat(workflows): add conditional thinking partner at decision points (#1816)

2026-04-05 17:04:08 -04:00

trae-install.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

uat.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

verification-overrides.test.cjs

feat(references): add verification override mechanism reference (#1747) (#1819)

2026-04-05 17:00:30 -04:00

verifier-deferred-items.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

verify-health.test.cjs

fix(verify): suppress W006 for phases with unchecked ROADMAP summary checkbox (#2009) (#2027)

2026-04-10 11:03:10 -04:00

verify-test-quality.test.cjs

feat: add test quality audit step to verify-phase workflow

2026-04-02 18:55:17 -03:00

verify.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

windows-robustness.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

windsurf-conversion.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

windsurf-install.test.cjs

fix: use ~/.codeium/windsurf as Windsurf global config dir (#1856)

2026-04-06 08:40:37 -04:00

workflow-compat.test.cjs

fix(workflows): remove deprecated --no-input flag from claude CLI calls (#1759) (#1842)

2026-04-05 22:54:12 -04:00

workflow-guard-registration.test.cjs

fix: register gsd-workflow-guard.js in settings.json during install (#1772)

2026-04-05 12:30:24 -04:00

workspace.test.cjs

test: add stale /gsd: colon reference regression guard (#1753)

2026-04-05 10:23:41 -04:00

workstream.test.cjs

fix: harden workstream session routing fallback

2026-04-02 21:36:36 -05:00

worktree-cleanup.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00

worktree-merge-protection.test.cjs

fix(workflow): protect orchestrator files during worktree merge (#1756) (#1764)

2026-04-05 11:11:38 -04:00

worktree-stagger.test.cjs

refactor(tests): standardize to node:assert/strict and t.after() per CONTRIBUTING.md (#1675)

2026-04-04 14:29:03 -04:00